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The map label for this gene is 193212165

Identifier: 193212165

GI number: 193212165

Start: 529475

End: 531283

Strand: Direct

Name: 193212165

Synonym: Cpar_0496

Alternate gene names: NA

Gene position: 529475-531283 (Clockwise)

Preceding gene: 193212162

Following gene: 193212166

Centisome position: 23.13

GC content: 59.98

Gene sequence:

>1809_bases
ATGGCGTACTACAAACACATCTGCTTTGTCGAAGCTCCGCAGGCGATTGTTACGCCGTTTCCGAGGTATATCAGCGACTG
CATCGGCGTCTGCTATCTGGCGGCTGCTGTCGAGGACATCGTCGAGAGCATGGCGATGCCGGAGAACTATTACAACGACG
GGATTTTCGAGAGCTTCGAGACGTTGTTGAAATCGCGGCGTTTCGATCTCGTCGCCATCTCGTCGATGACTGGCGGGTTC
AACAATGCAGAGAAGCTGGCGCGGATTGCGAAAAAGCATGGCGTGACGGTGGTGATGGGCGGGTTCCATCCGACCGCTCT
GCCCGAAAAGGTGCTCGATCTCGGCTGCGTCGATCTGGTGGTGGTCGGCGAAGGGGAGGCGACCTTCCGCGAGCTGGTCG
AAAAAGGCCCCTCGCGTGACGTGAAAGGACTCTGCTGGAAGGAGAACGGCGCGTTCGTCCATACCGGCATCCGCGAGCTT
ATCAAGGATGTGGATTCGATCCGGTTTCCGCTCCGTTCGCTCCGCCCGAAGCGGTTCGGGGAGAAGAGCAGCGACTACAC
GATCGACACGATTTATACGTCGCGCGGCTGTCCGTGGGTTTGCTCCTTCTGCGCGAACGACAAGATGCACAAGCACTGGC
GCGGACGGAGTGCTGAGAACGTGGTCGAGGAGATCGCGCAGTTGCACGACCGCAAAAAGAAGAAGCTGCTGAAAATCTGG
GATGCGAACTTCCTGACCAACATCAGGCGCGTCGAGCGGATTTGCGATCTGATGATCGAGCGCGGGTTGACCAACTTCCG
GATCGTCACCGAGACGCGGGCCAAGGATGTGATCCGCGCCGAGCGCATTCTGCCGAAGCTGCGCAAAATCGGCCTGAGCA
AGGTGGGTCTCGGCATCGAGAGTCCGAACCCGAAGACGCTCGCCCTGATGAACAAGGAGAACTCGCTCGACGAGGTGACG
ACCGCGATCAAGCTGCTGAACCAGTATGGCGTCGGCTCGGAGGGGTACTTCATCGTTGGCCACTATTCGGAGAGCGTCGA
GGATACGATGCCCTATCCGAAGTTCGCCCGAGCGCTCGGCCTGCGCCAGACGCTCTTCATGGCGATGACCCCCTATCCCG
GCACCAGGATTTTCGACGAGTACGCCCGCGACAACAACATCACCTCCTTCGACTGGGATCTGTACAACAACTTCGTGCCG
GTGATCCGCACGGCGCACATGGAGAACCGCGACATCATGCGCATGATGGTCTACTGCAACGTGGCCTTCTGCGACTACCG
CTCCGTGCTCAAGCGCGACGACAATCGCGGCGTGCTGCTCACGTTCCTGAAGGATTTGTTCCAGCTCGTGTTCCTGCTGA
AGGTCAACAAAACGCTCGACCGCAAGGAGGCTTCGCAGATCGTCTTCGAGGCGTTCGAGCTGTGGCTCGGCACCAATCCG
AAGCTCGACTACACCAAAACGCCGCCCCCGTTGCCTCTCAAAGAGCCGACCGGCGTGTGCCTCGCGCACGCGGCATCGGG
CAACCGGATCGACTTCGTCGTCGAGCAGGCGGGCGACCGTCGGGTGCTCAAGCTGCGTGAGGTAGCGTCGAGCGAGCCGA
CAAAGTTTCCTGTCGTAAGTCTCGACGAGGTGGTCGATGCGGCCTTTTCGCTCTCGATGGACGCGCTCATGCGTCTGCTC
TATCGCAATGAACTGATGCGCAACAACCCGCGCCTCACATCCCGCCAGGTGCTCGCGCTCTTCGCCGACCGCGACATCCG
CAAAGTCGCGATGCGTTTCTGGCGGTTGTACCGAGGCTGTATGCGGTGA

Upstream 100 bases:

>100_bases
TTCTAGCGGAGTGTAGGCCTAATCTTCGGGGTTAGCTTATCGCATCGTTATCCTTCCATATTTCCTTGATCTGAACCCAA
TCCGGAACTAATCCCACCGT

Downstream 100 bases:

>100_bases
TAAAGGTTTGGACGACGATGTTGTTCTAAAGCCTTTGTAGGGGCAGACACATAGGTCTGCCCCTACAAGAAATTCATAAT
GACGAGGTTCGATCCCGATT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MAYYKHICFVEAPQAIVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFETLLKSRRFDLVAISSMTGGF
NNAEKLARIAKKHGVTVVMGGFHPTALPEKVLDLGCVDLVVVGEGEATFRELVEKGPSRDVKGLCWKENGAFVHTGIREL
IKDVDSIRFPLRSLRPKRFGEKSSDYTIDTIYTSRGCPWVCSFCANDKMHKHWRGRSAENVVEEIAQLHDRKKKKLLKIW
DANFLTNIRRVERICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIESPNPKTLALMNKENSLDEVT
TAIKLLNQYGVGSEGYFIVGHYSESVEDTMPYPKFARALGLRQTLFMAMTPYPGTRIFDEYARDNNITSFDWDLYNNFVP
VIRTAHMENRDIMRMMVYCNVAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP
KLDYTKTPPPLPLKEPTGVCLAHAASGNRIDFVVEQAGDRRVLKLREVASSEPTKFPVVSLDEVVDAAFSLSMDALMRLL
YRNELMRNNPRLTSRQVLALFADRDIRKVAMRFWRLYRGCMR

