| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is crcB [H]
Identifier: 193211817
GI number: 193211817
Start: 158901
End: 159275
Strand: Direct
Name: crcB [H]
Synonym: Cpar_0142
Alternate gene names: 193211817
Gene position: 158901-159275 (Clockwise)
Preceding gene: 193211816
Following gene: 193211818
Centisome position: 6.94
GC content: 60.27
Gene sequence:
>375_bases ATGAAAAATGTCTTGCTGGTTGGTGCGGGAGGATTTGCCGGGTCGGTGGCGCGCTACCTCGTGGCGCTCGCCGTGCCGTT TTCGGGTACGGGATTTCCCTTTGCAACCTTTGCGGTCAATCTGCTCGGTTCGTTCCTGATCGGCTTCATCAGCGAACTGG CGCTTTCGACCACGCTGCTCTCGCCCGAAGCCCGCCTGCTTCTGACGACCGGCTTCTGCGGGGGCTTCACCACCTTTTCG ACCGCCATGTACGAAACCGGCGGCCTCATGCGCGACGGCGAGGCGCTTTACGCCAGCCTGTACGTTGCGGGTAGTCTCGT CGGTGGCCTTGCCTGTCTTTTTTCCGGAACCCTTCTTGCAAAACTCTGGCAATGA
Upstream 100 bases:
>100_bases AACATCCACGACGAGATGTGCTGCGCCCACAAGCGCATCGAGGGTCGGCAGACCGGCAATGACGACGGCAATTGCTGTAG CCGCTGATGGAGCCGGAGCG
Downstream 100 bases:
>100_bases TGAACTTCATCGAATCGGAACTTCTGCGGATCTTCGTCGGTGAGCAGGAAAAGCTGCACCACCGCCCGCTCTACGAACTC CTCGTCAGCGAAGCCCTCGA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKNVLLVGAGGFAGSVARYLVALAVPFSGTGFPFATFAVNLLGSFLIGFISELALSTTLLSPEARLLLTTGFCGGFTTFS TAMYETGGLMRDGEALYASLYVAGSLVGGLACLFSGTLLAKLWQ
Sequences:
>Translated_124_residues MKNVLLVGAGGFAGSVARYLVALAVPFSGTGFPFATFAVNLLGSFLIGFISELALSTTLLSPEARLLLTTGFCGGFTTFS TAMYETGGLMRDGEALYASLYVAGSLVGGLACLFSGTLLAKLWQ >Mature_124_residues MKNVLLVGAGGFAGSVARYLVALAVPFSGTGFPFATFAVNLLGSFLIGFISELALSTTLLSPEARLLLTTGFCGGFTTFS TAMYETGGLMRDGEALYASLYVAGSLVGGLACLFSGTLLAKLWQ
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=111, Percent_Identity=37.8378378378378, Blast_Score=63, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 12778; Mature: 12778
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVLLVGAGGFAGSVARYLVALAVPFSGTGFPFATFAVNLLGSFLIGFISELALSTTLL CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPEARLLLTTGFCGGFTTFSTAMYETGGLMRDGEALYASLYVAGSLVGGLACLFSGTLLA CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLWQ HHCC >Mature Secondary Structure MKNVLLVGAGGFAGSVARYLVALAVPFSGTGFPFATFAVNLLGSFLIGFISELALSTTLL CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPEARLLLTTGFCGGFTTFSTAMYETGGLMRDGEALYASLYVAGSLVGGLACLFSGTLLA CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KLWQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]