| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211993
Identifier: 193211993
GI number: 193211993
Start: 340198
End: 341007
Strand: Direct
Name: 193211993
Synonym: Cpar_0322
Alternate gene names: NA
Gene position: 340198-341007 (Clockwise)
Preceding gene: 193211987
Following gene: 193211994
Centisome position: 14.86
GC content: 60.62
Gene sequence:
>810_bases ATGAACCAACGTCTTGTTGCCGGAGTTCTCGCCGGCTTATCCCTCGCCTTTATCGCGGCCGAACTTCTGGTCGCCACGCT TGGCGGTTTCGATACCGGATGGATGGTGCTGCTGCTTTCGTTCTATGCCGGGTTGGTCGGGCTGTTGTTCGGAGTGCGTA CGCTGTCGGAAGGCAGGCGGGAGGTGGTCGAGAGCGTCTCGGAGCGGCGGGCGCGGGCCAAGCGCGACGGGCTGGTGGGC GATCTGCTCGACGACTACGAGATCGACGAAGAGTTCATCGGGCGCGGCAAGCGCAAATTCTCAGCTTCAAAACCGGCCAC GTCGCAACCATCAGCTTCGCCATCATCCGGAGCGTCAGGCGACCGGCCTCTCGATGACGATGAACTGAAGTCAGCCATTA CGGCTCATGCCGACATGATGGGCGGACTCGGGAACCTGCGCACAAGGATCGAGGCGATGGACGATCTTGATTTCTATTCG ATGGCCCGCAAGGTCGGTATGGCGGGGGTGAGCCGCACGCGCGCGCTTGCCGTGGTGACTGAGCTGGTGTCAGCATCCGG TGGCGCGATGCTTGACGAAGCTTCTCCGCTGTCGCTTTCCATTGACAAGGGTTCGTTCGACGATTACATCAAACGCTGCA TGAACAATCCCGATACCCGCGTCGATGATGAGGCCAACGACAGCGAGAGCTTTTCGGTAGGTCTCGATGCGGGCGATCTT TCGTCGCAGCCGGGTACGCCGCCGACCGAGTTTTCCCACGATCCGAAAGCGGTCATTGAGCGCTTCAAACGGTCGGCAGG CAAGCGATGA
Upstream 100 bases:
>100_bases GCGAGATCAGTTCTGGTTTGGTGACGGGCATGGGCAGCAAGGATGAAAAGCGAATTATTCGTTACTTTAAAGTCCAAAAT ATACCATCTGATTTGAAGAT
Downstream 100 bases:
>100_bases GGCGAGAAACGTATCCACCGCTGAGCAAGACGATGCTGGGACGGCTGGCCAAGTTGTCGCGCAAGAAGTATCGCGACAGC GAAGGGCTTTTTCTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MNQRLVAGVLAGLSLAFIAAELLVATLGGFDTGWMVLLLSFYAGLVGLLFGVRTLSEGRREVVESVSERRARAKRDGLVG DLLDDYEIDEEFIGRGKRKFSASKPATSQPSASPSSGASGDRPLDDDELKSAITAHADMMGGLGNLRTRIEAMDDLDFYS MARKVGMAGVSRTRALAVVTELVSASGGAMLDEASPLSLSIDKGSFDDYIKRCMNNPDTRVDDEANDSESFSVGLDAGDL SSQPGTPPTEFSHDPKAVIERFKRSAGKR
Sequences:
>Translated_269_residues MNQRLVAGVLAGLSLAFIAAELLVATLGGFDTGWMVLLLSFYAGLVGLLFGVRTLSEGRREVVESVSERRARAKRDGLVG DLLDDYEIDEEFIGRGKRKFSASKPATSQPSASPSSGASGDRPLDDDELKSAITAHADMMGGLGNLRTRIEAMDDLDFYS MARKVGMAGVSRTRALAVVTELVSASGGAMLDEASPLSLSIDKGSFDDYIKRCMNNPDTRVDDEANDSESFSVGLDAGDL SSQPGTPPTEFSHDPKAVIERFKRSAGKR >Mature_269_residues MNQRLVAGVLAGLSLAFIAAELLVATLGGFDTGWMVLLLSFYAGLVGLLFGVRTLSEGRREVVESVSERRARAKRDGLVG DLLDDYEIDEEFIGRGKRKFSASKPATSQPSASPSSGASGDRPLDDDELKSAITAHADMMGGLGNLRTRIEAMDDLDFYS MARKVGMAGVSRTRALAVVTELVSASGGAMLDEASPLSLSIDKGSFDDYIKRCMNNPDTRVDDEANDSESFSVGLDAGDL SSQPGTPPTEFSHDPKAVIERFKRSAGKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28733; Mature: 28733
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRLVAGVLAGLSLAFIAAELLVATLGGFDTGWMVLLLSFYAGLVGLLFGVRTLSEGRR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVVESVSERRARAKRDGLVGDLLDDYEIDEEFIGRGKRKFSASKPATSQPSASPSSGASG HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC DRPLDDDELKSAITAHADMMGGLGNLRTRIEAMDDLDFYSMARKVGMAGVSRTRALAVVT CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELVSASGGAMLDEASPLSLSIDKGSFDDYIKRCMNNPDTRVDDEANDSESFSVGLDAGDL HHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC SSQPGTPPTEFSHDPKAVIERFKRSAGKR CCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNQRLVAGVLAGLSLAFIAAELLVATLGGFDTGWMVLLLSFYAGLVGLLFGVRTLSEGRR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVVESVSERRARAKRDGLVGDLLDDYEIDEEFIGRGKRKFSASKPATSQPSASPSSGASG HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC DRPLDDDELKSAITAHADMMGGLGNLRTRIEAMDDLDFYSMARKVGMAGVSRTRALAVVT CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELVSASGGAMLDEASPLSLSIDKGSFDDYIKRCMNNPDTRVDDEANDSESFSVGLDAGDL HHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC SSQPGTPPTEFSHDPKAVIERFKRSAGKR CCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA