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The map label for this gene is asnC [C]

Identifier: 193212417

GI number: 193212417

Start: 810549

End: 811073

Strand: Direct

Name: asnC [C]

Synonym: Cpar_0753

Alternate gene names: 193212417

Gene position: 810549-811073 (Clockwise)

Preceding gene: 193212411

Following gene: 193212418

Centisome position: 35.41

GC content: 52.95

Gene sequence:

>525_bases
ATGTCCGGACACCTCGACCTTATCGATCTGAAAATCATCGAATCACTCGGTGGTAACGGCAGAGTGCGGCTCAGCGAGCT
TGCTGAAATCGTTGGATTGTCGATTCCATCGGTCAGCGAGCGGCTCGACAAATTGCAGAAGAACGGTATCATCAAAGGGT
TTACGACGGAGGTCGACGAGCGCAGGCTCGGTTTCGATATTCAGGCGTTTGTGCGGGTGCGGGTTGATTCCTCGAAGCAC
TACAAGTCCTTCATGGAGCATGTCATGAAGGAGGAGGAGATCATGGAGTGCTACTCGGTGACCGGCGAGGGATCGCATAT
CATGAAGGTGATGACGCACAATACCGCATCGCTCGAACAGTTCCTGTCGCGCATCCAGAGCTGGCCGGGAGTGCTGGGCA
CCAATACGAGCTTCGTTCTGTCGCAGCTGAAAAAGAACAACTGCATCAGCGCGGATATCGTGAAGAAGAACCTGCAGGAC
AGGCAGGTGCTGCTCACCTTCGATGAAAAGAAATCAAGAAAATAG

Upstream 100 bases:

>100_bases
ATTATTTAGGGAAAGTGCTGGTCAAATCCGCCTTTATTAAGAATAGGCTTGTTTATTTCTTAGATTTCATTAATTTCCTA
CAAAATCGAAGATTCTGCTT

Downstream 100 bases:

>100_bases
TATCAGTTCGTGTTCATCTATCATGTTTAAAAACAAGTAAAGGAGGAACTCTTGATTAACGAGAGCAAAAAATCGGTGGT
GTCCTATTATGGCGCATTGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSGHLDLIDLKIIESLGGNGRVRLSELAEIVGLSIPSVSERLDKLQKNGIIKGFTTEVDERRLGFDIQAFVRVRVDSSKH
YKSFMEHVMKEEEIMECYSVTGEGSHIMKVMTHNTASLEQFLSRIQSWPGVLGTNTSFVLSQLKKNNCISADIVKKNLQD
RQVLLTFDEKKSRK

Sequences:

>Translated_174_residues
MSGHLDLIDLKIIESLGGNGRVRLSELAEIVGLSIPSVSERLDKLQKNGIIKGFTTEVDERRLGFDIQAFVRVRVDSSKH
YKSFMEHVMKEEEIMECYSVTGEGSHIMKVMTHNTASLEQFLSRIQSWPGVLGTNTSFVLSQLKKNNCISADIVKKNLQD
RQVLLTFDEKKSRK
>Mature_173_residues
SGHLDLIDLKIIESLGGNGRVRLSELAEIVGLSIPSVSERLDKLQKNGIIKGFTTEVDERRLGFDIQAFVRVRVDSSKHY
KSFMEHVMKEEEIMECYSVTGEGSHIMKVMTHNTASLEQFLSRIQSWPGVLGTNTSFVLSQLKKNNCISADIVKKNLQDR
QVLLTFDEKKSRK

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=137, Percent_Identity=32.8467153284672, Blast_Score=80, Evalue=6e-17,
Organism=Escherichia coli, GI1787116, Length=146, Percent_Identity=30.1369863013699, Blast_Score=73, Evalue=9e-15,
Organism=Escherichia coli, GI87081742, Length=149, Percent_Identity=28.1879194630872, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19699; Mature: 19568

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHLDLIDLKIIESLGGNGRVRLSELAEIVGLSIPSVSERLDKLQKNGIIKGFTTEVDE
CCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
RRLGFDIQAFVRVRVDSSKHYKSFMEHVMKEEEIMECYSVTGEGSHIMKVMTHNTASLEQ
HHCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
FLSRIQSWPGVLGTNTSFVLSQLKKNNCISADIVKKNLQDRQVLLTFDEKKSRK
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SGHLDLIDLKIIESLGGNGRVRLSELAEIVGLSIPSVSERLDKLQKNGIIKGFTTEVDE
CCCCHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
RRLGFDIQAFVRVRVDSSKHYKSFMEHVMKEEEIMECYSVTGEGSHIMKVMTHNTASLEQ
HHCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH
FLSRIQSWPGVLGTNTSFVLSQLKKNNCISADIVKKNLQDRQVLLTFDEKKSRK
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA