| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211781
Identifier: 193211781
GI number: 193211781
Start: 127219
End: 127743
Strand: Direct
Name: 193211781
Synonym: Cpar_0106
Alternate gene names: NA
Gene position: 127219-127743 (Clockwise)
Preceding gene: 193211779
Following gene: 193211782
Centisome position: 5.56
GC content: 61.33
Gene sequence:
>525_bases ATGAAACCACTCAAAGAGGTTGCCGGGGCGTATCTGGCGCTTTCGGAGGCGCAGCGGCAGTTGGTCGCAGGCGCGTATGA CGAAGCAGCGTCCAACTGCCGCAAGGCGATGGAGATTTCGCATACGATGCCACCTGAAGAGGCGTTCGATCACGCCGGGT TCGATGCGTTCTGCCATGCCGGGCTGGCCGAGGCGCTGGCAGGGCTTGGCTCGTTCGGCGAAGCGCTCGAATCCGCCGAC AAAGCGTTGCACCACTTCAATCGCCGCGGGGAGTTGAATCAGGACGAAGGCAAACTCTGGATTTCGGCGGTCTATAGCCG CGCGCTGGCGCTCGACGGCCTCGGACGGGGCTCAGAGGCGCTTCCGGAGTTCAAGAAGGTGGTCGAGATGATCGAAGAGC GCAAGGGCGAAACCCCCGGTAAGGAGCGGATGAAAGAGGTCGCCTCTGAACGCATCACCAAAATCGGCGCGTCGAATCAG CACAAAAAGCCGGGCTACAAAGCCTGGTGGGAGTTCTGGTCGTGA
Upstream 100 bases:
>100_bases AGAGAATCGTTAAAGAAACTTCAGGCAATCTTCAGTAGGGATTTAACTCCTTCCTTTCGTTCTATGATTTGCCATACTGT TTTCATTTTTTTATCTGCTT
Downstream 100 bases:
>100_bases CCGAACCCGGCGCGATCCGGCGTGTGCTCGTTGTGCGGCTCAGCGCCATCGGTGACATCGTGCTGACGACGCCCGTCCTG TCCGAGCTGCATCGTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKPLKEVAGAYLALSEAQRQLVAGAYDEAASNCRKAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLGSFGEALESAD KALHHFNRRGELNQDEGKLWISAVYSRALALDGLGRGSEALPEFKKVVEMIEERKGETPGKERMKEVASERITKIGASNQ HKKPGYKAWWEFWS
Sequences:
>Translated_174_residues MKPLKEVAGAYLALSEAQRQLVAGAYDEAASNCRKAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLGSFGEALESAD KALHHFNRRGELNQDEGKLWISAVYSRALALDGLGRGSEALPEFKKVVEMIEERKGETPGKERMKEVASERITKIGASNQ HKKPGYKAWWEFWS >Mature_174_residues MKPLKEVAGAYLALSEAQRQLVAGAYDEAASNCRKAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLGSFGEALESAD KALHHFNRRGELNQDEGKLWISAVYSRALALDGLGRGSEALPEFKKVVEMIEERKGETPGKERMKEVASERITKIGASNQ HKKPGYKAWWEFWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19165; Mature: 19165
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLKEVAGAYLALSEAQRQLVAGAYDEAASNCRKAMEISHTMPPEEAFDHAGFDAFCHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH GLAEALAGLGSFGEALESADKALHHFNRRGELNQDEGKLWISAVYSRALALDGLGRGSEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH LPEFKKVVEMIEERKGETPGKERMKEVASERITKIGASNQHKKPGYKAWWEFWS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MKPLKEVAGAYLALSEAQRQLVAGAYDEAASNCRKAMEISHTMPPEEAFDHAGFDAFCHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHH GLAEALAGLGSFGEALESADKALHHFNRRGELNQDEGKLWISAVYSRALALDGLGRGSEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH LPEFKKVVEMIEERKGETPGKERMKEVASERITKIGASNQHKKPGYKAWWEFWS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA