Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is 193211969

Identifier: 193211969

GI number: 193211969

Start: 314248

End: 314880

Strand: Direct

Name: 193211969

Synonym: Cpar_0296

Alternate gene names: NA

Gene position: 314248-314880 (Clockwise)

Preceding gene: 193211968

Following gene: 193211975

Centisome position: 13.73

GC content: 30.49

Gene sequence:

>633_bases
ATGAAAAGTAAAAACGATATGGATTTATTTAAACTTTACTTTGACGAAAATTTCAATCTTATTGTGCATATTTCAATATG
GCTTGTTGTTTTTGTGATTGTTATATTGCTAGTTTATTTTCTAGTAATAAAAAAAACATACAGGTATAGCCTAGTAAAAC
TTGACATTAAGCTGGGCAATGTTGGTTCTGCAGAATTCAGACCTAATAAAACAGATTTACAAATAGCCCATAAAATTTGG
ACAGAATTAATTACAAGAAAAGCGGCAATACCAATAGACAAAGAAAATGATATAATTGAAGAAATATATGATTCATGGTA
TGCACTTTTTCAAAAAGTTAGAGAATTTATTAGCGAAGTTCCAGCAGAGTTAATTCGTAAAAATAAAAGCACAAAAGAGA
TTGTTCGGATAGCAACTCAAACGCTAAATGAAGGTTTACGTCCCCATCTTACAATGTGGCAAGCCAGATTTCGAACCTGG
AGTTCTGCCAAGAAAGAAAAAGCCATGGATAAAACTCCTCAAGAATTCCAAAAAGAATATCCTCAATATAAGGACTTAAT
TGATGATTTAATGAAAGTAAACACACAGTTAATACAATATGCACAAGAACTGAAGAGGATAATAGAAAAATAA

Upstream 100 bases:

>100_bases
AAATTTGTGAAACCTGATGAATTAGCAACACAATTTGTTGAATGGTTACAATCCAATTTTCAAAAAGGCTTGCAAGGTTT
ACCAATTAGTTGGACTAAAT

Downstream 100 bases:

>100_bases
GTCTCTCGCTATTGTAGGCACATTTGTAATTCGCACAAGCCCTTACTAAGTCAAAAATTATAAAAGAGCTTACAATGCCA
AAACTAAAAAAAAGTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKSKNDMDLFKLYFDENFNLIVHISIWLVVFVIVILLVYFLVIKKTYRYSLVKLDIKLGNVGSAEFRPNKTDLQIAHKIW
TELITRKAAIPIDKENDIIEEIYDSWYALFQKVREFISEVPAELIRKNKSTKEIVRIATQTLNEGLRPHLTMWQARFRTW
SSAKKEKAMDKTPQEFQKEYPQYKDLIDDLMKVNTQLIQYAQELKRIIEK

Sequences:

>Translated_210_residues
MKSKNDMDLFKLYFDENFNLIVHISIWLVVFVIVILLVYFLVIKKTYRYSLVKLDIKLGNVGSAEFRPNKTDLQIAHKIW
TELITRKAAIPIDKENDIIEEIYDSWYALFQKVREFISEVPAELIRKNKSTKEIVRIATQTLNEGLRPHLTMWQARFRTW
SSAKKEKAMDKTPQEFQKEYPQYKDLIDDLMKVNTQLIQYAQELKRIIEK
>Mature_210_residues
MKSKNDMDLFKLYFDENFNLIVHISIWLVVFVIVILLVYFLVIKKTYRYSLVKLDIKLGNVGSAEFRPNKTDLQIAHKIW
TELITRKAAIPIDKENDIIEEIYDSWYALFQKVREFISEVPAELIRKNKSTKEIVRIATQTLNEGLRPHLTMWQARFRTW
SSAKKEKAMDKTPQEFQKEYPQYKDLIDDLMKVNTQLIQYAQELKRIIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25050; Mature: 25050

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKNDMDLFKLYFDENFNLIVHISIWLVVFVIVILLVYFLVIKKTYRYSLVKLDIKLGN
CCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
VGSAEFRPNKTDLQIAHKIWTELITRKAAIPIDKENDIIEEIYDSWYALFQKVREFISEV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PAELIRKNKSTKEIVRIATQTLNEGLRPHLTMWQARFRTWSSAKKEKAMDKTPQEFQKEY
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
PQYKDLIDDLMKVNTQLIQYAQELKRIIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSKNDMDLFKLYFDENFNLIVHISIWLVVFVIVILLVYFLVIKKTYRYSLVKLDIKLGN
CCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
VGSAEFRPNKTDLQIAHKIWTELITRKAAIPIDKENDIIEEIYDSWYALFQKVREFISEV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PAELIRKNKSTKEIVRIATQTLNEGLRPHLTMWQARFRTWSSAKKEKAMDKTPQEFQKEY
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
PQYKDLIDDLMKVNTQLIQYAQELKRIIEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA