| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is dfrA [H]
Identifier: 193211954
GI number: 193211954
Start: 298777
End: 299778
Strand: Direct
Name: dfrA [H]
Synonym: Cpar_0280
Alternate gene names: 193211954
Gene position: 298777-299778 (Clockwise)
Preceding gene: 193211951
Following gene: 193211955
Centisome position: 13.05
GC content: 59.78
Gene sequence:
>1002_bases ATGTCAGCAATTCCGATACTCATTACCGGTGCAACGGGTTACATAGGTTCACGGCTTCTGCTTGATCTTATCGGCAGGTT CGGTGAAGGCGTGCGTTGCCGAGTTGCGGTCAGAGCGGGTTCGGACGCTTCGTTCCTCAAGGGCTTTCCGGTCGAGATCG TTCGCGCGGATGTGCACGATCCAATCGCCATTGGAGAAGCGGTCAAGGGGATGGAGGTGGTGTTTCACTGCGCTGGAATG ATCGCTTTTACCAGCAACTTCCGCAACCGGTTGCATGATACCAACGTGCTTGGCACTCGCCATGTGGTCGATTCGTGCCT TGAACACGGCGTGAAGCGCATGGTGATGACCAGCTCGATTGCCGCTGTCGGTTCCGAGACCGTGGATGGCGTCGTTGTTG AATCCACCGAGCACTCCACGTTTACCGAATGGCAGCGCCACAACGTTTATATGGAGTCCAAGCACCTGGCCGAACTCGAA TGCCGGCGCGGCCTGGCTGAAGGGCTCGACGTGGTGATGGTCAATCCCGGCGTGGTGATCGGCCGGAACCCGGAGCCGGG TATGCCCGTCAGTTCATCGAACGAAACCTTGCGCCTGATCTACGAGGGGCGCGTGCCGTTCTGTCCTGAAGGATCGACTG GCTTTGTTGACGTCAGGGATGCGGCAGACGCCCATATCGCAGCGTGGACGAAGGGGAAATCGGGCGAGCGCTACATCATT GTCGGTGAAAATCTCTCCTTCCGGGAGCTGTTCAGCCGCATCGCCGCTCTGCCTGGCAGCCGCACCGGCAAGCCGATGGT CGTCGGCAACTTGGCCGGAGCTGCAGCCGGAGCTGGCGGCGAGCTCTTTTCGATGCTGACCGGACGCCCTTCGTTCGTCA GCATCGAGAGCATTCGGCAGGCTTCGCGTTCCGCTCGGTTCAGCAACCTGCGCTCGATTCAGGAGCTTGGCATCAGCTAC CGGCCGTTTGACGAAACCCTCAGGAGCGCCGTGGCGTTGTAA
Upstream 100 bases:
>100_bases ATTCGTTTTATTCTTCTTATTATTAAAAACAAATCGGCGCTGGGCCGCATCGCTTCACAGATGCCGGAGTTTTCAGAAGG GCGCCACTGCTCCATCGTTC
Downstream 100 bases:
>100_bases TCCGAATAGCAAATTTTCAATTCACATACCCCTACTATTTTCATGGATAAAGAGAACTCAAAGCAGACAGCACAGCCGCC GGTGGTCGATCCGGCAAGGC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: DFR; Dihydrokaempferol 4-reductase [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSAIPILITGATGYIGSRLLLDLIGRFGEGVRCRVAVRAGSDASFLKGFPVEIVRADVHDPIAIGEAVKGMEVVFHCAGM IAFTSNFRNRLHDTNVLGTRHVVDSCLEHGVKRMVMTSSIAAVGSETVDGVVVESTEHSTFTEWQRHNVYMESKHLAELE CRRGLAEGLDVVMVNPGVVIGRNPEPGMPVSSSNETLRLIYEGRVPFCPEGSTGFVDVRDAADAHIAAWTKGKSGERYII VGENLSFRELFSRIAALPGSRTGKPMVVGNLAGAAAGAGGELFSMLTGRPSFVSIESIRQASRSARFSNLRSIQELGISY RPFDETLRSAVAL
Sequences:
>Translated_333_residues MSAIPILITGATGYIGSRLLLDLIGRFGEGVRCRVAVRAGSDASFLKGFPVEIVRADVHDPIAIGEAVKGMEVVFHCAGM IAFTSNFRNRLHDTNVLGTRHVVDSCLEHGVKRMVMTSSIAAVGSETVDGVVVESTEHSTFTEWQRHNVYMESKHLAELE CRRGLAEGLDVVMVNPGVVIGRNPEPGMPVSSSNETLRLIYEGRVPFCPEGSTGFVDVRDAADAHIAAWTKGKSGERYII VGENLSFRELFSRIAALPGSRTGKPMVVGNLAGAAAGAGGELFSMLTGRPSFVSIESIRQASRSARFSNLRSIQELGISY RPFDETLRSAVAL >Mature_332_residues SAIPILITGATGYIGSRLLLDLIGRFGEGVRCRVAVRAGSDASFLKGFPVEIVRADVHDPIAIGEAVKGMEVVFHCAGMI AFTSNFRNRLHDTNVLGTRHVVDSCLEHGVKRMVMTSSIAAVGSETVDGVVVESTEHSTFTEWQRHNVYMESKHLAELEC RRGLAEGLDVVMVNPGVVIGRNPEPGMPVSSSNETLRLIYEGRVPFCPEGSTGFVDVRDAADAHIAAWTKGKSGERYIIV GENLSFRELFSRIAALPGSRTGKPMVVGNLAGAAAGAGGELFSMLTGRPSFVSIESIRQASRSARFSNLRSIQELGISYR PFDETLRSAVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dihydroflavonol-4-reductase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI71987463, Length=249, Percent_Identity=29.3172690763052, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR017829 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: =1.1.1.219 [H]
Molecular weight: Translated: 35836; Mature: 35705
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPILITGATGYIGSRLLLDLIGRFGEGVRCRVAVRAGSDASFLKGFPVEIVRADVHD CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCEEEEECCCC PIAIGEAVKGMEVVFHCAGMIAFTSNFRNRLHDTNVLGTRHVVDSCLEHGVKRMVMTSSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAVGSETVDGVVVESTEHSTFTEWQRHNVYMESKHLAELECRRGLAEGLDVVMVNPGVVI HHHCCCCCCCEEEECCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHCCCEEEEECCCEEE GRNPEPGMPVSSSNETLRLIYEGRVPFCPEGSTGFVDVRDAADAHIAAWTKGKSGERYII CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEE VGENLSFRELFSRIAALPGSRTGKPMVVGNLAGAAAGAGGELFSMLTGRPSFVSIESIRQ ECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEHHHHHH ASRSARFSNLRSIQELGISYRPFDETLRSAVAL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SAIPILITGATGYIGSRLLLDLIGRFGEGVRCRVAVRAGSDASFLKGFPVEIVRADVHD CCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCEEEEECCCC PIAIGEAVKGMEVVFHCAGMIAFTSNFRNRLHDTNVLGTRHVVDSCLEHGVKRMVMTSSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAVGSETVDGVVVESTEHSTFTEWQRHNVYMESKHLAELECRRGLAEGLDVVMVNPGVVI HHHCCCCCCCEEEECCCCCHHHHHHHCCCEECCCHHHHHHHHHHHHCCCEEEEECCCEEE GRNPEPGMPVSSSNETLRLIYEGRVPFCPEGSTGFVDVRDAADAHIAAWTKGKSGERYII CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEE VGENLSFRELFSRIAALPGSRTGKPMVVGNLAGAAAGAGGELFSMLTGRPSFVSIESIRQ ECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCEEEHHHHHH ASRSARFSNLRSIQELGISYRPFDETLRSAVAL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]