| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211837
Identifier: 193211837
GI number: 193211837
Start: 175157
End: 177535
Strand: Direct
Name: 193211837
Synonym: Cpar_0163
Alternate gene names: NA
Gene position: 175157-177535 (Clockwise)
Preceding gene: 193211836
Following gene: 193211838
Centisome position: 7.65
GC content: 61.41
Gene sequence:
>2379_bases GTGAAGCACGCTGCCTGGCCGTACCTGATTGCCATTCTCCTTTTTGCCCTTATGCTGGCGCTGCCTTTCGGCCCGATTCT GAGCCTGCATCTCGTGCCGGGCTCGCCGGACAGCGTCACACCGATGGCGCTCGGCAAGGCGCTCGAGGCGCTTCAGGTTC AATCCGGCCACTATCCGCTCTGGCAGCCCTGGACCTTTTCAGGAATGCCGACCGTAGCGGCGTTCAGTTATCTGAGCGGA CTTTATCTCCCGAACCTCGTGTTCGGTGCGCTGCACATCGATCCGATGTACATCCAGCTTTTGCACCTTGTGTTTGCTGG CATGGGTGGCTTCGTGCTTGCGCGGCAGCTCGGGCTGGGCAGCACTGCGGCTTTTTTTGCCGGGTCGGCCTTCATGCTCA ATCCCTACATGACCGCCATGCTCGCCTATGGGCACGGCAGCCAGCTCATGACGGCGGCGTACATGCCGTGGGTGCTCTGG GCGGCGATCCGCCTTTCCGAGCGGGGCAGCCTTGCTGATGCGGGTTTGCTGGCGCTCCTGGTCGGTTTGCAGCTCCAGCG CGCACATGTGCAGATCGCCTGGTACACCTGGATGCTTGTTGTGCCATTGCTCGCTGTGAAGATTCTGGTTGACAAAAATG CGGGTGGATCGAAAATCAAAACCGGCGGATTCGCGCTCGCGGCTTTGGTGCTTGGCGTGGCGGTGGCGTTGCAGGTCTAT CTGCCCGCGCTCGGCTATCTGCCCTTTTCGGCGCGCGGCGCTGCGGGTGATGCTGCCGATGCGTATCGTTACGCGACGAT GTGGTCGATGCACCCCGCCGAATTGCTCACCTACCTGTTGCCGGGCGCTTACGGCTTCGGCGGTGTCACCTACTGGGGCT TCATGCCCTTCACCGATTTTCCGCACTACGCGGGCCTCATCGTCCTCGGATTTGCGGTTGGCGGTGCGGTTGCCGGGCGC AAAAAGCCCGTCGTGCTCTTTTTTATCGCCATGACGGTGCTGGCTCTGCTGCTTTCGTTCGGCAATTTCTTCAGTCCGGT GTATGATCTCTTCTATCGTTTCGCGCCCAAGTTCAGCTCCTTCCGAGTGCCGTCGATGGTGCTGATTGTCGTAGCGCTCT GTCTCGCGATGCTCTCCGGATTCGGCTTGCAGGCGTGGCTCGACAAGCCGCTTGGCGACTCCTCCCGCTTCCTGAAATGG GCTGGCATTGCCGTAGGGGTAATGGCGATTCTGTTCCTGTCGCTTGAGAGTGGTCTGGAGCAGCTGCTTCGGGCATCGTT CCCGCCCGTGCGCATCGACAACTTCAGCCTGGTTTCGATGGTGGGCGACCTCCGCTGGGAGCTGTTCAGGAGCAGCCTGT TCATGCTTATCCTTGTTTTTGCCGGTGTGCTTGGTCTGTTGTGGCTGGTTGCAAAAGGGATGATCAATGCGCGGCAGGCT GCGCTGGTGCTGGTGACGGTTTCCTCCATCGATTTGCTCTGGATGGATCACAAGATCGTTTCGCCTGCGGACAACTCCCT CCGCATGTCGCCGCTGGTGGAGCGCGCCTCGCTCGATGTAGCGCTCGAAGAGGACGAAGTCACGCGTTTTCTGTCGAGCC GCGAGGGGCTGTTCAGAATCTATCCGGTCGGACGCCTTTTCTCGGAGAACAAGTTCAGTGTCGCGGGAATCGAATCGACC GGCGGCTACCATGCCGCCAAGCTCGGCGTTTATCAGGAACTGCTCAGCCGCACGGAGAATCTGGCCAATCTCGATGTGCT TCGGATGCTCAACGTCAGGTATGTGGTGTCGCCGCAGCCTTTGCACGCCGAAGAGCTGAAGCCGGTGGCGTCGGGCGCGC TGTCGCTGGTGTCGGGCCAGGTGCCGGTGGCGGTCTATGAGCTGTCCGGAGCGATGCCGCGCGCGTGGTTCGCACCGCAG GCCGATGCTGTGCAGAGCGAAGCCGCGGCAGTGGAGGCGGTCATGCAGGGAGGGGGAAGCGATGGCGGTGTCTTTGTCGA AGCTGCGCCCTGGCAGGGAGTGAAGCGTTTTGCGCCGGGCGAAGTGCTCTCCATGCAGCGCAGTGCCGAGTCGATCACGA TGAAGGTTCGCGCGGACGGCGAGGCGTTGCTGGTGCTCAGCGAGGTTTGGTATCCGCAGGGCTGGAAGCTCACCGTCGAT GGCCGCGCGCAGCAGGCGCTCAAGGTTGACGGCGTGATTCGCGGCGTCATCGTGCCGCCCGGCGAGCATGAAGTGCGCTT CGTCTATGATCGCAGCCGCTTCGAGACCGGCCGGATGGTTTCGACTGTCGCCACACTGCTTTCGCTCGGGCTCATCGTGG CCGGTAGCGTGCTTGGCCGAGGTTCATCAAAATCATCAAATTTAGCCAGCAAATCGTGA
Upstream 100 bases:
>100_bases ATGTGTTGCTCATCCGTGCGTTCCGGTTGGAACAGGAGGAGCTGGAGGTTATTTTCAAATTCATGCCTTTTCTGAACACT CAAAGCAAGAACGAAAACCC
Downstream 100 bases:
>100_bases GAAAAGCGCTGTTTCTGACCCGGAATTTTCCGCCTTACGTCACCTGTGGTTCGTCGCGGGCCTGGAAGTTTGCTTCCAAC CTCTCCACCATCGGCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MKHAAWPYLIAILLFALMLALPFGPILSLHLVPGSPDSVTPMALGKALEALQVQSGHYPLWQPWTFSGMPTVAAFSYLSG LYLPNLVFGALHIDPMYIQLLHLVFAGMGGFVLARQLGLGSTAAFFAGSAFMLNPYMTAMLAYGHGSQLMTAAYMPWVLW AAIRLSERGSLADAGLLALLVGLQLQRAHVQIAWYTWMLVVPLLAVKILVDKNAGGSKIKTGGFALAALVLGVAVALQVY LPALGYLPFSARGAAGDAADAYRYATMWSMHPAELLTYLLPGAYGFGGVTYWGFMPFTDFPHYAGLIVLGFAVGGAVAGR KKPVVLFFIAMTVLALLLSFGNFFSPVYDLFYRFAPKFSSFRVPSMVLIVVALCLAMLSGFGLQAWLDKPLGDSSRFLKW AGIAVGVMAILFLSLESGLEQLLRASFPPVRIDNFSLVSMVGDLRWELFRSSLFMLILVFAGVLGLLWLVAKGMINARQA ALVLVTVSSIDLLWMDHKIVSPADNSLRMSPLVERASLDVALEEDEVTRFLSSREGLFRIYPVGRLFSENKFSVAGIEST GGYHAAKLGVYQELLSRTENLANLDVLRMLNVRYVVSPQPLHAEELKPVASGALSLVSGQVPVAVYELSGAMPRAWFAPQ ADAVQSEAAAVEAVMQGGGSDGGVFVEAAPWQGVKRFAPGEVLSMQRSAESITMKVRADGEALLVLSEVWYPQGWKLTVD GRAQQALKVDGVIRGVIVPPGEHEVRFVYDRSRFETGRMVSTVATLLSLGLIVAGSVLGRGSSKSSNLASKS
Sequences:
>Translated_792_residues MKHAAWPYLIAILLFALMLALPFGPILSLHLVPGSPDSVTPMALGKALEALQVQSGHYPLWQPWTFSGMPTVAAFSYLSG LYLPNLVFGALHIDPMYIQLLHLVFAGMGGFVLARQLGLGSTAAFFAGSAFMLNPYMTAMLAYGHGSQLMTAAYMPWVLW AAIRLSERGSLADAGLLALLVGLQLQRAHVQIAWYTWMLVVPLLAVKILVDKNAGGSKIKTGGFALAALVLGVAVALQVY LPALGYLPFSARGAAGDAADAYRYATMWSMHPAELLTYLLPGAYGFGGVTYWGFMPFTDFPHYAGLIVLGFAVGGAVAGR KKPVVLFFIAMTVLALLLSFGNFFSPVYDLFYRFAPKFSSFRVPSMVLIVVALCLAMLSGFGLQAWLDKPLGDSSRFLKW AGIAVGVMAILFLSLESGLEQLLRASFPPVRIDNFSLVSMVGDLRWELFRSSLFMLILVFAGVLGLLWLVAKGMINARQA ALVLVTVSSIDLLWMDHKIVSPADNSLRMSPLVERASLDVALEEDEVTRFLSSREGLFRIYPVGRLFSENKFSVAGIEST