| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211913
Identifier: 193211913
GI number: 193211913
Start: 247999
End: 250077
Strand: Direct
Name: 193211913
Synonym: Cpar_0239
Alternate gene names: NA
Gene position: 247999-250077 (Clockwise)
Preceding gene: 193211909
Following gene: 193211914
Centisome position: 10.83
GC content: 56.57
Gene sequence:
>2079_bases ATGAAACAGCGTCACTTCTCTTTTCGTCTCACTTTGCTGTTTGCGTTCTTTACTCTTTCTCTCGCAGCCTGTGATCAGCA GGAGTCCGAACCCAAACCTTCAGCCCTGTACGAGGAGGCTCAACGCCTTGAAGGCCGGAAAAACTATTCGGAAGCGCTTG ATTACTATAACCGCGGGCTGGCTGCTGATACGCTGAAGGGCTTCAGTGCGGAGGCGCTCGAAGCGTTGTGCCGGAAAGGG CGCATCGAGTTCCTGACCGGTCGTTACCAGGCGGCGTTCACTACCTGGCAGAGTATTGAAGCCCATGCTGCGGCAGGAAA GCTTAGCGACTCCCTGCGCACGGCCGCTGGGCTGGACACGGCGCAGATGTATGCTGAACTTGGCCGTTACGGCAAGGCGG CATCGATCATGGAATCTCTCGGCAGTGCCGACCAGTGGCAGCGTTACCAAACCGCGGTGTACCGGTTCAAGGCCGGTAAG ATCGATGAGGCATCGCAATGGTATCAGAAATTGTCGGCGTCCGGCGATCCGTCTGTCAGAATGGCCGCCCTCTCCGGACT GCTCGATTGCGCCCTTGTTGCTCCCGCCACCGCGCCGGACAACCCGGAGCATTATGCAGCTCAAATTGCTGCCGTATCGG CGAAGGTGATGAGAATGAATGCAACCCCCATGGTGAAAATCCGCTCGTTGCGCATTGCCGCCAAGAGCCTTCTGCAGCTT GAATCGCAGCAGCGGAATGCCAGCTATCTGCTGTTCCGTGCGCTGGCGATCGCTCAGGAGAAAGGATTGTCGAGGCTTGT GCCGATTCTCCAATACGAATCCAATGCGGTCATCGTGCGCAAGCCCGACACCTACCGCAATGTCATCGCCTATTTCGGAT CGAAAAACATGCAGTATGCCAAAGCCGCAGCCCTGTGCAAGCTTGGCACCTGCGAAGAGCTAACCCCGGCCGAGCGCATC ACGGCGCTGCGCAGTGCGCTGACCACCAGCCAGTATTACGGCATTCCGGCCACTGCGACCGGCTATCTGAAGATGGTCAG GGAGGCCACACGCCAGCTCGATGATCTCCTGATTGCCAGCGGCCGCTTTGTCGAACTGTTCGATGTCAGCGGTCAGGATG ATGCTCTTGAAACCCGCTCCCGCATGCAGGCCGCGATTTCCGAATTCCGCCTGCCGGCCGGGCATGAGGCTTTGCAGAAC GAAATTATCAGCGTGACGACTGATATTTCGGGGCTGCTCCAGCGAAAAATCGACATGAACGAGCAGGGAGAAGGGTTCCG TTATGCAGCCCTTATTGACAAGTCGATCACCGAAAAGCAGGGGCGGCTGATCGAGCTGCTTGCCGAAGTCTCGAAGATTG ACAGCCATGTGGCTTCGAATCTGCAATCGGAGCCGCTCACCCTGAACACCCTGCGCCAAAGGCTTCAGCCCGACGAGGCG CTGGTCAGGTTTTTTGCCGGGGATTCGAGCACGACGGCAATCATGGTCAGCAACCGGGAAATGCAGATCGAGACATCGCC GGTAACGGCTGACGAACTGAAAGCGCAGTTTGGCGCATTGCAACGACGCGTTCGAACCATCGGAATCAGCAAGGACTCCA GGCTTCTGTCCGATCAGGGGCGCATCTGGTTGACCGATTCGCTGTTGAAAACCATGAGCACCAGGCTTGCCTCCTACCGC CATCTGATTTTCGTCAGTGAGCAGCCGCAGCCGTTCCATCTGCTTGGCCGCGATGAGTTGCTCGGCCGCGGTCGTCAAGT CACCTACCTGATTTCACCGAACGAAGCGGTCAGCGCCAAGCCTGCTGATGGTAAGCAGGATGCTGTGGCAGGGATCGAGT TTTTTAATGCAAACAGGATAGAAAACGCTCAAATCCACAAGCTTTTCCATCCGGGTGATCAGGTGATTCTTTTCTGGAAA CCGCTTTCAGATCGTGAAATAGAGCGCCTGAAAACAGCTCTTGAAAAAGCGCCAGCCGCCAATCGATCCGCCGCTGGTTT TTTGAAGCTGTTTGCTGATGGTGACAATACCGAGAACGGCCAGGTATGGTTCTGGATCGGCGCGTACGGTGTTGATTAA
Upstream 100 bases:
>100_bases TGTTTTTCCGTGTTTTCTTCTTATACAACTTTCTTGCCTTTGCGTTGCAATCGAGACGCGCAGAGGGAGGCAGCTCAAAC CATTACCGGCAGGCCCAGCC
Downstream 100 bases:
>100_bases GCTTGCCGAAGCGTGGGTTATCGGCACTTTTTCCCCTTGGTTATGGAGGGGCTGACGTCCAAAACGTTTTGCCCTGACAG GTGTTCGAATTCTTGTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MKQRHFSFRLTLLFAFFTLSLAACDQQESEPKPSALYEEAQRLEGRKNYSEALDYYNRGLAADTLKGFSAEALEALCRKG RIEFLTGRYQAAFTTWQSIEAHAAAGKLSDSLRTAAGLDTAQMYAELGRYGKAASIMESLGSADQWQRYQTAVYRFKAGK IDEASQWYQKLSASGDPSVRMAALSGLLDCALVAPATAPDNPEHYAAQIAAVSAKVMRMNATPMVKIRSLRIAAKSLLQL ESQQRNASYLLFRALAIAQEKGLSRLVPILQYESNAVIVRKPDTYRNVIAYFGSKNMQYAKAAALCKLGTCEELTPAERI TALRSALTTSQYYGIPATATGYLKMVREATRQLDDLLIASGRFVELFDVSGQDDALETRSRMQAAISEFRLPAGHEALQN EIISVTTDISGLLQRKIDMNEQGEGFRYAALIDKSITEKQGRLIELLAEVSKIDSHVASNLQSEPLTLNTLRQRLQPDEA LVRFFAGDSSTTAIMVSNREMQIETSPVTADELKAQFGALQRRVRTIGISKDSRLLSDQGRIWLTDSLLKTMSTRLASYR HLIFVSEQPQPFHLLGRDELLGRGRQVTYLISPNEAVSAKPADGKQDAVAGIEFFNANRIENAQIHKLFHPGDQVILFWK PLSDREIERLKTALEKAPAANRSAAGFLKLFADGDNTENGQVWFWIGAYGVD
Sequences:
>Translated_692_residues MKQRHFSFRLTLLFAFFTLSLAACDQQESEPKPSALYEEAQRLEGRKNYSEALDYYNRGLAADTLKGFSAEALEALCRKG RIEFLTGRYQAAFTTWQSIEAHAAAGKLSDSLRTAAGLDTAQMYAELGRYGKAASIMESLGSADQWQRYQTAVYRFKAGK IDEASQWYQKLSASGDPSVRMAALSGLLDCALVAPATAPDNPEHYAAQIAAVSAKVMRMNATPMVKIRSLRIAAKSLLQL ESQQRNASYLLFRALAIAQEKGLSRLVPILQYESNAVIVRKPDTYRNVIAYFGSKNMQYAKAAALCKLGTCEELTPAERI TALRSALTTSQYYGIPATATGYLKMVREATRQLDDLLIASGRFVELFDVSGQDDALETRSRMQAAISEFRLPAGHEALQN EIISVTTDISGLLQRKIDMNEQGEGFRYAALIDKSITEKQGRLIELLAEVSKIDSHVASNLQSEPLTLNTLRQRLQPDEA LVRFFAGDSSTTAIMVSNREMQIETSPVTADELKAQFGALQRRVRTIGISKDSRLLSDQGRIWLTDSLLKTMSTRLASYR HLIFVSEQPQPFHLLGRDELLGRGRQVTYLISPNEAVSAKPADGKQDAVAGIEFFNANRIENAQIHKLFHPGDQVILFWK PLSDREIERLKTALEKAPAANRSAAGFLKLFADGDNTENGQVWFWIGAYGVD >Mature_692_residues MKQRHFSFRLTLLFAFFTLSLAACDQQESEPKPSALYEEAQRLEGRKNYSEALDYYNRGLAADTLKGFSAEALEALCRKG RIEFLTGRYQAAFTTWQSIEAHAAAGKLSDSLRTAAGLDTAQMYAELGRYGKAASIMESLGSADQWQRYQTAVYRFKAGK IDEASQWYQKLSASGDPSVRMAALSGLLDCALVAPATAPDNPEHYAAQIAAVSAKVMRMNATPMVKIRSLRIAAKSLLQL ESQQRNASYLLFRALAIAQEKGLSRLVPILQYESNAVIVRKPDTYRNVIAYFGSKNMQYAKAAALCKLGTCEELTPAERI TALRSALTTSQYYGIPATATGYLKMVREATRQLDDLLIASGRFVELFDVSGQDDALETRSRMQAAISEFRLPAGHEALQN EIISVTTDISGLLQRKIDMNEQGEGFRYAALIDKSITEKQGRLIELLAEVSKIDSHVASNLQSEPLTLNTLRQRLQPDEA LVRFFAGDSSTTAIMVSNREMQIETSPVTADELKAQFGALQRRVRTIGISKDSRLLSDQGRIWLTDSLLKTMSTRLASYR HLIFVSEQPQPFHLLGRDELLGRGRQVTYLISPNEAVSAKPADGKQDAVAGIEFFNANRIENAQIHKLFHPGDQVILFWK PLSDREIERLKTALEKAPAANRSAAGFLKLFADGDNTENGQVWFWIGAYGVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76795; Mature: 76795
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRHFSFRLTLLFAFFTLSLAACDQQESEPKPSALYEEAQRLEGRKNYSEALDYYNRGL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC AADTLKGFSAEALEALCRKGRIEFLTGRYQAAFTTWQSIEAHAAAGKLSDSLRTAAGLDT CHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AQMYAELGRYGKAASIMESLGSADQWQRYQTAVYRFKAGKIDEASQWYQKLSASGDPSVR HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHH MAALSGLLDCALVAPATAPDNPEHYAAQIAAVSAKVMRMNATPMVKIRSLRIAAKSLLQL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHH ESQQRNASYLLFRALAIAQEKGLSRLVPILQYESNAVIVRKPDTYRNVIAYFGSKNMQYA HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHEECCCEEEEECCCHHHHHHHHHCCCCCHHH KAAALCKLGTCEELTPAERITALRSALTTSQYYGIPATATGYLKMVREATRQLDDLLIAS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GRFVELFDVSGQDDALETRSRMQAAISEFRLPAGHEALQNEIISVTTDISGLLQRKIDMN CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC EQGEGFRYAALIDKSITEKQGRLIELLAEVSKIDSHVASNLQSEPLTLNTLRQRLQPDEA CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHH LVRFFAGDSSTTAIMVSNREMQIETSPVTADELKAQFGALQRRVRTIGISKDSRLLSDQG HHHHHCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC RIWLTDSLLKTMSTRLASYRHLIFVSEQPQPFHLLGRDELLGRGRQVTYLISPNEAVSAK CEEEEHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCC PADGKQDAVAGIEFFNANRIENAQIHKLFHPGDQVILFWKPLSDREIERLKTALEKAPAA CCCCCHHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCC NRSAAGFLKLFADGDNTENGQVWFWIGAYGVD CCCCCCEEEEEECCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MKQRHFSFRLTLLFAFFTLSLAACDQQESEPKPSALYEEAQRLEGRKNYSEALDYYNRGL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC AADTLKGFSAEALEALCRKGRIEFLTGRYQAAFTTWQSIEAHAAAGKLSDSLRTAAGLDT CHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AQMYAELGRYGKAASIMESLGSADQWQRYQTAVYRFKAGKIDEASQWYQKLSASGDPSVR HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHH MAALSGLLDCALVAPATAPDNPEHYAAQIAAVSAKVMRMNATPMVKIRSLRIAAKSLLQL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHH ESQQRNASYLLFRALAIAQEKGLSRLVPILQYESNAVIVRKPDTYRNVIAYFGSKNMQYA HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHEECCCEEEEECCCHHHHHHHHHCCCCCHHH KAAALCKLGTCEELTPAERITALRSALTTSQYYGIPATATGYLKMVREATRQLDDLLIAS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC GRFVELFDVSGQDDALETRSRMQAAISEFRLPAGHEALQNEIISVTTDISGLLQRKIDMN CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC EQGEGFRYAALIDKSITEKQGRLIELLAEVSKIDSHVASNLQSEPLTLNTLRQRLQPDEA CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCHHH LVRFFAGDSSTTAIMVSNREMQIETSPVTADELKAQFGALQRRVRTIGISKDSRLLSDQG HHHHHCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC RIWLTDSLLKTMSTRLASYRHLIFVSEQPQPFHLLGRDELLGRGRQVTYLISPNEAVSAK CEEEEHHHHHHHHHHHHHHEEEEEEECCCCCEEECCCHHHHCCCCEEEEEECCCCCCCCC PADGKQDAVAGIEFFNANRIENAQIHKLFHPGDQVILFWKPLSDREIERLKTALEKAPAA CCCCCHHHHHHHHHHCCCCCCCCHHHEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCC NRSAAGFLKLFADGDNTENGQVWFWIGAYGVD CCCCCCEEEEEECCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA