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The map label for this gene is 193212228

Identifier: 193212228

GI number: 193212228

Start: 600472

End: 602157

Strand: Direct

Name: 193212228

Synonym: Cpar_0559

Alternate gene names: NA

Gene position: 600472-602157 (Clockwise)

Preceding gene: 193212227

Following gene: 193212230

Centisome position: 26.23

GC content: 54.39

Gene sequence:

>1686_bases
ATGTCGGCCTTGACTGCCTTGTCGCTGCTCTCCGCTCCTGCAGGCATGAATGCTGCACAGGCGGCGATCGATCGTGCACC
CTTGTCACAGAAGGTCATGCCGGATTATGTGCAGGCTCTGCTGCTCAACATGAAGGGGGACTACTGGGGCGCTATCGAGG
GGCTGAGAAAGGTCATGGCTGTTCTGCCCGATGAACCGGCCGTTCGATTTTCGATCTCCCAATCCTACCGTCACTTGGCC
GTTCTCGATTCAGCCAGGGTTTACGGCGAAGCTGCCGTGAAGCTGGCGCCGTCTAACCCGCACTATCATCTCTATCTTGC
CGATCTTGCGCAGGATATGCATGATTACAATCGCTCGGCCGAGCTGTACGGGCAGGCGTTCGATCTCCAGCCGGACAAAC
CGGAGCTTCTTTACCTGCAGGGGCTCGAACTCATGTCGGCCAATCAGCCAGAGCCGGCGATCAGGGTGTTTGAAAAAGCG
GTAAGCCTCGATCCGTATAACGACAATGCGCTGTCGCAGATTTTACAGCTTCAGATCAGGCTTAAGCGTTTTCCGGAGGC
TATCGAAACCTGCAACAAGATGCTGGAAATCGATGGCAGCAACCTGAAACTCAGGCTGATACTTGCGGAGCTGTATGCAA
AAAATAACCAGGCGGCGCGTGCTGTTGCCACGCTGAAAGAGGTTATCCAGACCGATCCCGGCTATGTTCCCGGATGGAGT
GCGTTGTTCGACTTTTACATCAGTGCCGGACGCTCTGCTGATTTCCGCCGTGAGCTTCGCGCTTTTCTCGATTCCAAGGC
AGCCTCTTCAGAAAAGATCGACGACCTTGCCCGTCTTTTCATTGTCCGTTCCGGAAAGCAGGAGCAGTATGAAGCCCCTA
CCCGCGAGTTTCTTGACGAGCTCATTGCAGTCCGTCCTCGGGAGAGCAAACTGTTTGTGCTGAAGGGATTGTTCGAAATG
ATCCATGATCGGCAACGCGCCGGGCAGCTCTGTTTCAGCAAGGCGGTTGAGCTCAATTCCTCCAATGCCGAGGCCTGGGA
GGCTCTGATTTCCGCGCATATTTCGATGAATGAAAAGACACAGGCCTATGCTCTTCTCCGGAAAGCCAATGCGGCGCTCC
CTGGAGAAGGCTTGCGCTGGAAGCTGCTCGAAGGCTCTCTTTTGCTGCAAGCGGGAGAACCAAAAAAGGCTGCAACGGTG
CTTCAACAGGCCGTCCGCATGAAGATGACGGATGATGATCTACCGTTGTTGATTCGAGCACACATCAGCCTTGCGTTGGC
CTATGACGGACTTGGCATGAAAAATCGTTCGAGGCAGGCTTACACCACAGTGCTGAGACTCGATGCCCACAACTCCCTTG
CGATGAACAACCTCGCATACCTGCTTGCCGAAGAGGGAATCAAGCTTCGGGACGCGCTGTTACTGGCTACCAATGCCGTG
CTTCTCGAGCCGGACAACGGGGTTTATCTCGATACGCTCGGCTGGGTGAACTACAAGCTTGGCGAGTATGATCGGGCCCG
GATTCTGCTTGAAAAGGCGATTGAGACGGGTATTGAGGAGCCCGAAGTTTATCTCCATCTTGGTGAGGCGTACCGGAAGC
TTGGCGATGAGCCGAAAGCGAAGGAGATGTTTGAGAAAGCAAAAGCAGCTTCTCGAAAAGCAGGAAAAGAAAAAAGCGGT
CATTGA

Upstream 100 bases:

>100_bases
TTTCCTACCCTGGCATGCAGGATCATGGGCCGCTCTTCGACCACAATTCATGACGCCTGAAGCGAACAACAGTAAGCCTC
GTGCTGGTCGTCGGCTCTTC

Downstream 100 bases:

>100_bases
CCGCTTTTTTCTTTGTTCGGAACCGGTGTTCGGTTCAGCTTATGCCTCACCTTCAATCGAACGGGTGGCGAGGTGTTCGT
AGTGGGCCCAGCGATGATCG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; TPR Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family; PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide Repeat Family Protein; TPR-Repeat-Containing Protein; Intermediate Filament Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Domain Protein; TPR Repeat Domain-Containing Protein; Tpr Domain Protein

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MSALTALSLLSAPAGMNAAQAAIDRAPLSQKVMPDYVQALLLNMKGDYWGAIEGLRKVMAVLPDEPAVRFSISQSYRHLA
VLDSARVYGEAAVKLAPSNPHYHLYLADLAQDMHDYNRSAELYGQAFDLQPDKPELLYLQGLELMSANQPEPAIRVFEKA
VSLDPYNDNALSQILQLQIRLKRFPEAIETCNKMLEIDGSNLKLRLILAELYAKNNQAARAVATLKEVIQTDPGYVPGWS
ALFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQEQYEAPTREFLDELIAVRPRESKLFVLKGLFEM
IHDRQRAGQLCFSKAVELNSSNAEAWEALISAHISMNEKTQAYALLRKANAALPGEGLRWKLLEGSLLLQAGEPKKAATV
LQQAVRMKMTDDDLPLLIRAHISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLRDALLLATNAV
LLEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEAYRKLGDEPKAKEMFEKAKAASRKAGKEKSG
H

Sequences:

>Translated_561_residues
MSALTALSLLSAPAGMNAAQAAIDRAPLSQKVMPDYVQALLLNMKGDYWGAIEGLRKVMAVLPDEPAVRFSISQSYRHLA
VLDSARVYGEAAVKLAPSNPHYHLYLADLAQDMHDYNRSAELYGQAFDLQPDKPELLYLQGLELMSANQPEPAIRVFEKA
VSLDPYNDNALSQILQLQIRLKRFPEAIETCNKMLEIDGSNLKLRLILAELYAKNNQAARAVATLKEVIQTDPGYVPGWS
ALFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQEQYEAPTREFLDELIAVRPRESKLFVLKGLFEM
IHDRQRAGQLCFSKAVELNSSNAEAWEALISAHISMNEKTQAYALLRKANAALPGEGLRWKLLEGSLLLQAGEPKKAATV
LQQAVRMKMTDDDLPLLIRAHISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLRDALLLATNAV
LLEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEAYRKLGDEPKAKEMFEKAKAASRKAGKEKSG
H
>Mature_560_residues
SALTALSLLSAPAGMNAAQAAIDRAPLSQKVMPDYVQALLLNMKGDYWGAIEGLRKVMAVLPDEPAVRFSISQSYRHLAV
LDSARVYGEAAVKLAPSNPHYHLYLADLAQDMHDYNRSAELYGQAFDLQPDKPELLYLQGLELMSANQPEPAIRVFEKAV
SLDPYNDNALSQILQLQIRLKRFPEAIETCNKMLEIDGSNLKLRLILAELYAKNNQAARAVATLKEVIQTDPGYVPGWSA
LFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQEQYEAPTREFLDELIAVRPRESKLFVLKGLFEMI
HDRQRAGQLCFSKAVELNSSNAEAWEALISAHISMNEKTQAYALLRKANAALPGEGLRWKLLEGSLLLQAGEPKKAATVL
QQAVRMKMTDDDLPLLIRAHISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLRDALLLATNAVL
LEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEAYRKLGDEPKAKEMFEKAKAASRKAGKEKSGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62519; Mature: 62387

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTALSLLSAPAGMNAAQAAIDRAPLSQKVMPDYVQALLLNMKGDYWGAIEGLRKVMA
CCHHHHHHHHHCCCCCCHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLPDEPAVRFSISQSYRHLAVLDSARVYGEAAVKLAPSNPHYHLYLADLAQDMHDYNRSA
HCCCCCCEEEEHHHCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHHHHCCCH
ELYGQAFDLQPDKPELLYLQGLELMSANQPEPAIRVFEKAVSLDPYNDNALSQILQLQIR
HHCCCEECCCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LKRFPEAIETCNKMLEIDGSNLKLRLILAELYAKNNQAARAVATLKEVIQTDPGYVPGWS
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHH
ALFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQEQYEAPTREFLDE
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHH
LIAVRPRESKLFVLKGLFEMIHDRQRAGQLCFSKAVELNSSNAEAWEALISAHISMNEKT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
QAYALLRKANAALPGEGLRWKLLEGSLLLQAGEPKKAATVLQQAVRMKMTDDDLPLLIRA
HHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
HISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLRDALLLATNAV
HHHHEEEECCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHEEECEE
LLEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEAYRKLGDEPKA
EEECCCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHH
KEMFEKAKAASRKAGKEKSGH
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SALTALSLLSAPAGMNAAQAAIDRAPLSQKVMPDYVQALLLNMKGDYWGAIEGLRKVMA
CHHHHHHHHHCCCCCCHHHHHHHHCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLPDEPAVRFSISQSYRHLAVLDSARVYGEAAVKLAPSNPHYHLYLADLAQDMHDYNRSA
HCCCCCCEEEEHHHCHHHHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHHHHCCCH
ELYGQAFDLQPDKPELLYLQGLELMSANQPEPAIRVFEKAVSLDPYNDNALSQILQLQIR
HHCCCEECCCCCCCCEEEEECCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LKRFPEAIETCNKMLEIDGSNLKLRLILAELYAKNNQAARAVATLKEVIQTDPGYVPGWS
HHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHH
ALFDFYISAGRSADFRRELRAFLDSKAASSEKIDDLARLFIVRSGKQEQYEAPTREFLDE
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHH
LIAVRPRESKLFVLKGLFEMIHDRQRAGQLCFSKAVELNSSNAEAWEALISAHISMNEKT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
QAYALLRKANAALPGEGLRWKLLEGSLLLQAGEPKKAATVLQQAVRMKMTDDDLPLLIRA
HHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
HISLALAYDGLGMKNRSRQAYTTVLRLDAHNSLAMNNLAYLLAEEGIKLRDALLLATNAV
HHHHEEEECCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHEEECEE
LLEPDNGVYLDTLGWVNYKLGEYDRARILLEKAIETGIEEPEVYLHLGEAYRKLGDEPKA
EEECCCCEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHH
KEMFEKAKAASRKAGKEKSGH
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA