| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211904
Identifier: 193211904
GI number: 193211904
Start: 237948
End: 240587
Strand: Direct
Name: 193211904
Synonym: Cpar_0230
Alternate gene names: NA
Gene position: 237948-240587 (Clockwise)
Preceding gene: 193211903
Following gene: 193211905
Centisome position: 10.39
GC content: 59.43
Gene sequence:
>2640_bases ATGTCTCATAACAAGCTGAACAGGCTCATCGCCGTCCTCATCTTTGTCGTTGCCGAAGCGGTTTATCTCGCGACGATGGC GCCGACCCTTTCCTTCTGGGACTGCGGCGAGGTGATCGCGACCTCCCGCACGCTCGGCGTTCCGCACCCGCCCGGTGCGC CGCTCTATCTGCTGTTCGGTCACCTCTTTTCGCTGCTGCCGACGTTCGGCGACATCGGTGCGCGCATCAACTTTTTCAGC ACGCTGCTCAGTTCGGCCACCATCATGCTGACCTACCTGATCATCGTCAGGCTTATCACCATCGCCCGGAACTCAAAGCC CGCCGAGTGGGACCTTCCGGATAAAATCGCGGCATACGGCGGAGCGGCGGTCGGCGCGCTGGCGCTGGCTTTTTCGGACA GCTTCTGGTTCAACGCGGTCGAGACGAGTCTGTGGGCCGCGTCGTCATTCCTGACGGCAACTATTTTCTGGATGATGCTC TGTTGGTACGACGAAGATCCCGCGCCCGGCAGCGAGCGGTGGTTGCTGGCGGTGATGTACATGATCGGCCTCTCCATCGG CGTGCACCTGCTCTGTCTGCTCGCGCTGTTTTCGCTCGTGCTGCTCTACTATTTCAAAAAATATCCCGTCACGCTGAAGT CGTTCAGCCTGATGGGGCTTTTCAGCCTCGGTCTCTTTTTCCTCATCTATCGCGGCATCATCAAGGAGCTGCCGGTGCTG CTGGTGCACACCTCGTGGTGGGGTCTGGGTTTGCTGATCACGTTGCTGGTGTACGGCGTCTGGTTCAGCCAGCAGAAGCG GCTGGTGCTGCCGAACCTTGTGCTGATGTCAGTTTTGCTCCTCATTCTCGGCTACACCTCCTACCTGCTGATTTTCGTGC GCGCGCACGCCGGACCGCCGATCAACGAGAACGATCCCTCGACGCTCCAGGCCTTTTTCTCTTACGTCAACCGTGAACAG TATGGAAGCTGGCCCCTGTGGCCGAGGCGCTGGTCACCCGAGCCGGTGCATCAGTATTTCTACCGCTTCTACTCGGGCGA CTGGGACTATTTTTTCCGCTACCAGCTCGACCTCATGTACCTGCGCTACTTCGGCTGGCAGTTCATCGGACGCTCGGCTC CCATCGAGGGGGCGGTGATCGACTGGGGGCAGTTGTGGGGCGTGCCGCTGCTGGCCGGTCTGTATGGCGCGGTGTCGCAT TTCAGGCGGAACTGGAAGATGGCGCTTGTCGTCGGCGTGCTGTTTGCCATGACCGGCCTGATCCTCGTGGTCTACCTCAA CCAGCCGGAGCCGCAGCCGCGCGAGCGTGACTACAGTTACGTCGGCAGTTTTTTCGCCTTCGCGCTCTGGATCGGCATCG GCATCGAAAGCCTCTGGGCGTCCGCTTCAAAAGCGTTGAAGAGCGCCGAGGTGCGCAACCGGACGTTGAGTGCTGCCCTG CTGGTGTTCGCCGCGCTGTATCTGATCGATGGCCGGATGGTGATGGCCAACTACCGTACGCACGACCGCTCAGGCAATTA CGTCGCCTGGGACTGGGCCTGGAACATCCTCCAGAGCTGCGAGAAGGATGCGATTCTTTTCACCAACGGCGACAACGATA CCTTTCCGCTCTGGTACATGCAGGAGGTCGAGGGCGTCAGAACCGATGTGCGCGTGGTAAACCTGAGTCTGGCTAACACC GGCTGGTATCTGTTGCAGCTGAAACACGACAGCCCGAGAGGCGCCAAGCCGGTGGAGCTGAAGATTAGTGACGCCGATCT GAAAGCGATTACCTACGTACCGGTCGATTCGGTCGATGTGGCCGTTCCCGCCGGTTCCGAACAGCGCAAGTTGTTCAGTG ATGCCCGCCGCTCCGGAGTGAGCCTGCCTGCAACGCCTTCCGATTCGTTGCGCTGGAGGATCAGGCCGGGACTCAGCTAT CAGGGCACAACCTATCTGCGCCCGCAGGATATTGCCGTCTATATGATCGTAAGCGACAATTATGGCAAGCGCCCGATCTA TTTTGCCCTGACGGTCGATCCGACCGAGATGATCGGTCTGGAGCGGAACCTCCGTCTCGACGGTCTGGTTTACCGGGTCG TGCCGCTCAGGAGCGACTCGGCGCAAGATTTTTCCGATCCTGGTACGCTGTATGGCAACCTGTTCAATACCTACCGGTAC CGCAACATCGGGAATCTTTCCGTGAACATCGACGAGACGTCGCGGAACCTCTTGGGCAACTACCCGCCGCTGTTCGGGCG GCTTGCCCTCGACTTGAGCGCTGCGCCTGGCGATTCGGTGCGTGTGCCTGATAAGTCCGGTGTCCTGCAAACCCGGCAGC GCAGGGCACTCGCGTACGAGGTGCTCGACCGGTACGAAAAGCTGTTCCCGCTGGAACGTTATCCGGTTTCGCCGAGCTTT GCCGCTACGGTTGCATCGCTTCGCATTTCCGAAGGTGCAAAGCAGAAAGCATATCCTTATATTAATTACCTTGAAGTTTT GGCTTCCCGGAGTGATGTCCGGGAGGAGCCGGAGCTGTACCTTCTGCTCTCACAGGTATATCGGAAAGCGGGAGAGAGCG GCAAGGCGGATGCCGTCCTGAATCATCTGAAGCAGGCCCTTCCTGCACTGCGGGAGCGGCTGGATTCCCTAAAGCAATAG
Upstream 100 bases:
>100_bases TGGGTTCCTGTTTGCCGATCTCGTGGCCGGTGAGCTGCTGTCGGAGTGACGGCATCATCCGGCATCCGAAACCGAAGCAA AGCGTTTTCAAGCACCAAAC
Downstream 100 bases:
>100_bases CTGGACTTTTCATGAGTAGTATTCACCCGACAGCGGTCATCGGTTCCGGAGCCACGATTGGCGAGGATGTACAGATCGGC CCCTACACCGTCATCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 879; Mature: 878
Protein sequence:
>879_residues MSHNKLNRLIAVLIFVVAEAVYLATMAPTLSFWDCGEVIATSRTLGVPHPPGAPLYLLFGHLFSLLPTFGDIGARINFFS TLLSSATIMLTYLIIVRLITIARNSKPAEWDLPDKIAAYGGAAVGALALAFSDSFWFNAVETSLWAASSFLTATIFWMML CWYDEDPAPGSERWLLAVMYMIGLSIGVHLLCLLALFSLVLLYYFKKYPVTLKSFSLMGLFSLGLFFLIYRGIIKELPVL LVHTSWWGLGLLITLLVYGVWFSQQKRLVLPNLVLMSVLLLILGYTSYLLIFVRAHAGPPINENDPSTLQAFFSYVNREQ YGSWPLWPRRWSPEPVHQYFYRFYSGDWDYFFRYQLDLMYLRYFGWQFIGRSAPIEGAVIDWGQLWGVPLLAGLYGAVSH FRRNWKMALVVGVLFAMTGLILVVYLNQPEPQPRERDYSYVGSFFAFALWIGIGIESLWASASKALKSAEVRNRTLSAAL LVFAALYLIDGRMVMANYRTHDRSGNYVAWDWAWNILQSCEKDAILFTNGDNDTFPLWYMQEVEGVRTDVRVVNLSLANT GWYLLQLKHDSPRGAKPVELKISDADLKAITYVPVDSVDVAVPAGSEQRKLFSDARRSGVSLPATPSDSLRWRIRPGLSY QGTTYLRPQDIAVYMIVSDNYGKRPIYFALTVDPTEMIGLERNLRLDGLVYRVVPLRSDSAQDFSDPGTLYGNLFNTYRY RNIGNLSVNIDETSRNLLGNYPPLFGRLALDLSAAPGDSVRVPDKSGVLQTRQRRALAYEVLDRYEKLFPLERYPVSPSF AATVASLRISEGAKQKAYPYINYLEVLASRSDVREEPELYLLLSQVYRKAGESGKADAVLNHLKQALPALRERLDSLKQ
Sequences:
>Translated_879_residues MSHNKLNRLIAVLIFVVAEAVYLATMAPTLSFWDCGEVIATSRTLGVPHPPGAPLYLLFGHLFSLLPTFGDIGARINFFS TLLSSATIMLTYLIIVRLITIARNSKPAEWDLPDKIAAYGGAAVGALALAFSDSFWFNAVETSLWAASSFLTATIFWMML CWYDEDPAPGSERWLLAVMYMIGLSIGVHLLCLLALFSLVLLYYFKKYPVTLKSFSLMGLFSLGLFFLIYRGIIKELPVL LVHTSWWGLGLLITLLVYGVWFSQQKRLVLPNLVLMSVLLLILGYTSYLLIFVRAHAGPPINENDPSTLQAFFSYVNREQ YGSWPLWPRRWSPEPVHQYFYRFYSGDWDYFFRYQLDLMYLRYFGWQFIGRSAPIEGAVIDWGQLWGVPLLAGLYGAVSH FRRNWKMALVVGVLFAMTGLILVVYLNQPEPQPRERDYSYVGSFFAFALWIGIGIESLWASASKALKSAEVRNRTLSAAL LVFAALYLIDGRMVMANYRTHDRSGNYVAWDWAWNILQSCEKDAILFTNGDNDTFPLWYMQEVEGVRTDVRVVNLSLANT GWYLLQLKHDSPRGAKPVELKISDADLKAITYVPVDSVDVAVPAGSEQRKLFSDARRSGVSLPATPSDSLRWRIRPGLSY QGTTYLRPQDIAVYMIVSDNYGKRPIYFALTVDPTEMIGLERNLRLDGLVYRVVPLRSDSAQDFSDPGTLYGNLFNTYRY RNIGNLSVNIDETSRNLLGNYPPLFGRLALDLSAAPGDSVRVPDKSGVLQTRQRRALAYEVLDRYEKLFPLERYPVSPSF AATVASLRISEGAKQKAYPYINYLEVLASRSDVREEPELYLLLSQVYRKAGESGKADAVLNHLKQALPALRERLDSLKQ >Mature_878_residues SHNKLNRLIAVLIFVVAEAVYLATMAPTLSFWDCGEVIATSRTLGVPHPPGAPLYLLFGHLFSLLPTFGDIGARINFFST LLSSATIMLTYLIIVRLITIARNSKPAEWDLPDKIAAYGGAAVGALALAFSDSFWFNAVETSLWAASSFLTATIFWMMLC WYDEDPAPGSERWLLAVMYMIGLSIGVHLLCLLALFSLVLLYYFKKYPVTLKSFSLMGLFSLGLFFLIYRGIIKELPVLL VHTSWWGLGLLITLLVYGVWFSQQKRLVLPNLVLMSVLLLILGYTSYLLIFVRAHAGPPINENDPSTLQAFFSYVNREQY GSWPLWPRRWSPEPVHQYFYRFYSGDWDYFFRYQLDLMYLRYFGWQFIGRSAPIEGAVIDWGQLWGVPLLAGLYGAVSHF RRNWKMALVVGVLFAMTGLILVVYLNQPEPQPRERDYSYVGSFFAFALWIGIGIESLWASASKALKSAEVRNRTLSAALL VFAALYLIDGRMVMANYRTHDRSGNYVAWDWAWNILQSCEKDAILFTNGDNDTFPLWYMQEVEGVRTDVRVVNLSLANTG WYLLQLKHDSPRGAKPVELKISDADLKAITYVPVDSVDVAVPAGSEQRKLFSDARRSGVSLPATPSDSLRWRIRPGLSYQ GTTYLRPQDIAVYMIVSDNYGKRPIYFALTVDPTEMIGLERNLRLDGLVYRVVPLRSDSAQDFSDPGTLYGNLFNTYRYR NIGNLSVNIDETSRNLLGNYPPLFGRLALDLSAAPGDSVRVPDKSGVLQTRQRRALAYEVLDRYEKLFPLERYPVSPSFA ATVASLRISEGAKQKAYPYINYLEVLASRSDVREEPELYLLLSQVYRKAGESGKADAVLNHLKQALPALRERLDSLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99428; Mature: 99297
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHNKLNRLIAVLIFVVAEAVYLATMAPTLSFWDCGEVIATSRTLGVPHPPGAPLYLLFG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHH HLFSLLPTFGDIGARINFFSTLLSSATIMLTYLIIVRLITIARNSKPAEWDLPDKIAAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC GAAVGALALAFSDSFWFNAVETSLWAASSFLTATIFWMMLCWYDEDPAPGSERWLLAVMY CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH MIGLSIGVHLLCLLALFSLVLLYYFKKYPVTLKSFSLMGLFSLGLFFLIYRGIIKELPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE LVHTSWWGLGLLITLLVYGVWFSQQKRLVLPNLVLMSVLLLILGYTSYLLIFVRAHAGPP EEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC INENDPSTLQAFFSYVNREQYGSWPLWPRRWSPEPVHQYFYRFYSGDWDYFFRYQLDLMY CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHH LRYFGWQFIGRSAPIEGAVIDWGQLWGVPLLAGLYGAVSHFRRNWKMALVVGVLFAMTGL HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILVVYLNQPEPQPRERDYSYVGSFFAFALWIGIGIESLWASASKALKSAEVRNRTLSAAL HEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFAALYLIDGRMVMANYRTHDRSGNYVAWDWAWNILQSCEKDAILFTNGDNDTFPLWYM HHHHHHHHHCCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEEH QEVEGVRTDVRVVNLSLANTGWYLLQLKHDSPRGAKPVELKISDADLKAITYVPVDSVDV HHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEE AVPAGSEQRKLFSDARRSGVSLPATPSDSLRWRIRPGLSYQGTTYLRPQDIAVYMIVSDN EECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEEEEEECC YGKRPIYFALTVDPTEMIGLERNLRLDGLVYRVVPLRSDSAQDFSDPGTLYGNLFNTYRY CCCCCEEEEEEECHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC RNIGNLSVNIDETSRNLLGNYPPLFGRLALDLSAAPGDSVRVPDKSGVLQTRQRRALAYE CCCCCEEEEECHHHHHHCCCCCCHHHHHEEEEECCCCCCEECCCCCCHHHHHHHHHHHHH VLDRYEKLFPLERYPVSPSFAATVASLRISEGAKQKAYPYINYLEVLASRSDVREEPELY HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHH LLLSQVYRKAGESGKADAVLNHLKQALPALRERLDSLKQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHNKLNRLIAVLIFVVAEAVYLATMAPTLSFWDCGEVIATSRTLGVPHPPGAPLYLLFG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHH HLFSLLPTFGDIGARINFFSTLLSSATIMLTYLIIVRLITIARNSKPAEWDLPDKIAAYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHC GAAVGALALAFSDSFWFNAVETSLWAASSFLTATIFWMMLCWYDEDPAPGSERWLLAVMY CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH MIGLSIGVHLLCLLALFSLVLLYYFKKYPVTLKSFSLMGLFSLGLFFLIYRGIIKELPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE LVHTSWWGLGLLITLLVYGVWFSQQKRLVLPNLVLMSVLLLILGYTSYLLIFVRAHAGPP EEECCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC INENDPSTLQAFFSYVNREQYGSWPLWPRRWSPEPVHQYFYRFYSGDWDYFFRYQLDLMY CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHH LRYFGWQFIGRSAPIEGAVIDWGQLWGVPLLAGLYGAVSHFRRNWKMALVVGVLFAMTGL HHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ILVVYLNQPEPQPRERDYSYVGSFFAFALWIGIGIESLWASASKALKSAEVRNRTLSAAL HEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFAALYLIDGRMVMANYRTHDRSGNYVAWDWAWNILQSCEKDAILFTNGDNDTFPLWYM HHHHHHHHHCCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEEH QEVEGVRTDVRVVNLSLANTGWYLLQLKHDSPRGAKPVELKISDADLKAITYVPVDSVDV HHHHCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCEE AVPAGSEQRKLFSDARRSGVSLPATPSDSLRWRIRPGLSYQGTTYLRPQDIAVYMIVSDN EECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCEEEEEEEECC YGKRPIYFALTVDPTEMIGLERNLRLDGLVYRVVPLRSDSAQDFSDPGTLYGNLFNTYRY CCCCCEEEEEEECHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHC RNIGNLSVNIDETSRNLLGNYPPLFGRLALDLSAAPGDSVRVPDKSGVLQTRQRRALAYE CCCCCEEEEECHHHHHHCCCCCCHHHHHEEEEECCCCCCEECCCCCCHHHHHHHHHHHHH VLDRYEKLFPLERYPVSPSFAATVASLRISEGAKQKAYPYINYLEVLASRSDVREEPELY HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHH LLLSQVYRKAGESGKADAVLNHLKQALPALRERLDSLKQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA