Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

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The map label for this gene is pheT [H]

Identifier: 193212364

GI number: 193212364

Start: 747484

End: 749916

Strand: Direct

Name: pheT [H]

Synonym: Cpar_0697

Alternate gene names: 193212364

Gene position: 747484-749916 (Clockwise)

Preceding gene: 193212363

Following gene: 193212365

Centisome position: 32.65

GC content: 56.56

Gene sequence:

>2433_bases
ATGAAAATCTCCGTCAACTGGCTCAAAGAGTTCATTCCCTCGTTTTCATCCGATACTTCCGAACTTGTCGATCGACTGAC
CTATCTCGGCCTGGAGGTCGAGGAGGTTTTCGAGCAGAAGCTGCCCGATCCGAAGGTGATTGTCGGAAAGGTGGCCGAGG
TGCGGCAGCATCCCAACGCTGACCGTCTTCGCATCTGCATGGTCGATACCGGAGAGCCCGAGCTTCAGCAGATTGTCTGC
GGCGCACCTAACGTCGAAGAGGGAATGGTCGTTCCGGTGGCGACGATCGGAGCGGTGCTGACATCAGGTGACGAGAGCTT
CACCATCAAACCGGCAAAGATTCGCGGCGAACGTTCGTTCGGCATGATCTGCGCGGCTGACGAGCTTGGCCTGTCGGACG
ACCACGACGGCGTGATGGTGCTTGACGAGGCGTGCGAGGTGGGTAAGCCGCTTGCCGACTATCTCGAAACCGACACGGTG
CTCGACATAGCCGTGACGCCGAACCGTTCCGATGCTCTGTCGCATCTTGGTGTGGCCCGCGAGTTGGCCGATTGCCACGA
GATCGTCTTTCCCCAGGCGCCGGTGATTGAGTTCACCCGTGGCGGTGGACTGGTGGAGGTGCAGGACGAGGACGCCTGTC
CCTACTATTCAGCAACCGTTATCCGGGGTGTGACCGTTGGGCCTTCTCCCCGCTGGCTTGCCCGGCGTCTCGAACAGATT
GGTCTGCGTCCGAAAAACAACATTGTTGACATTACCAACTACATTCTCCACTCGTTCGGCCAGCCGCTGCATGCTTTTGA
TATGCACCGCCTTGCCGGAAGCCGTATCGTGGTGCGCAGCGATGCTGAAAGCTCCTTCATGGCGCTGAATCAGGAGGAGT
ATAAGTTGCAGCCCGGCATGGCGGCTATCTGCGATTCCCGGGAGCCTGTGGCCGTCGGCGGCGTTATGGGCGGCCTTTAT
TCGGCTGTGACCGAAAAGACCACCGATATTCTGCTCGAAGCGGCCTATTTCAACCCTGCCTCGATCCGGAAGACCGCCAA
GCTCCTCCAGCTCTCTACCGACTCCTCATACCGTTACGAGCGGGGTATTGATCCGTGCAACGTCAAGCGAGTGGCCGAAT
ACGCCATTGCGATGATTCTTGAAATCGCCGGCGGCAAGGTTGAAACCGCTGAGGCGTGGGGTAGCATGCCTTCGACCCAG
AAGATCGTCAATCTTCGCCCGAAGCGCGCCAACGCGGTGCTCGGCAGCTCGATTACCGCTTCCGAAATGATGCGTCTGCT
CGAAAAAATCTGCATCAAGGCGGTTTCGCAGGGCGCCGTGTCGAACGATGCCGACCAGATCGCTTTTGCAGTGCCCTCGC
ACCGGGTGGACATCGAACAGGAGATCGATCTCATCGAAGAGGTCGCACGCCTGTATGGTTATAACAACCTCGAACCTTCG
TCCGCGATGGTTTCCAGCTATCCGGTTTCGCGCAAGATCCCCGAGTATTTCCCCGATTACCTGCGCAATATCATGATCGG
CCTCAACTTCAGGGAGGTGCTCACCAATCCGCTTATCAGAAAAGCTGAAGCGAGTTGTTTCAGTGACCAGCCGGTCAGTG
CCCTGAATCCGATCAGCGAAGAGCTCGAAGTGCTTCGACCCTGCCTTGCTCCTTCACTGCTCAGGATCGTCGGCCACAAC
ATCCGTCACGGCAATCGCGACCTTCGCCTGTTCGAGGTTGCACACGGATTCGAGATGCTGCCGGAAGCCGAGCGCAGTGG
TTCCGGACCACTTGCAAAGTATCGTGAACGCGAGCTGCTCTCGATGGTCATCACCGGGCGTCGAGAGCCACGAAGCTGGA
ACCATTCCGGCGAAGAGGTCGATTTTTACGATCTCCGGGGTGTGGTCGAGATGTTGCTTGAGAAGCTGAATTTACTTGAT
AAATCAGCACTTAATATTTATAATGCCAACACGATTGGTATTGAAATCACATCGGCCGAAAACGGAAACAGCCCGGCTCT
GAAAGCCGGAACGGTTCAGCAGGTCAGCAAAGAAGTGCTCGCCGCCTTTGATCTCGATCAGGATGTTTTTCTTGCTGAAA
TCGATGTTTCCGTACTGGAGCGCTGCTTCGAGTCCGGCGTGGTTTATGAACCGCCGTCGAAGTTTCCTGTCGTCGAAAGA
GACCTGTCATTTGCTCTTCCCCGACATATTCCGGCACAGCGCCTGGTCGATCTGGCAACAGAGAGCGATCCGCTGGTCAG
GTCCGTGCGCATCTTCGATGTGTTTGACCGCGGCGAGTCCGGAGGCCATGGGCAGGCCGAACGCAGTGTAGCGATTTCGC
TTGAGCTTGCCGACAGAACAGGAACGATGAACGAGGAAACGATCAACGCTGTTGTTCAGAAAGTGAGTGACAATGCCAAG
AGTGAACTTGGTGCGGAAATCAGGCAAGTTTGA

Upstream 100 bases:

>100_bases
TTCCTGATCATTGGTGTCCCGCCTGTTTAGCCCGCAGACCGTTGCCGATGATTGTTCAGGGATTCCCGTTTATGAACGCA
CTGACTGTAATAACCGGCCC

Downstream 100 bases:

>100_bases
GCCATTTCAGCCATGGATGCAATAGATGAGCATAATGGTCATGACCTGCTGGCTGGTCTCGAAGAGAACGTTGCGAGGCT
TGTCGAGCAGTTGACGGAGT

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 810; Mature: 810

Protein sequence:

>810_residues
MKISVNWLKEFIPSFSSDTSELVDRLTYLGLEVEEVFEQKLPDPKVIVGKVAEVRQHPNADRLRICMVDTGEPELQQIVC
GAPNVEEGMVVPVATIGAVLTSGDESFTIKPAKIRGERSFGMICAADELGLSDDHDGVMVLDEACEVGKPLADYLETDTV
LDIAVTPNRSDALSHLGVARELADCHEIVFPQAPVIEFTRGGGLVEVQDEDACPYYSATVIRGVTVGPSPRWLARRLEQI
GLRPKNNIVDITNYILHSFGQPLHAFDMHRLAGSRIVVRSDAESSFMALNQEEYKLQPGMAAICDSREPVAVGGVMGGLY
SAVTEKTTDILLEAAYFNPASIRKTAKLLQLSTDSSYRYERGIDPCNVKRVAEYAIAMILEIAGGKVETAEAWGSMPSTQ
KIVNLRPKRANAVLGSSITASEMMRLLEKICIKAVSQGAVSNDADQIAFAVPSHRVDIEQEIDLIEEVARLYGYNNLEPS
SAMVSSYPVSRKIPEYFPDYLRNIMIGLNFREVLTNPLIRKAEASCFSDQPVSALNPISEELEVLRPCLAPSLLRIVGHN
IRHGNRDLRLFEVAHGFEMLPEAERSGSGPLAKYRERELLSMVITGRREPRSWNHSGEEVDFYDLRGVVEMLLEKLNLLD
KSALNIYNANTIGIEITSAENGNSPALKAGTVQQVSKEVLAAFDLDQDVFLAEIDVSVLERCFESGVVYEPPSKFPVVER
DLSFALPRHIPAQRLVDLATESDPLVRSVRIFDVFDRGESGGHGQAERSVAISLELADRTGTMNEETINAVVQKVSDNAK
SELGAEIRQV

Sequences:

>Translated_810_residues
MKISVNWLKEFIPSFSSDTSELVDRLTYLGLEVEEVFEQKLPDPKVIVGKVAEVRQHPNADRLRICMVDTGEPELQQIVC
GAPNVEEGMVVPVATIGAVLTSGDESFTIKPAKIRGERSFGMICAADELGLSDDHDGVMVLDEACEVGKPLADYLETDTV
LDIAVTPNRSDALSHLGVARELADCHEIVFPQAPVIEFTRGGGLVEVQDEDACPYYSATVIRGVTVGPSPRWLARRLEQI
GLRPKNNIVDITNYILHSFGQPLHAFDMHRLAGSRIVVRSDAESSFMALNQEEYKLQPGMAAICDSREPVAVGGVMGGLY
SAVTEKTTDILLEAAYFNPASIRKTAKLLQLSTDSSYRYERGIDPCNVKRVAEYAIAMILEIAGGKVETAEAWGSMPSTQ
KIVNLRPKRANAVLGSSITASEMMRLLEKICIKAVSQGAVSNDADQIAFAVPSHRVDIEQEIDLIEEVARLYGYNNLEPS
SAMVSSYPVSRKIPEYFPDYLRNIMIGLNFREVLTNPLIRKAEASCFSDQPVSALNPISEELEVLRPCLAPSLLRIVGHN
IRHGNRDLRLFEVAHGFEMLPEAERSGSGPLAKYRERELLSMVITGRREPRSWNHSGEEVDFYDLRGVVEMLLEKLNLLD
KSALNIYNANTIGIEITSAENGNSPALKAGTVQQVSKEVLAAFDLDQDVFLAEIDVSVLERCFESGVVYEPPSKFPVVER
DLSFALPRHIPAQRLVDLATESDPLVRSVRIFDVFDRGESGGHGQAERSVAISLELADRTGTMNEETINAVVQKVSDNAK
SELGAEIRQV
>Mature_810_residues
MKISVNWLKEFIPSFSSDTSELVDRLTYLGLEVEEVFEQKLPDPKVIVGKVAEVRQHPNADRLRICMVDTGEPELQQIVC
GAPNVEEGMVVPVATIGAVLTSGDESFTIKPAKIRGERSFGMICAADELGLSDDHDGVMVLDEACEVGKPLADYLETDTV
LDIAVTPNRSDALSHLGVARELADCHEIVFPQAPVIEFTRGGGLVEVQDEDACPYYSATVIRGVTVGPSPRWLARRLEQI
GLRPKNNIVDITNYILHSFGQPLHAFDMHRLAGSRIVVRSDAESSFMALNQEEYKLQPGMAAICDSREPVAVGGVMGGLY
SAVTEKTTDILLEAAYFNPASIRKTAKLLQLSTDSSYRYERGIDPCNVKRVAEYAIAMILEIAGGKVETAEAWGSMPSTQ
KIVNLRPKRANAVLGSSITASEMMRLLEKICIKAVSQGAVSNDADQIAFAVPSHRVDIEQEIDLIEEVARLYGYNNLEPS
SAMVSSYPVSRKIPEYFPDYLRNIMIGLNFREVLTNPLIRKAEASCFSDQPVSALNPISEELEVLRPCLAPSLLRIVGHN
IRHGNRDLRLFEVAHGFEMLPEAERSGSGPLAKYRERELLSMVITGRREPRSWNHSGEEVDFYDLRGVVEMLLEKLNLLD
KSALNIYNANTIGIEITSAENGNSPALKAGTVQQVSKEVLAAFDLDQDVFLAEIDVSVLERCFESGVVYEPPSKFPVVER
DLSFALPRHIPAQRLVDLATESDPLVRSVRIFDVFDRGESGGHGQAERSVAISLELADRTGTMNEETINAVVQKVSDNAK
SELGAEIRQV

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788006, Length=834, Percent_Identity=33.6930455635492, Blast_Score=379, Evalue=1e-106,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 89155; Mature: 89155

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISVNWLKEFIPSFSSDTSELVDRLTYLGLEVEEVFEQKLPDPKVIVGKVAEVRQHPNA
CEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
DRLRICMVDTGEPELQQIVCGAPNVEEGMVVPVATIGAVLTSGDESFTIKPAKIRGERSF
CCEEEEEEECCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCCCCCEEEEHHHCCCCCCC
GMICAADELGLSDDHDGVMVLDEACEVGKPLADYLETDTVLDIAVTPNRSDALSHLGVAR
CEEEEECCCCCCCCCCCEEEEHHHHHCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
ELADCHEIVFPQAPVIEFTRGGGLVEVQDEDACPYYSATVIRGVTVGPSPRWLARRLEQI
HHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHH
GLRPKNNIVDITNYILHSFGQPLHAFDMHRLAGSRIVVRSDAESSFMALNQEEYKLQPGM
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHEECCCH
AAICDSREPVAVGGVMGGLYSAVTEKTTDILLEAAYFNPASIRKTAKLLQLSTDSSYRYE
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
RGIDPCNVKRVAEYAIAMILEIAGGKVETAEAWGSMPSTQKIVNLRPKRANAVLGSSITA
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCH
SEMMRLLEKICIKAVSQGAVSNDADQIAFAVPSHRVDIEQEIDLIEEVARLYGYNNLEPS
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SAMVSSYPVSRKIPEYFPDYLRNIMIGLNFREVLTNPLIRKAEASCFSDQPVSALNPISE
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCHHHCHHHH
ELEVLRPCLAPSLLRIVGHNIRHGNRDLRLFEVAHGFEMLPEAERSGSGPLAKYRERELL
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCHHHCCCHHCCCCCCHHHHHHHHHH
SMVITGRREPRSWNHSGEEVDFYDLRGVVEMLLEKLNLLDKSALNIYNANTIGIEITSAE
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCC
NGNSPALKAGTVQQVSKEVLAAFDLDQDVFLAEIDVSVLERCFESGVVYEPPSKFPVVER
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHCHHHHHHHHHCCCEECCCCCCCCCCC
DLSFALPRHIPAQRLVDLATESDPLVRSVRIFDVFDRGESGGHGQAERSVAISLELADRT
CHHHHCCCCCCHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEEEECCC
GTMNEETINAVVQKVSDNAKSELGAEIRQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISVNWLKEFIPSFSSDTSELVDRLTYLGLEVEEVFEQKLPDPKVIVGKVAEVRQHPNA
CEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
DRLRICMVDTGEPELQQIVCGAPNVEEGMVVPVATIGAVLTSGDESFTIKPAKIRGERSF
CCEEEEEEECCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCCCCCEEEEHHHCCCCCCC
GMICAADELGLSDDHDGVMVLDEACEVGKPLADYLETDTVLDIAVTPNRSDALSHLGVAR
CEEEEECCCCCCCCCCCEEEEHHHHHCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH
ELADCHEIVFPQAPVIEFTRGGGLVEVQDEDACPYYSATVIRGVTVGPSPRWLARRLEQI
HHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHH
GLRPKNNIVDITNYILHSFGQPLHAFDMHRLAGSRIVVRSDAESSFMALNQEEYKLQPGM
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHCCCCHHHEECCCH
AAICDSREPVAVGGVMGGLYSAVTEKTTDILLEAAYFNPASIRKTAKLLQLSTDSSYRYE
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
RGIDPCNVKRVAEYAIAMILEIAGGKVETAEAWGSMPSTQKIVNLRPKRANAVLGSSITA
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCHHHHHCCCCHHHHHHCCCCCH
SEMMRLLEKICIKAVSQGAVSNDADQIAFAVPSHRVDIEQEIDLIEEVARLYGYNNLEPS
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SAMVSSYPVSRKIPEYFPDYLRNIMIGLNFREVLTNPLIRKAEASCFSDQPVSALNPISE
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCCHHHCHHHH
ELEVLRPCLAPSLLRIVGHNIRHGNRDLRLFEVAHGFEMLPEAERSGSGPLAKYRERELL
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCHHHCCCHHCCCCCCHHHHHHHHHH
SMVITGRREPRSWNHSGEEVDFYDLRGVVEMLLEKLNLLDKSALNIYNANTIGIEITSAE
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCC
NGNSPALKAGTVQQVSKEVLAAFDLDQDVFLAEIDVSVLERCFESGVVYEPPSKFPVVER
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEHHCHHHHHHHHHCCCEECCCCCCCCCCC
DLSFALPRHIPAQRLVDLATESDPLVRSVRIFDVFDRGESGGHGQAERSVAISLELADRT
CHHHHCCCCCCHHHHHHHHCCCCHHHHHEEEEEEECCCCCCCCCCCCCEEEEEEEEECCC
GTMNEETINAVVQKVSDNAKSELGAEIRQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]