GGYHAAKLGVYQELLSRTENLANLDVLRMLNVRYVVSPQPLHAEELKPVASGALSLVSGQVPVAVYELSGAMPRAWFAPQ ADAVQSEAAAVEAVMQGGGSDGGVFVEAAPWQGVKRFAPGEVLSMQRSAESITMKVRADGEALLVLSEVWYPQGWKLTVD GRAQQALKVDGVIRGVIVPPGEHEVRFVYDRSRFETGRMVSTVATLLSLGLIVAGSVLGRGSSKSSNLASKS >Mature_792_residues MKHAAWPYLIAILLFALMLALPFGPILSLHLVPGSPDSVTPMALGKALEALQVQSGHYPLWQPWTFSGMPTVAAFSYLSG LYLPNLVFGALHIDPMYIQLLHLVFAGMGGFVLARQLGLGSTAAFFAGSAFMLNPYMTAMLAYGHGSQLMTAAYMPWVLW AAIRLSERGSLADAGLLALLVGLQLQRAHVQIAWYTWMLVVPLLAVKILVDKNAGGSKIKTGGFALAALVLGVAVALQVY LPALGYLPFSARGAAGDAADAYRYATMWSMHPAELLTYLLPGAYGFGGVTYWGFMPFTDFPHYAGLIVLGFAVGGAVAGR KKPVVLFFIAMTVLALLLSFGNFFSPVYDLFYRFAPKFSSFRVPSMVLIVVALCLAMLSGFGLQAWLDKPLGDSSRFLKW AGIAVGVMAILFLSLESGLEQLLRASFPPVRIDNFSLVSMVGDLRWELFRSSLFMLILVFAGVLGLLWLVAKGMINARQA ALVLVTVSSIDLLWMDHKIVSPADNSLRMSPLVERASLDVALEEDEVTRFLSSREGLFRIYPVGRLFSENKFSVAGIEST GGYHAAKLGVYQELLSRTENLANLDVLRMLNVRYVVSPQPLHAEELKPVASGALSLVSGQVPVAVYELSGAMPRAWFAPQ ADAVQSEAAAVEAVMQGGGSDGGVFVEAAPWQGVKRFAPGEVLSMQRSAESITMKVRADGEALLVLSEVWYPQGWKLTVD GRAQQALKVDGVIRGVIVPPGEHEVRFVYDRSRFETGRMVSTVATLLSLGLIVAGSVLGRGSSKSSNLASKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85452; Mature: 85452
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAAWPYLIAILLFALMLALPFGPILSLHLVPGSPDSVTPMALGKALEALQVQSGHYPL CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC WQPWTFSGMPTVAAFSYLSGLYLPNLVFGALHIDPMYIQLLHLVFAGMGGFVLARQLGLG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCC STAAFFAGSAFMLNPYMTAMLAYGHGSQLMTAAYMPWVLWAAIRLSERGSLADAGLLALL CHHHHHCCCHHEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VGLQLQRAHVQIAWYTWMLVVPLLAVKILVDKNAGGSKIKTGGFALAALVLGVAVALQVY HHHHHHHHHEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH LPALGYLPFSARGAAGDAADAYRYATMWSMHPAELLTYLLPGAYGFGGVTYWGFMPFTDF HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHCCCCCCCCC PHYAGLIVLGFAVGGAVAGRKKPVVLFFIAMTVLALLLSFGNFFSPVYDLFYRFAPKFSS CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FRVPSMVLIVVALCLAMLSGFGLQAWLDKPLGDSSRFLKWAGIAVGVMAILFLSLESGLE CCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLLRASFPPVRIDNFSLVSMVGDLRWELFRSSLFMLILVFAGVLGLLWLVAKGMINARQA HHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALVLVTVSSIDLLWMDHKIVSPADNSLRMSPLVERASLDVALEEDEVTRFLSSREGLFRI EEEEEEECCEEEEEECCEEECCCCCCEEHHHHHHHHCCCEEECHHHHHHHHHCCCCEEEE YPVGRLFSENKFSVAGIESTGGYHAAKLGVYQELLSRTENLANLDVLRMLNVRYVVSPQP EECHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCCC LHAEELKPVASGALSLVSGQVPVAVYELSGAMPRAWFAPQADAVQSEAAAVEAVMQGGGS CCHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC DGGVFVEAAPWQGVKRFAPGEVLSMQRSAESITMKVRADGEALLVLSEVWYPQGWKLTVD CCCEEEEECCCCCHHHCCCCHHHHHHHCCCEEEEEEEECCCEEEEEEHHCCCCCCEEEEC GRAQQALKVDGVIRGVIVPPGEHEVRFVYDRSRFETGRMVSTVATLLSLGLIVAGSVLGR CCCHHHHHHCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GSSKSSNLASKS CCCCCCCCCCCC >Mature Secondary Structure MKHAAWPYLIAILLFALMLALPFGPILSLHLVPGSPDSVTPMALGKALEALQVQSGHYPL CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC WQPWTFSGMPTVAAFSYLSGLYLPNLVFGALHIDPMYIQLLHLVFAGMGGFVLARQLGLG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCC STAAFFAGSAFMLNPYMTAMLAYGHGSQLMTAAYMPWVLWAAIRLSERGSLADAGLLALL CHHHHHCCCHHEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VGLQLQRAHVQIAWYTWMLVVPLLAVKILVDKNAGGSKIKTGGFALAALVLGVAVALQVY HHHHHHHHHEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH LPALGYLPFSARGAAGDAADAYRYATMWSMHPAELLTYLLPGAYGFGGVTYWGFMPFTDF HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHCCCCCCCCC PHYAGLIVLGFAVGGAVAGRKKPVVLFFIAMTVLALLLSFGNFFSPVYDLFYRFAPKFSS CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FRVPSMVLIVVALCLAMLSGFGLQAWLDKPLGDSSRFLKWAGIAVGVMAILFLSLESGLE CCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLLRASFPPVRIDNFSLVSMVGDLRWELFRSSLFMLILVFAGVLGLLWLVAKGMINARQA HHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ALVLVTVSSIDLLWMDHKIVSPADNSLRMSPLVERASLDVALEEDEVTRFLSSREGLFRI EEEEEEECCEEEEEECCEEECCCCCCEEHHHHHHHHCCCEEECHHHHHHHHHCCCCEEEE YPVGRLFSENKFSVAGIESTGGYHAAKLGVYQELLSRTENLANLDVLRMLNVRYVVSPQP EECHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCCC LHAEELKPVASGALSLVSGQVPVAVYELSGAMPRAWFAPQADAVQSEAAAVEAVMQGGGS CCHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC DGGVFVEAAPWQGVKRFAPGEVLSMQRSAESITMKVRADGEALLVLSEVWYPQGWKLTVD CCCEEEEECCCCCHHHCCCCHHHHHHHCCCEEEEEEEECCCEEEEEEHHCCCCCCEEEEC GRAQQALKVDGVIRGVIVPPGEHEVRFVYDRSRFETGRMVSTVATLLSLGLIVAGSVLGR CCCHHHHHHCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GSSKSSNLASKS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA