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The map label for this gene is crtI [H]

Identifier: 193212317

GI number: 193212317

Start: 694193

End: 695704

Strand: Direct

Name: crtI [H]

Synonym: Cpar_0650

Alternate gene names: 193212317

Gene position: 694193-695704 (Clockwise)

Preceding gene: 193212310

Following gene: 193212322

Centisome position: 30.32

GC content: 57.21

Gene sequence:

>1512_bases
ATGTCGGAAACGTTAGATGTTATTGTCATCGGAGCGGGAATCGGCGGCTTGACGTCTGCCGCATTGCTTCAGGAACGGGG
GTTCAAGACGATTGTGTTCGAGAAGAACGCGTTTCCCGGCGGGAGCTGCTCGGCGTTCAGAAAAGGGGGATATACCTTTG
ACGCTGGAGCTTCCGTTTTTTACGGGTTTAATGAGGATGATTCGGTGGGAACGCTGAACCTTCACGCACGCATTTTTCGC
AAGCTGGGTGTTTCGCTTGAAACGGTTCCCGATCCGGTGCAGATTCACTATCACATGCCGGCGGGTTTCGAAGTTCCCGC
ATGGTATGACCGACGCCGTTTTCTCGACGTGCTGATCCGGCGCTTTCCGCACGAAAAGGAGGGAATTGTCAAATTTTACG
ATGCGCTTGAGTCGGTGTACGATATTCTGAGTTCACTTCCGGCGGGATCGCTGGAGGATGTGATGCACCTTGCTGGTGTC
GGAGCGAAGCATCCTCTTAAAACGATGGCGCTTGGAGTCAAAACTTTATACTCGATGGGGGGAACGGCGCGTCGTTTTAT
CAGTGATCCCGAACTGCTTCGCTTCATCGATCTCGAATCCTACTCCTGGGCGGTGCAGGACGCCTCTTCAACACCGCTGG
TCAATGCGGGCATCTGCCTGGCCGACCGCCATCACGGTGGCATCAACTATCCCATCGGCGGTTCGGGAGCCATTCCCGAT
GCGCTGGTCAAAGGCTATGAAAAGTACGGTGGTTCGGTGAGGTATCGCTCCGAGGTCAAGAGCGTGATTGTCGAGAACGG
CGCGGCTGTCGGCGTGCGGCTGGCGGATGGCAGCGAGGTGCGGGCGCGAGCGGTCGTCAGCAACGCAACGGTGTGGGATA
CCTTCAATCGTCTGGTGGATGATTCCAGGCTCCGGGTGCCGGAAGATCGCTTCATCAAGGCTCCGAGCTGGTTTCAGATC
TGGTTGGGCGTCGATGGTTCCATTGTTCCGAATGACTTCCACATGCACCACATCATTGTGGACGACTGGGCGAAGTACGA
CAAGCTCGGCGGCACGATCTACTTTTCGGCTCCGTCGGTGCTCGATCCGTCGCTTGCTCCTGAGGGCAAACATGCGCTGC
ATCTGTTCGTTACCGCCGAGACCTCGCAGTGGGAGCAGTACGAGCGTCAGAGCCCGGAGTATCGGAATGCCAAAGAGGAG
TTTGCTCGCTCGGTCATCGCTCGCGCCGAGAGCATTCTGCCCGGATTGCAGAAGGGCGTGGAGCTGATGGTGACTGCCAC
GCCGCAGACCCACGTCCGGTATCTCAATCGTCGTGACGGTTCGTACGGCCCGCTGCTCAAGCCGGGTCAGAACGTGCTGC
TCAAGCCACAGAATCGTACGCCGGTGAAGAATCTTTTCTCCGCCGGCGACAGCACTTTTCCCGGACAGGGAGTTATCGCC
GTGACCTATTCGGGCGTTTCGTGTGCCTCCTACATCGCACGGCAATTTGGCAAGCCGCTTGACTATTTGTGA

Upstream 100 bases:

>100_bases
AGTACAAATAATATAAAAATATATCTTTAGAGAATTTAGCTACAAGCAGCAAAAGTTGTACAGGTCTTATGCGACGCTTT
TGCATAATCAAATCAGAGGT

Downstream 100 bases:

>100_bases
GAATCATTGACAGTGATTACTCCGAGGCGGAGGCGAGCAACATGTCGATTTCTCGGAAGGGAAAACCGGTCAGTTCAGCG
AGGACTTTTTTTGTGACGTA

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MSETLDVIVIGAGIGGLTSAALLQERGFKTIVFEKNAFPGGSCSAFRKGGYTFDAGASVFYGFNEDDSVGTLNLHARIFR
KLGVSLETVPDPVQIHYHMPAGFEVPAWYDRRRFLDVLIRRFPHEKEGIVKFYDALESVYDILSSLPAGSLEDVMHLAGV
GAKHPLKTMALGVKTLYSMGGTARRFISDPELLRFIDLESYSWAVQDASSTPLVNAGICLADRHHGGINYPIGGSGAIPD
ALVKGYEKYGGSVRYRSEVKSVIVENGAAVGVRLADGSEVRARAVVSNATVWDTFNRLVDDSRLRVPEDRFIKAPSWFQI
WLGVDGSIVPNDFHMHHIIVDDWAKYDKLGGTIYFSAPSVLDPSLAPEGKHALHLFVTAETSQWEQYERQSPEYRNAKEE
FARSVIARAESILPGLQKGVELMVTATPQTHVRYLNRRDGSYGPLLKPGQNVLLKPQNRTPVKNLFSAGDSTFPGQGVIA
VTYSGVSCASYIARQFGKPLDYL

Sequences:

>Translated_503_residues
MSETLDVIVIGAGIGGLTSAALLQERGFKTIVFEKNAFPGGSCSAFRKGGYTFDAGASVFYGFNEDDSVGTLNLHARIFR
KLGVSLETVPDPVQIHYHMPAGFEVPAWYDRRRFLDVLIRRFPHEKEGIVKFYDALESVYDILSSLPAGSLEDVMHLAGV
GAKHPLKTMALGVKTLYSMGGTARRFISDPELLRFIDLESYSWAVQDASSTPLVNAGICLADRHHGGINYPIGGSGAIPD
ALVKGYEKYGGSVRYRSEVKSVIVENGAAVGVRLADGSEVRARAVVSNATVWDTFNRLVDDSRLRVPEDRFIKAPSWFQI
WLGVDGSIVPNDFHMHHIIVDDWAKYDKLGGTIYFSAPSVLDPSLAPEGKHALHLFVTAETSQWEQYERQSPEYRNAKEE
FARSVIARAESILPGLQKGVELMVTATPQTHVRYLNRRDGSYGPLLKPGQNVLLKPQNRTPVKNLFSAGDSTFPGQGVIA
VTYSGVSCASYIARQFGKPLDYL
>Mature_502_residues
SETLDVIVIGAGIGGLTSAALLQERGFKTIVFEKNAFPGGSCSAFRKGGYTFDAGASVFYGFNEDDSVGTLNLHARIFRK
LGVSLETVPDPVQIHYHMPAGFEVPAWYDRRRFLDVLIRRFPHEKEGIVKFYDALESVYDILSSLPAGSLEDVMHLAGVG
AKHPLKTMALGVKTLYSMGGTARRFISDPELLRFIDLESYSWAVQDASSTPLVNAGICLADRHHGGINYPIGGSGAIPDA
LVKGYEKYGGSVRYRSEVKSVIVENGAAVGVRLADGSEVRARAVVSNATVWDTFNRLVDDSRLRVPEDRFIKAPSWFQIW
LGVDGSIVPNDFHMHHIIVDDWAKYDKLGGTIYFSAPSVLDPSLAPEGKHALHLFVTAETSQWEQYERQSPEYRNAKEEF
ARSVIARAESILPGLQKGVELMVTATPQTHVRYLNRRDGSYGPLLKPGQNVLLKPQNRTPVKNLFSAGDSTFPGQGVIAV
TYSGVSCASYIARQFGKPLDYL

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI203098013, Length=544, Percent_Identity=23.5294117647059, Blast_Score=85, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55267; Mature: 55136

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETLDVIVIGAGIGGLTSAALLQERGFKTIVFEKNAFPGGSCSAFRKGGYTFDAGASVF
CCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCEEEECCCEEE
YGFNEDDSVGTLNLHARIFRKLGVSLETVPDPVQIHYHMPAGFEVPAWYDRRRFLDVLIR
ECCCCCCCEEEEHHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
RFPHEKEGIVKFYDALESVYDILSSLPAGSLEDVMHLAGVGAKHPLKTMALGVKTLYSMG
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
GTARRFISDPELLRFIDLESYSWAVQDASSTPLVNAGICLADRHHGGINYPIGGSGAIPD
CHHHHHCCCCHHEEEEECCCCEEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCCHH
ALVKGYEKYGGSVRYRSEVKSVIVENGAAVGVRLADGSEVRARAVVSNATVWDTFNRLVD
HHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHC
DSRLRVPEDRFIKAPSWFQIWLGVDGSIVPNDFHMHHIIVDDWAKYDKLGGTIYFSAPSV
CCCCCCCHHHEECCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHCCCEEEECCCCC
LDPSLAPEGKHALHLFVTAETSQWEQYERQSPEYRNAKEEFARSVIARAESILPGLQKGV
CCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
ELMVTATPQTHVRYLNRRDGSYGPLLKPGQNVLLKPQNRTPVKNLFSAGDSTFPGQGVIA
EEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCEEE
VTYSGVSCASYIARQFGKPLDYL
EEECCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SETLDVIVIGAGIGGLTSAALLQERGFKTIVFEKNAFPGGSCSAFRKGGYTFDAGASVF
CCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCEEEECCCEEE
YGFNEDDSVGTLNLHARIFRKLGVSLETVPDPVQIHYHMPAGFEVPAWYDRRRFLDVLIR
ECCCCCCCEEEEHHHHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
RFPHEKEGIVKFYDALESVYDILSSLPAGSLEDVMHLAGVGAKHPLKTMALGVKTLYSMG
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
GTARRFISDPELLRFIDLESYSWAVQDASSTPLVNAGICLADRHHGGINYPIGGSGAIPD
CHHHHHCCCCHHEEEEECCCCEEEEECCCCCCEEECCEEEEECCCCCCCCCCCCCCCCHH
ALVKGYEKYGGSVRYRSEVKSVIVENGAAVGVRLADGSEVRARAVVSNATVWDTFNRLVD
HHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHC
DSRLRVPEDRFIKAPSWFQIWLGVDGSIVPNDFHMHHIIVDDWAKYDKLGGTIYFSAPSV
CCCCCCCHHHEECCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHCCCEEEECCCCC
LDPSLAPEGKHALHLFVTAETSQWEQYERQSPEYRNAKEEFARSVIARAESILPGLQKGV
CCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
ELMVTATPQTHVRYLNRRDGSYGPLLKPGQNVLLKPQNRTPVKNLFSAGDSTFPGQGVIA
EEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCEEE
VTYSGVSCASYIARQFGKPLDYL
EEECCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]