| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212016
Identifier: 193212016
GI number: 193212016
Start: 366489
End: 367397
Strand: Direct
Name: 193212016
Synonym: Cpar_0345
Alternate gene names: NA
Gene position: 366489-367397 (Clockwise)
Preceding gene: 193212015
Following gene: 193212022
Centisome position: 16.01
GC content: 44.77
Gene sequence:
>909_bases ATGTTTGACGTTTTTACTGAAGAAGTGGAAGTCCTTATCAAGGATGGAATCGCTAACCTATACTGGTACAAAGGCGATCT GCATAAGGCTTGGTTGCGTTCAGGAGTCGATATATCTGTTCGCGATGAAATATTACGCTTGAAAACCGATGATGGTCGAG AGCTAACTAAGCGCCGTCAAATGGATGCTCTCTACGAGCGTTTAAGAAATGGTGACTACAACCGACGTTTAGAGGTTTCG AGAAATTTTGTTCGCATTCTGGTTGGGCACAAAAGCTTTGCCCCGCAAAGTGAAAAGCATCGGGTGGAAATCGCAGAACG TAGTGCTTTGAAACTACGTGAACTTATTCAGCAGCAGGAAAAGGATCGAGAGTATCGCGACAGCATTCGTGCAAGTGCGG AGAAGGCCTCCCGCGAAACCTATGATTCAAAGCTTGATGAGCTTCGAGAAAAGTTTACCGAGGCACTAGACCTGCCGCCC CAAAAAAAGGGTTACGTCCTCGAAGCATTGTTCACTGAACTTATGAGAATCAGCGGTATTCCTGTTGAGGAGCCGTTCAA GATTCAAGGTGAACAACTCGATGGCGCAATCAAGTATGACGGACACTACTATTTGGTTGAGTTGAAGTGGGTCGCTGGGA AGACCGAGCCGAAAGAGATCGGTCATTTTTATTACAAAGTTGAAGGAAAACTACAGGCTCGGGGATTGTTCTTGGCAATG AATGGATATTCAGATGGTGCGATAGCAACTCTTCCAAAGGGTAAAGACTTGAAGGTTTTGCTACTTGATGGCAATCACTT GGCGAATGTCATATACGGTATGTACAAGTTTCAGGAACTTCTTGAACATTCTATTCGTCAAGCGTCATTGCGTGGAGAAA TTTACTGTACACATAACCTGCAAACCTAG
Upstream 100 bases:
>100_bases AGATTGATGATGGGTGAAGGATCAGTTTTACGGCAGAAGTCGCTGTGTTTTATGATGAAATGGTAAATTATGTGACGTTC GCATAATCTATCAATGAGCC
Downstream 100 bases:
>100_bases ATGGGTTCTACCCTCCTCAACTGTTAGCTGACAGAATGTGCAGGTGAATTCATTTGGTTCATATTGCCCTAAAACAACAC CGCCCGCTTACGGTAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MFDVFTEEVEVLIKDGIANLYWYKGDLHKAWLRSGVDISVRDEILRLKTDDGRELTKRRQMDALYERLRNGDYNRRLEVS RNFVRILVGHKSFAPQSEKHRVEIAERSALKLRELIQQQEKDREYRDSIRASAEKASRETYDSKLDELREKFTEALDLPP QKKGYVLEALFTELMRISGIPVEEPFKIQGEQLDGAIKYDGHYYLVELKWVAGKTEPKEIGHFYYKVEGKLQARGLFLAM NGYSDGAIATLPKGKDLKVLLLDGNHLANVIYGMYKFQELLEHSIRQASLRGEIYCTHNLQT
Sequences:
>Translated_302_residues MFDVFTEEVEVLIKDGIANLYWYKGDLHKAWLRSGVDISVRDEILRLKTDDGRELTKRRQMDALYERLRNGDYNRRLEVS RNFVRILVGHKSFAPQSEKHRVEIAERSALKLRELIQQQEKDREYRDSIRASAEKASRETYDSKLDELREKFTEALDLPP QKKGYVLEALFTELMRISGIPVEEPFKIQGEQLDGAIKYDGHYYLVELKWVAGKTEPKEIGHFYYKVEGKLQARGLFLAM NGYSDGAIATLPKGKDLKVLLLDGNHLANVIYGMYKFQELLEHSIRQASLRGEIYCTHNLQT >Mature_302_residues MFDVFTEEVEVLIKDGIANLYWYKGDLHKAWLRSGVDISVRDEILRLKTDDGRELTKRRQMDALYERLRNGDYNRRLEVS RNFVRILVGHKSFAPQSEKHRVEIAERSALKLRELIQQQEKDREYRDSIRASAEKASRETYDSKLDELREKFTEALDLPP QKKGYVLEALFTELMRISGIPVEEPFKIQGEQLDGAIKYDGHYYLVELKWVAGKTEPKEIGHFYYKVEGKLQARGLFLAM NGYSDGAIATLPKGKDLKVLLLDGNHLANVIYGMYKFQELLEHSIRQASLRGEIYCTHNLQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35135; Mature: 35135
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVFTEEVEVLIKDGIANLYWYKGDLHKAWLRSGVDISVRDEILRLKTDDGRELTKRRQ CCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCEEECHHEEEEECCCCHHHHHHHH MDALYERLRNGDYNRRLEVSRNFVRILVGHKSFAPQSEKHRVEIAERSALKLRELIQQQE HHHHHHHHHCCCCCCCHHHHHHEEEHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KDREYRDSIRASAEKASRETYDSKLDELREKFTEALDLPPQKKGYVLEALFTELMRISGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC PVEEPFKIQGEQLDGAIKYDGHYYLVELKWVAGKTEPKEIGHFYYKVEGKLQARGLFLAM CCCCCCEECCCCCCCEEEECCEEEEEEEEEECCCCCHHHHCEEEEEEECEEEEEEEEEEE NGYSDGAIATLPKGKDLKVLLLDGNHLANVIYGMYKFQELLEHSIRQASLRGEIYCTHNL CCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC QT CC >Mature Secondary Structure MFDVFTEEVEVLIKDGIANLYWYKGDLHKAWLRSGVDISVRDEILRLKTDDGRELTKRRQ CCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCEEECHHEEEEECCCCHHHHHHHH MDALYERLRNGDYNRRLEVSRNFVRILVGHKSFAPQSEKHRVEIAERSALKLRELIQQQE HHHHHHHHHCCCCCCCHHHHHHEEEHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KDREYRDSIRASAEKASRETYDSKLDELREKFTEALDLPPQKKGYVLEALFTELMRISGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC PVEEPFKIQGEQLDGAIKYDGHYYLVELKWVAGKTEPKEIGHFYYKVEGKLQARGLFLAM CCCCCCEECCCCCCCEEEECCEEEEEEEEEECCCCCHHHHCEEEEEEECEEEEEEEEEEE NGYSDGAIATLPKGKDLKVLLLDGNHLANVIYGMYKFQELLEHSIRQASLRGEIYCTHNL CCCCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC QT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA