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The map label for this gene is yfmR [H]

Identifier: 193212379

GI number: 193212379

Start: 762585

End: 764489

Strand: Direct

Name: yfmR [H]

Synonym: Cpar_0712

Alternate gene names: 193212379

Gene position: 762585-764489 (Clockwise)

Preceding gene: 193212378

Following gene: 193212380

Centisome position: 33.31

GC content: 61.94

Gene sequence:

>1905_bases
ATGGTTCTTCTGACGGTCGAGGGGATTGGCAAGACGTACGGGTTGAAAACGCTGTTCACGGATGTGTCGTTCGGCATCGA
TGACCGCGACAAGGTGGGCATCATCGGCGCGAACGGCAGTGGCAAGAGTACGCTGATGAAAATTCTGGCCGGCAGCGAGA
CGCCCGACACCGGGAGGGTGATGGTGTCGAAGGAAAAGAAAATCTCCTACCTGCCGCAGGTCTCGCCGTACGACGCGGAC
GATACCGTGCTCGAAGCGGTGCTGAAGTCGGGCGATAAAGTCATGGCGCTGATCTGCGAGTACGAACTGGCTCTTGAGGC
GCTCGACCATGCAGACGGTGACCAGACCGCGCTGATCGAGAAGGTGACGCACCTGTCGCATGAACTCGACGTGAAGGGCG
CGTGGGAGCTGGAGTCGAACGCCAAGGCGGTGCTCGGCAAGCTCGGCCTGAACGATCTGACGGCGAAAATGGGCACGCTC
TCCGGCGGCCAGCGCAAGCGCGTCGCGCTCGCCCACGCCCTTGTGGTGCCGAGCGACGCGCTGATTCTCGACGAGCCGAC
CAACCACCTCGATGCCGACAGCGTCGAGTGGCTCGAAAGCTACATCCGCCGCTACGCCGGGGCGGTGATTCTCATCACGC
ACGACCGCTACTTCCTCGACCGCGTTGCCACCCGTATGATCGAACTGGACGGCAAAACGGCCAAAACCTACACCGGCGGC
TACGCGAGCTACCTCGTTCAGAAGGAGGAAGAGGAGGCGCAGGAGATTCGCGACGAGTGCAAGCGCAACGCACTCGCCAA
GCAGGAACTCGAATGGATGCGCACCGGCGCTAAGGCCCGCACCACCAAACAGAAAGCGCGCTTGCAGCGAGCCGAAACGC
TGGTCTATGCGCCGAAAAAAGAGCAGAAACAGGAGATGGAGATCGGCTTCGGCGCGGAACGGCTCGGCAACAAGATCGTC
GAGTTTCACGACGTCTCGAAATCGTGGGGCGAGAAGAAGCTGCTTCGCTCGTTCGACTACCTGCTCGAAAAGGGCGACCG
CATCGGCATCATCGGCCCGAACGGTTCCGGCAAGACCACGCTGCTCGAAATGATCGCCGGACGCACGAAGCCCGACAGCG
GGCGCATCGAGATCGGCCCGACGGTCAAAATCGGCTACTACGATCAGGAAAGCCGTTACCTCGACGACGAAAAGCGCGTC
ATCGAGTACATCAAGGAGGAGGCCGAGCAGATCAAAACGAAGGACGGCACGCTGGTCTCGGCGGCCAAAATGCTTGAACG
GTTCCTCTTCGCCCCGTCGGCGCAGTACAATCCCATCGGCAACCTCTCCGGCGGCGAGCGGCGGCGGCTCTACCTGCTGC
GTCAGCTCATCGGAGCACCGAACGTGCTCCTGCTCGACGAGCCGACCAACGACCTCGACATCCCCACCCTGCGCGTGCTC
GAAGACTACCTCGACACCTTTCCGGGGTGCCTCGTCGTCGTCAGCCACGACCGCTACTTCCTCGACCGCACCGTCGAGCA
CATTTTCGCCTTCGAGGGCGACGGCATTGTGCGCCGCTATCCAGGCAACTACAGCGTCTATCTCGAAATGAAAGCCGCCA
CCGCTGCCGAAGAGCAGGCCGCCAAGCCCAAGCCCGCGCCCGCCGCAAAACCCGCGTCCGAGTCGCCGAAGCCGACATCA
TCGCCCAAGCAGCGCAAACTCAACAGCAAGGAGAAGCGCGAACTTGAGCAACTCGAGCAGGCCATCGCCGAAGCCGAAGA
GCGTCAGGAAGCGATCAACGCCGAACTCTCCGCCGCCGGTTCTGACTTCGAGGCGGTACAAAGGCTGGGTGACGAACTGC
ACAAGATTCAGGAGAAGCTCGAAAGCGACATGGAGCGCTGGGGCGAGTTGGCAGAGCTGGCGTGA

Upstream 100 bases:

>100_bases
CGAGTGAAACGGTGATCGATGCTTGATTGCGCAGGAGCAGGGGAATCGGTGGGCATTTGCGTTATATTGAATCCTTTTTT
AGCGCTAAACAGGATGGGGC

Downstream 100 bases:

>100_bases
CGGGAAGCGTGGACGGCGTGGACGGGAAATGAAACGGTGTCGTAGGGGCGAACCTGTGTGTTCGCCCTTGCGGGAGATTA
CCGGGAATTTGTAGGGGCAA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MVLLTVEGIGKTYGLKTLFTDVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRVMVSKEKKISYLPQVSPYDAD
DTVLEAVLKSGDKVMALICEYELALEALDHADGDQTALIEKVTHLSHELDVKGAWELESNAKAVLGKLGLNDLTAKMGTL
SGGQRKRVALAHALVVPSDALILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
YASYLVQKEEEEAQEIRDECKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKKEQKQEMEIGFGAERLGNKIV
EFHDVSKSWGEKKLLRSFDYLLEKGDRIGIIGPNGSGKTTLLEMIAGRTKPDSGRIEIGPTVKIGYYDQESRYLDDEKRV
IEYIKEEAEQIKTKDGTLVSAAKMLERFLFAPSAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAATAAEEQAAKPKPAPAAKPASESPKPTS
SPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELSAAGSDFEAVQRLGDELHKIQEKLESDMERWGELAELA

Sequences:

>Translated_634_residues
MVLLTVEGIGKTYGLKTLFTDVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRVMVSKEKKISYLPQVSPYDAD
DTVLEAVLKSGDKVMALICEYELALEALDHADGDQTALIEKVTHLSHELDVKGAWELESNAKAVLGKLGLNDLTAKMGTL
SGGQRKRVALAHALVVPSDALILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
YASYLVQKEEEEAQEIRDECKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKKEQKQEMEIGFGAERLGNKIV
EFHDVSKSWGEKKLLRSFDYLLEKGDRIGIIGPNGSGKTTLLEMIAGRTKPDSGRIEIGPTVKIGYYDQESRYLDDEKRV
IEYIKEEAEQIKTKDGTLVSAAKMLERFLFAPSAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAATAAEEQAAKPKPAPAAKPASESPKPTS
SPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELSAAGSDFEAVQRLGDELHKIQEKLESDMERWGELAELA
>Mature_634_residues
MVLLTVEGIGKTYGLKTLFTDVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRVMVSKEKKISYLPQVSPYDAD
DTVLEAVLKSGDKVMALICEYELALEALDHADGDQTALIEKVTHLSHELDVKGAWELESNAKAVLGKLGLNDLTAKMGTL
SGGQRKRVALAHALVVPSDALILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
YASYLVQKEEEEAQEIRDECKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKKEQKQEMEIGFGAERLGNKIV
EFHDVSKSWGEKKLLRSFDYLLEKGDRIGIIGPNGSGKTTLLEMIAGRTKPDSGRIEIGPTVKIGYYDQESRYLDDEKRV
IEYIKEEAEQIKTKDGTLVSAAKMLERFLFAPSAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAATAAEEQAAKPKPAPAAKPASESPKPTS
SPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELSAAGSDFEAVQRLGDELHKIQEKLESDMERWGELAELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=548, Percent_Identity=29.7445255474453, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI27881506, Length=548, Percent_Identity=29.7445255474453, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI148612853, Length=557, Percent_Identity=28.1867145421903, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI10947135, Length=537, Percent_Identity=29.2364990689013, Blast_Score=182, Evalue=9e-46,
Organism=Homo sapiens, GI69354671, Length=537, Percent_Identity=29.2364990689013, Blast_Score=182, Evalue=1e-45,
Organism=Homo sapiens, GI27477115, Length=144, Percent_Identity=31.25, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI27436953, Length=152, Percent_Identity=32.2368421052632, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI46592964, Length=185, Percent_Identity=31.8918918918919, Blast_Score=67, Evalue=8e-11,
Organism=Homo sapiens, GI46592915, Length=205, Percent_Identity=31.219512195122, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI46592956, Length=205, Percent_Identity=31.219512195122, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI46592898, Length=185, Percent_Identity=31.8918918918919, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI46592978, Length=185, Percent_Identity=31.8918918918919, Blast_Score=66, Evalue=9e-11,
Organism=Homo sapiens, GI46592971, Length=185, Percent_Identity=31.8918918918919, Blast_Score=66, Evalue=1e-10,
Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=41.0488245931284, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1787182, Length=646, Percent_Identity=34.6749226006192, Blast_Score=348, Evalue=6e-97,
Organism=Escherichia coli, GI1789751, Length=608, Percent_Identity=32.0723684210526, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=30.7407407407407, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1788165, Length=231, Percent_Identity=27.7056277056277, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87081834, Length=240, Percent_Identity=30.4166666666667, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1788210, Length=500, Percent_Identity=23.4, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=29.9065420560748, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1786698, Length=163, Percent_Identity=31.9018404907975, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788761, Length=203, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787370, Length=200, Percent_Identity=28, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787712, Length=164, Percent_Identity=29.2682926829268, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=28.2296650717703, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI87081782, Length=183, Percent_Identity=31.1475409836066, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=525, Percent_Identity=28.952380952381, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17553372, Length=542, Percent_Identity=29.8892988929889, Blast_Score=186, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17555318, Length=538, Percent_Identity=27.6951672862454, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI193202349, Length=221, Percent_Identity=29.8642533936652, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=528, Percent_Identity=31.25, Blast_Score=217, Evalue=6e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=544, Percent_Identity=27.7573529411765, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=26.5625, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=25.5154639175258, Blast_Score=113, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=215, Percent_Identity=34.4186046511628, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24642252, Length=550, Percent_Identity=28.1818181818182, Blast_Score=198, Evalue=7e-51,
Organism=Drosophila melanogaster, GI18859989, Length=550, Percent_Identity=28.1818181818182, Blast_Score=198, Evalue=7e-51,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=28.2809611829945, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=26.9662921348315, Blast_Score=179, Evalue=6e-45,
Organism=Drosophila melanogaster, GI28574259, Length=228, Percent_Identity=27.6315789473684, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70573; Mature: 70573

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLTVEGIGKTYGLKTLFTDVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRV
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCE
MVSKEKKISYLPQVSPYDADDTVLEAVLKSGDKVMALICEYELALEALDHADGDQTALIE
EEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHH
KVTHLSHELDVKGAWELESNAKAVLGKLGLNDLTAKMGTLSGGQRKRVALAHALVVPSDA
HHHHHHHHCCCCCCEEECCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
LILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCH
YASYLVQKEEEEAQEIRDECKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKK
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCH
EQKQEMEIGFGAERLGNKIVEFHDVSKSWGEKKLLRSFDYLLEKGDRIGIIGPNGSGKTT
HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
LLEMIAGRTKPDSGRIEIGPTVKIGYYDQESRYLDDEKRVIEYIKEEAEQIKTKDGTLVS
HHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AAKMLERFLFAPSAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAATAAEEQA
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECHHHHHHHC
AKPKPAPAAKPASESPKPTSSPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELSAAG
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDFEAVQRLGDELHKIQEKLESDMERWGELAELA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLLTVEGIGKTYGLKTLFTDVSFGIDDRDKVGIIGANGSGKSTLMKILAGSETPDTGRV
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCE
MVSKEKKISYLPQVSPYDADDTVLEAVLKSGDKVMALICEYELALEALDHADGDQTALIE
EEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHH
KVTHLSHELDVKGAWELESNAKAVLGKLGLNDLTAKMGTLSGGQRKRVALAHALVVPSDA
HHHHHHHHCCCCCCEEECCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
LILDEPTNHLDADSVEWLESYIRRYAGAVILITHDRYFLDRVATRMIELDGKTAKTYTGG
EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCH
YASYLVQKEEEEAQEIRDECKRNALAKQELEWMRTGAKARTTKQKARLQRAETLVYAPKK
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCH
EQKQEMEIGFGAERLGNKIVEFHDVSKSWGEKKLLRSFDYLLEKGDRIGIIGPNGSGKTT
HHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
LLEMIAGRTKPDSGRIEIGPTVKIGYYDQESRYLDDEKRVIEYIKEEAEQIKTKDGTLVS
HHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AAKMLERFLFAPSAQYNPIGNLSGGERRRLYLLRQLIGAPNVLLLDEPTNDLDIPTLRVL
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
EDYLDTFPGCLVVVSHDRYFLDRTVEHIFAFEGDGIVRRYPGNYSVYLEMKAATAAEEQA
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEECHHHHHHHC
AKPKPAPAAKPASESPKPTSSPKQRKLNSKEKRELEQLEQAIAEAEERQEAINAELSAAG
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SDFEAVQRLGDELHKIQEKLESDMERWGELAELA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]