Sequences:

>Translated_602_residues
MAYYKHICFVEAPQAIVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFETLLKSRRFDLVAISSMTGGF
NNAEKLARIAKKHGVTVVMGGFHPTALPEKVLDLGCVDLVVVGEGEATFRELVEKGPSRDVKGLCWKENGAFVHTGIREL
IKDVDSIRFPLRSLRPKRFGEKSSDYTIDTIYTSRGCPWVCSFCANDKMHKHWRGRSAENVVEEIAQLHDRKKKKLLKIW
DANFLTNIRRVERICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIESPNPKTLALMNKENSLDEVT
TAIKLLNQYGVGSEGYFIVGHYSESVEDTMPYPKFARALGLRQTLFMAMTPYPGTRIFDEYARDNNITSFDWDLYNNFVP
VIRTAHMENRDIMRMMVYCNVAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP
KLDYTKTPPPLPLKEPTGVCLAHAASGNRIDFVVEQAGDRRVLKLREVASSEPTKFPVVSLDEVVDAAFSLSMDALMRLL
YRNELMRNNPRLTSRQVLALFADRDIRKVAMRFWRLYRGCMR
>Mature_601_residues
AYYKHICFVEAPQAIVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFETLLKSRRFDLVAISSMTGGFN
NAEKLARIAKKHGVTVVMGGFHPTALPEKVLDLGCVDLVVVGEGEATFRELVEKGPSRDVKGLCWKENGAFVHTGIRELI
KDVDSIRFPLRSLRPKRFGEKSSDYTIDTIYTSRGCPWVCSFCANDKMHKHWRGRSAENVVEEIAQLHDRKKKKLLKIWD
ANFLTNIRRVERICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIESPNPKTLALMNKENSLDEVTT
AIKLLNQYGVGSEGYFIVGHYSESVEDTMPYPKFARALGLRQTLFMAMTPYPGTRIFDEYARDNNITSFDWDLYNNFVPV
IRTAHMENRDIMRMMVYCNVAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNPK
LDYTKTPPPLPLKEPTGVCLAHAASGNRIDFVVEQAGDRRVLKLREVASSEPTKFPVVSLDEVVDAAFSLSMDALMRLLY
RNELMRNNPRLTSRQVLALFADRDIRKVAMRFWRLYRGCMR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 68883; Mature: 68752

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYKHICFVEAPQAIVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFE
CCCHHCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHH
TLLKSRRFDLVAISSMTGGFNNAEKLARIAKKHGVTVVMGGFHPTALPEKVLDLGCVDLV
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCEEEE
VVGEGEATFRELVEKGPSRDVKGLCWKENGAFVHTGIRELIKDVDSIRFPLRSLRPKRFG
EECCCHHHHHHHHHCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHCC
EKSSDYTIDTIYTSRGCPWVCSFCANDKMHKHWRGRSAENVVEEIAQLHDRKKKKLLKIW
CCCCCEEEEEEEECCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DANFLTNIRRVERICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
SPNPKTLALMNKENSLDEVTTAIKLLNQYGVGSEGYFIVGHYSESVEDTMPYPKFARALG
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCHHHHHHHH
LRQTLFMAMTPYPGTRIFDEYARDNNITSFDWDLYNNFVPVIRTAHMENRDIMRMMVYCN
HHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHCCCCHHHHHHHHHHH
VAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLDYTKTPPPLPLKEPTGVCLAHAASGNRIDFVVEQAGDRRVLKLREVASSEPTKFPVVS
CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEE
LDEVVDAAFSLSMDALMRLLYRNELMRNNPRLTSRQVLALFADRDIRKVAMRFWRLYRGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MR
CC
>Mature Secondary Structure 
AYYKHICFVEAPQAIVTPFPRYISDCIGVCYLAAAVEDIVESMAMPENYYNDGIFESFE
CCHHCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHH
TLLKSRRFDLVAISSMTGGFNNAEKLARIAKKHGVTVVMGGFHPTALPEKVLDLGCVDLV
HHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCEEEE
VVGEGEATFRELVEKGPSRDVKGLCWKENGAFVHTGIRELIKDVDSIRFPLRSLRPKRFG
EECCCHHHHHHHHHCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHCC
EKSSDYTIDTIYTSRGCPWVCSFCANDKMHKHWRGRSAENVVEEIAQLHDRKKKKLLKIW
CCCCCEEEEEEEECCCCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DANFLTNIRRVERICDLMIERGLTNFRIVTETRAKDVIRAERILPKLRKIGLSKVGLGIE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
SPNPKTLALMNKENSLDEVTTAIKLLNQYGVGSEGYFIVGHYSESVEDTMPYPKFARALG
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCHHHHHHHH
LRQTLFMAMTPYPGTRIFDEYARDNNITSFDWDLYNNFVPVIRTAHMENRDIMRMMVYCN
HHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHCCCCHHHHHHHHHHH
VAFCDYRSVLKRDDNRGVLLTFLKDLFQLVFLLKVNKTLDRKEASQIVFEAFELWLGTNP
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLDYTKTPPPLPLKEPTGVCLAHAASGNRIDFVVEQAGDRRVLKLREVASSEPTKFPVVS
CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEE
LDEVVDAAFSLSMDALMRLLYRNELMRNNPRLTSRQVLALFADRDIRKVAMRFWRLYRGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]