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The map label for this gene is 193212358

Identifier: 193212358

GI number: 193212358

Start: 738635

End: 739147

Strand: Direct

Name: 193212358

Synonym: Cpar_0691

Alternate gene names: NA

Gene position: 738635-739147 (Clockwise)

Preceding gene: 193212357

Following gene: 193212360

Centisome position: 32.27

GC content: 57.12

Gene sequence:

>513_bases
ATGTTGCTGCATAAAGCCAAAGTCCTGGTGCTCAATGCGAGCTACGAGCCTCTGAGCATCTGCGATGCGAGGAATGCCGT
GCTGCTGCTTTTTGGCGGCAAGGCCATGGTGGTGGCAAGCCATCCGGAGCATCGTATTCGCACGGTCAGCGAGAGCTTTC
CGCTGCCGAGCATCGTGCGCCTGACAGTGTACGTTCGGGTGGAGTATCGCCACGCGGTGCTGAGCCGGAAAAACATCTTC
AGGCGGGACGGCTACCGCTGTCAGTACTGCGGCAGAAATGACCTTCAGTTGACGCTTGATCACGTCATTCCGAAGTCCAG
AGGCGGGGAAGACCGGTGGGATAACCTGATTACAGCCTGCAAACCGTGCAATACGCTCAAGGGCAACCGGACGCCGACCG
AGGCAGGTATGACCATGTTGCAGAAACCATTCCGACCGAGCCACATCGCCCTGATGCGGCAGCATTTCCTCTCGATTTCC
GACGACTGGAAACCCTACCTTTTTATGAGCTGA

Upstream 100 bases:

>100_bases
TTTTTCCCCGAGTCAGCCCAAAAGCGCTGACTGAGCAGTTCCGAAACTGATAGCCACAACCGCGATGCGCGGTGCAAAGA
TCAGGTGGAGATGAGCAATC

Downstream 100 bases:

>100_bases
CCGGCCGGTTCGTGTCTTCCGGCTGCGGGGTCATTTCATCCGGATTTCCGAATAATCACCGATATTCAGCTCGTGTCCCA
TGGCCGTGACGATGGCGTGA

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Restriction Endonuclease; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLLHKAKVLVLNASYEPLSICDARNAVLLLFGGKAMVVASHPEHRIRTVSESFPLPSIVRLTVYVRVEYRHAVLSRKNIF
RRDGYRCQYCGRNDLQLTLDHVIPKSRGGEDRWDNLITACKPCNTLKGNRTPTEAGMTMLQKPFRPSHIALMRQHFLSIS
DDWKPYLFMS

Sequences:

>Translated_170_residues
MLLHKAKVLVLNASYEPLSICDARNAVLLLFGGKAMVVASHPEHRIRTVSESFPLPSIVRLTVYVRVEYRHAVLSRKNIF
RRDGYRCQYCGRNDLQLTLDHVIPKSRGGEDRWDNLITACKPCNTLKGNRTPTEAGMTMLQKPFRPSHIALMRQHFLSIS
DDWKPYLFMS
>Mature_170_residues
MLLHKAKVLVLNASYEPLSICDARNAVLLLFGGKAMVVASHPEHRIRTVSESFPLPSIVRLTVYVRVEYRHAVLSRKNIF
RRDGYRCQYCGRNDLQLTLDHVIPKSRGGEDRWDNLITACKPCNTLKGNRTPTEAGMTMLQKPFRPSHIALMRQHFLSIS
DDWKPYLFMS

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19525; Mature: 19525

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHKAKVLVLNASYEPLSICDARNAVLLLFGGKAMVVASHPEHRIRTVSESFPLPSIVR
CCEECEEEEEEECCCCCEEEECCCCEEEEEECCCEEEEECCCCHHHHHHHHCCCCCCEEE
LTVYVRVEYRHAVLSRKNIFRRDGYRCQYCGRNDLQLTLDHVIPKSRGGEDRWDNLITAC
EEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHCCCCCCCCHHHHHHHHHC
KPCNTLKGNRTPTEAGMTMLQKPFRPSHIALMRQHFLSISDDWKPYLFMS
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MLLHKAKVLVLNASYEPLSICDARNAVLLLFGGKAMVVASHPEHRIRTVSESFPLPSIVR
CCEECEEEEEEECCCCCEEEECCCCEEEEEECCCEEEEECCCCHHHHHHHHCCCCCCEEE
LTVYVRVEYRHAVLSRKNIFRRDGYRCQYCGRNDLQLTLDHVIPKSRGGEDRWDNLITAC
EEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHCCCCCCCCHHHHHHHHHC
KPCNTLKGNRTPTEAGMTMLQKPFRPSHIALMRQHFLSISDDWKPYLFMS
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA