| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212125
Identifier: 193212125
GI number: 193212125
Start: 487792
End: 488352
Strand: Direct
Name: 193212125
Synonym: Cpar_0456
Alternate gene names: NA
Gene position: 487792-488352 (Clockwise)
Preceding gene: 193212124
Following gene: 193212128
Centisome position: 21.31
GC content: 54.37
Gene sequence:
>561_bases ATGGCCGGTTCGGCGCGGATTATTTTGCCGCATGGCAACTACAAGAAGCTGCACTCCTACCGGAAAAGCGCGATTATTTA CGACTTGACGGTTCGGTTCTGCCAGAGGTTTCTTTCGCGCCGCGACCGCACGGTTGACCAGATGGTTCAGGCTGCACGCT CTGGCAAGCAGAATATTGTCGAGGGTTGCATGGCTTCCGGAACCTCGAAAGAGATGGAGATCAAGCTGGTCAATGTAGCC AGAGCGAGCCTCGAAGAGTTGCTGGAGGATTATTTCGATTTCCTGCGAACTCGCAATCTACCGGTTTGGGGGAAAAATTC ACGAGAGGCGCTGTTCGTCAGAAAGCTCTCACGCGAGAGCGGCGTGAGTTACGAATCGTTTCGCGAGTTTGTTGAAACCC GTCCCGCCGAAGTGGTGGCCAACATCGCCATTTGCCTGATCCACCAGGCAAGTTTTCTACTCAAACGTCAGCTCGAAACA CTCGAACAACAATTCCTCGAAGCGGGCGGCATCCGCGAGCGAATGACCAAAGCCCGCCTCGAATACCGTCAGCGCAGGTA A
Upstream 100 bases:
>100_bases TGGGACGAGTGGGACTTTTGGGACAGGGGGGAGGATGGCGAGGTTGTGGCGGGTTTTGTATATTGCGAGCAATACCCCAC AATTTCCAGATTGACAACGT
Downstream 100 bases:
>100_bases AAGTTTCACTGTCCTATCAGTTCTACTCATCCCAAAAGTCCTATTTCCCCTACTTCGTCGCCACGTACAGAATTGAAGTT TCAAACGTCATCGGGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MAGSARIILPHGNYKKLHSYRKSAIIYDLTVRFCQRFLSRRDRTVDQMVQAARSGKQNIVEGCMASGTSKEMEIKLVNVA RASLEELLEDYFDFLRTRNLPVWGKNSREALFVRKLSRESGVSYESFREFVETRPAEVVANIAICLIHQASFLLKRQLET LEQQFLEAGGIRERMTKARLEYRQRR
Sequences:
>Translated_186_residues MAGSARIILPHGNYKKLHSYRKSAIIYDLTVRFCQRFLSRRDRTVDQMVQAARSGKQNIVEGCMASGTSKEMEIKLVNVA RASLEELLEDYFDFLRTRNLPVWGKNSREALFVRKLSRESGVSYESFREFVETRPAEVVANIAICLIHQASFLLKRQLET LEQQFLEAGGIRERMTKARLEYRQRR >Mature_185_residues AGSARIILPHGNYKKLHSYRKSAIIYDLTVRFCQRFLSRRDRTVDQMVQAARSGKQNIVEGCMASGTSKEMEIKLVNVAR ASLEELLEDYFDFLRTRNLPVWGKNSREALFVRKLSRESGVSYESFREFVETRPAEVVANIAICLIHQASFLLKRQLETL EQQFLEAGGIRERMTKARLEYRQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21636; Mature: 21505
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSARIILPHGNYKKLHSYRKSAIIYDLTVRFCQRFLSRRDRTVDQMVQAARSGKQNIV CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH EGCMASGTSKEMEIKLVNVARASLEELLEDYFDFLRTRNLPVWGKNSREALFVRKLSRES HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GVSYESFREFVETRPAEVVANIAICLIHQASFLLKRQLETLEQQFLEAGGIRERMTKARL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EYRQRR HHHHCC >Mature Secondary Structure AGSARIILPHGNYKKLHSYRKSAIIYDLTVRFCQRFLSRRDRTVDQMVQAARSGKQNIV CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHH EGCMASGTSKEMEIKLVNVARASLEELLEDYFDFLRTRNLPVWGKNSREALFVRKLSRES HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC GVSYESFREFVETRPAEVVANIAICLIHQASFLLKRQLETLEQQFLEAGGIRERMTKARL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EYRQRR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA