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The map label for this gene is ssb2 [H]

Identifier: 193211785

GI number: 193211785

Start: 130180

End: 130653

Strand: Direct

Name: ssb2 [H]

Synonym: Cpar_0110

Alternate gene names: 193211785

Gene position: 130180-130653 (Clockwise)

Preceding gene: 193211784

Following gene: 193211786

Centisome position: 5.69

GC content: 52.11

Gene sequence:

>474_bases
ATGGCGGAACTGAAAATGCCTGAAATCAACAGCGTCATTATTGCCGGCAACCTTACCAAAGACCCGGTCTTCAGACAGAC
CAATTCAGGTGGAACGCCAGTTGTGAATTTTTCCATTGCGTGCAATCGCCGTTTCAGGGACAGCAACCATCAGTGGCAGG
AAGATGTCTGCTACGTCGGTGTCGTCGCCTGGAACAAGCTCGCTGAAAGCTGCCGTGACAACCTGAGAAAAAGCTCGGCT
GTCCTGGTTGACGGAGAGTTGCAGAGCCGCACCTGGAAAGCCCAGGATGGTACATCGAGAACCGTGGTCGAAATCAAGGC
ACGGAGGATCCAGTTCCTCAACAAAAGGAAGAAGAGCGACGAGGGAGACTACGACGACGAAGGCTTCATCGAAGATGATG
CGCATGAAACGCATCACAGGCATGTGGACGACGAAGGACACATGTATGAGTACAAATACCTCACTTCCGACTGA

Upstream 100 bases:

>100_bases
TGAATCCGAATCGACAGCCAAAAGCTGACCGCAGATCGATGACGGTTTTTGAATGAATGATGATTACGATACCATTTGAG
AACAAAAAGGAGAAGATGCT

Downstream 100 bases:

>100_bases
GACAAGTCGCGCTTCGATGCCGTAAGGCTGCAACGAAGCACGTGATCATGCAAGTTAAATTCTGAACAAGATCAATGAGA
CAGAAACCACATAAGGCAAA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2 [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAELKMPEINSVIIAGNLTKDPVFRQTNSGGTPVVNFSIACNRRFRDSNHQWQEDVCYVGVVAWNKLAESCRDNLRKSSA
VLVDGELQSRTWKAQDGTSRTVVEIKARRIQFLNKRKKSDEGDYDDEGFIEDDAHETHHRHVDDEGHMYEYKYLTSD

Sequences:

>Translated_157_residues
MAELKMPEINSVIIAGNLTKDPVFRQTNSGGTPVVNFSIACNRRFRDSNHQWQEDVCYVGVVAWNKLAESCRDNLRKSSA
VLVDGELQSRTWKAQDGTSRTVVEIKARRIQFLNKRKKSDEGDYDDEGFIEDDAHETHHRHVDDEGHMYEYKYLTSD
>Mature_156_residues
AELKMPEINSVIIAGNLTKDPVFRQTNSGGTPVVNFSIACNRRFRDSNHQWQEDVCYVGVVAWNKLAESCRDNLRKSSAV
LVDGELQSRTWKAQDGTSRTVVEIKARRIQFLNKRKKSDEGDYDDEGFIEDDAHETHHRHVDDEGHMYEYKYLTSD

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=113, Percent_Identity=34.5132743362832, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18079; Mature: 17948

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELKMPEINSVIIAGNLTKDPVFRQTNSGGTPVVNFSIACNRRFRDSNHQWQEDVCYVG
CCCCCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEH
VVAWNKLAESCRDNLRKSSAVLVDGELQSRTWKAQDGTSRTVVEIKARRIQFLNKRKKSD
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCCCCCEEHEEHHHHHHHHHHHHCCCC
EGDYDDEGFIEDDAHETHHRHVDDEGHMYEYKYLTSD
CCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
AELKMPEINSVIIAGNLTKDPVFRQTNSGGTPVVNFSIACNRRFRDSNHQWQEDVCYVG
CCCCCCCCCEEEEECCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEH
VVAWNKLAESCRDNLRKSSAVLVDGELQSRTWKAQDGTSRTVVEIKARRIQFLNKRKKSD
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCCCCCEEHEEHHHHHHHHHHHHCCCC
EGDYDDEGFIEDDAHETHHRHVDDEGHMYEYKYLTSD
CCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]