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The map label for this gene is lsrF [H]

Identifier: 193212102

GI number: 193212102

Start: 467592

End: 468473

Strand: Direct

Name: lsrF [H]

Synonym: Cpar_0433

Alternate gene names: 193212102

Gene position: 467592-468473 (Clockwise)

Preceding gene: 193212101

Following gene: 193212103

Centisome position: 20.43

GC content: 58.73

Gene sequence:

>882_bases
ATGGCGGAGTACGATAAGGACAAACAGGCCAAAGAGTATTACACCGATATTCCGGTCGATACCCATGGCTTTTTTCTGAA
AGGCGCCCACTCGCTCGACTGGGGCATGAAGAATCGCCTTTCGAGGATTTTCCGCCCCGATACGGGCAAGACGGTCATGT
TCGCCATCGACCACGGTTACTTCCAGGGTCCGACCACCGGTCTGGAACGCCCTGACGTGAACATCGTGCCGCTCATGAAG
CACGCCGATGCTATCATGCTGACCCGTGGTATCCTTCGTACCACCGTTCCGCCGAGCCTCACCAAAGCGGTCGTGATGCG
GTGCAGCGGCGGGCCGAGCATTCTCAAGGAGCTGTCCGACGAGGAGCTGGCCGTTGACATCGAGGACGCCATCCGTATGA
ACGTTGCCTGCATCACGCTTCAGGTCTTCATCGGCGGCGAGTACGAGACCCGTTCGATTCACAACATGACCAAGCTGGTT
GACATGGGCCTCCGCTATGGCATTCCTACCATGGCCGTGACCGCTGTCGGCAAGGACATGGTGCGCGACGCCAAATACTT
CCGCCTGGCCACGCGCATCTGCGCTGAACTCGGCGCACAGCTCGTCAAAACCTACTACGTGCCGGAAGATTTCGAGACCG
TCGTGGCCTCCTGCCCGGTGCCGATCGTTATGGCTGGCGGCAAGAAGCTCCCCGAGCTCGACGCGCTGACCATGTCGTAC
AACGCGATCCAGGAGGGTGCTGCTGGCGTCGATATGGGCCGTAACATCTTCCAGAGCGACAACCCCGAGGAGATGATGCT
GGCTGTCAACAAGATCGTGCACGAAGGCTACAACCCTAACGAGGCTTACGAGTACTTCAACTCGCTCGTCGCCGGAAAGT
AA

Upstream 100 bases:

>100_bases
GCTCGATCACCACGGTCGATGGTGGCAACATCGCTGCCGCGCTCAGGTGAGCATCACAGTTTTACTATTCATTCAATAAC
CGAATCAGGAGGTCACGACG

Downstream 100 bases:

>100_bases
CTGTCGGGCGGCACTGACCGCCTTCACCGTCAAACGGGAGGCAGCGCGAACACTGCCTCCCGCGTTTTTATAACTGCAGC
GGCTGATCGAATCGAATTAT

Product: aldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAEYDKDKQAKEYYTDIPVDTHGFFLKGAHSLDWGMKNRLSRIFRPDTGKTVMFAIDHGYFQGPTTGLERPDVNIVPLMK
HADAIMLTRGILRTTVPPSLTKAVVMRCSGGPSILKELSDEELAVDIEDAIRMNVACITLQVFIGGEYETRSIHNMTKLV
DMGLRYGIPTMAVTAVGKDMVRDAKYFRLATRICAELGAQLVKTYYVPEDFETVVASCPVPIVMAGGKKLPELDALTMSY
NAIQEGAAGVDMGRNIFQSDNPEEMMLAVNKIVHEGYNPNEAYEYFNSLVAGK

Sequences:

>Translated_293_residues
MAEYDKDKQAKEYYTDIPVDTHGFFLKGAHSLDWGMKNRLSRIFRPDTGKTVMFAIDHGYFQGPTTGLERPDVNIVPLMK
HADAIMLTRGILRTTVPPSLTKAVVMRCSGGPSILKELSDEELAVDIEDAIRMNVACITLQVFIGGEYETRSIHNMTKLV
DMGLRYGIPTMAVTAVGKDMVRDAKYFRLATRICAELGAQLVKTYYVPEDFETVVASCPVPIVMAGGKKLPELDALTMSY
NAIQEGAAGVDMGRNIFQSDNPEEMMLAVNKIVHEGYNPNEAYEYFNSLVAGK
>Mature_292_residues
AEYDKDKQAKEYYTDIPVDTHGFFLKGAHSLDWGMKNRLSRIFRPDTGKTVMFAIDHGYFQGPTTGLERPDVNIVPLMKH
ADAIMLTRGILRTTVPPSLTKAVVMRCSGGPSILKELSDEELAVDIEDAIRMNVACITLQVFIGGEYETRSIHNMTKLVD
MGLRYGIPTMAVTAVGKDMVRDAKYFRLATRICAELGAQLVKTYYVPEDFETVVASCPVPIVMAGGKKLPELDALTMSYN
AIQEGAAGVDMGRNIFQSDNPEEMMLAVNKIVHEGYNPNEAYEYFNSLVAGK

Specific function: Could be involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle [H]

COG id: COG1830

COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1787796, Length=288, Percent_Identity=60.4166666666667, Blast_Score=370, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: 4.2.1.- [C]

Molecular weight: Translated: 32492; Mature: 32361

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYDKDKQAKEYYTDIPVDTHGFFLKGAHSLDWGMKNRLSRIFRPDTGKTVMFAIDHGY
CCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
FQGPTTGLERPDVNIVPLMKHADAIMLTRGILRTTVPPSLTKAVVMRCSGGPSILKELSD
CCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCC
EELAVDIEDAIRMNVACITLQVFIGGEYETRSIHNMTKLVDMGLRYGIPTMAVTAVGKDM
CCEEEEHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VRDAKYFRLATRICAELGAQLVKTYYVPEDFETVVASCPVPIVMAGGKKLPELDALTMSY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHH
NAIQEGAAGVDMGRNIFQSDNPEEMMLAVNKIVHEGYNPNEAYEYFNSLVAGK
HHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AEYDKDKQAKEYYTDIPVDTHGFFLKGAHSLDWGMKNRLSRIFRPDTGKTVMFAIDHGY
CCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
FQGPTTGLERPDVNIVPLMKHADAIMLTRGILRTTVPPSLTKAVVMRCSGGPSILKELSD
CCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCC
EELAVDIEDAIRMNVACITLQVFIGGEYETRSIHNMTKLVDMGLRYGIPTMAVTAVGKDM
CCEEEEHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VRDAKYFRLATRICAELGAQLVKTYYVPEDFETVVASCPVPIVMAGGKKLPELDALTMSY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHH
NAIQEGAAGVDMGRNIFQSDNPEEMMLAVNKIVHEGYNPNEAYEYFNSLVAGK
HHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]