| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is engB
Identifier: 193211890
GI number: 193211890
Start: 216277
End: 216855
Strand: Direct
Name: engB
Synonym: Cpar_0216
Alternate gene names: 193211890
Gene position: 216277-216855 (Clockwise)
Preceding gene: 193211889
Following gene: 193211891
Centisome position: 9.45
GC content: 54.58
Gene sequence:
>579_bases ATGAATATCACCAGCGCTGATTTTTTCTGTAGTTATTCGAGCTTGAACGGCCTCCCGTCAGACGGTCGTCCGGAGATTGT TTTTGTGGGGCGGTCGAATGTGGGGAAGTCTTCGCTGCTGAATTCTCTTTGCGCCCGCAAGGGGCTGGCGAAGACCAGTT CGACGCCGGGGAAGACTCGCCTTATCAACTATTTCCTTATCAACGAGAACCTCTACTTCGTCGATCTGCCGGGGTATGGG TATGCCAAGGTCGGGCACGGCGAGCGGGAGAGCTGGGGGAAGTTGCTGACGGATTATGTGGTCAAGCGGGACGAAATCGC CCTTGTGGTTTTGCTCGTCGATGCGCGGCATCCGGGGATGGGCTCCGATCGGGAAATGATGGAGTTTCTCGACTATTGTG GTCGTCCGTTCGGCATCGTGCTCACCAAGTGGGACAAGCTCAAACAGGCCGAAAAGTCCAAGGCCCGGCGTACGATTGAA AGTTGTGCATCGAATGCCAGATTTATTGTAAATTACTCGTCTTTGTCGGGCGCGGGCCGGGACAAGCTTCTGGAGCGCCT CGATCTTTTTTCTCAGTAA
Upstream 100 bases:
>100_bases CCTGCATCTACTATTTAGCTTCCCTCTTTGGCAATCACCATAAAGCACAGGTCATTCCGCCCGGAATTCGCCTGCGCATT CTCACCTTTCACCCGCGTCC
Downstream 100 bases:
>100_bases AAGCAAGCGACGTGGAAGAACGAACATTCAGCAGGCCGGCGGCGTCTGCAACTGTCCTGGTCGGTACGCAGTTCGGCGAC GAGGGCAAGGGCAAGCTGGT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFLINENLYFVDLPGYG YAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMGSDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIE SCASNARFIVNYSSLSGAGRDKLLERLDLFSQ
Sequences:
>Translated_192_residues MNITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFLINENLYFVDLPGYG YAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMGSDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIE SCASNARFIVNYSSLSGAGRDKLLERLDLFSQ >Mature_192_residues MNITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFLINENLYFVDLPGYG YAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMGSDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIE SCASNARFIVNYSSLSGAGRDKLLERLDLFSQ
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=142, Percent_Identity=33.8028169014084, Blast_Score=82, Evalue=3e-16, Organism=Escherichia coli, GI145693205, Length=194, Percent_Identity=38.1443298969072, Blast_Score=134, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6320543, Length=142, Percent_Identity=30.9859154929577, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_CHLP8 (B3QQY9)
Other databases:
- EMBL: CP001099 - RefSeq: YP_001997843.1 - GeneID: 6419124 - GenomeReviews: CP001099_GR - KEGG: cpc:Cpar_0216 - HOGENOM: HBG447097 - OMA: FIVNYSS - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - InterPro: IPR005225 - TIGRFAMs: TIGR03598 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 21407; Mature: 21407
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTR CCCCCCHHEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCE LINYFLINENLYFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGM EEEEEEEECCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC GSDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIESCASNARFIVNYSSLSGAGR CCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCH DKLLERLDLFSQ HHHHHHHHHHCC >Mature Secondary Structure MNITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTR CCCCCCHHEEEHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCE LINYFLINENLYFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGM EEEEEEEECCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCC GSDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIESCASNARFIVNYSSLSGAGR CCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCH DKLLERLDLFSQ HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA