Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192291580

Identifier: 192291580

GI number: 192291580

Start: 3454736

End: 3455032

Strand: Reverse

Name: 192291580

Synonym: Rpal_3207

Alternate gene names: NA

Gene position: 3455032-3454736 (Counterclockwise)

Preceding gene: 192291581

Following gene: 192291579

Centisome position: 60.15

GC content: 66.33

Gene sequence:

>297_bases
ATGACCGGACCCAAGCAACAGCCGCTGCCGCCCGACGTCGAAGGCCGCGAAGACGCGATCGAGGTGCTGCGCGCCTTCGT
GCTCGACGGCGGTCTGTCGATCGCCTTCATGCGTGCGTTTGAAGATCCGGAGATGTGGGGGCTGTTGCTCGTCGACATCG
CCCGCCACGCCGCGCGCTCCTATGCGCGCGAGAGCGAATACACCGAAGACGAAGCGCTCGAACGCATCGTCGAGATGTTC
GAGGCCGAGCTGTCGCGCCCGACCGACACCGGCGCCACCACCGAACGGACGCAGTAA

Upstream 100 bases:

>100_bases
CCGTAAAGGCTCTGCAAGAGCAGAACAGAAGGGCATAGATGGACCGGAATGTTTTGATCTTTTTGTTCTTAAGGCAAAGA
ATGAAGTTACAGGTAAGCCT

Downstream 100 bases:

>100_bases
GGTTCTGTCCTCATGCCGATCAACATTCTGATGCCCGCGCTGTCGCCGACCATGGAGAAGGGCAACCTTGCGAAGTGGCT
GAAGAAGGAGGGCGACAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARSYARESEYTEDEALERIVEMF
EAELSRPTDTGATTERTQ

Sequences:

>Translated_98_residues
MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARSYARESEYTEDEALERIVEMF
EAELSRPTDTGATTERTQ
>Mature_97_residues
TGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARSYARESEYTEDEALERIVEMFE
AELSRPTDTGATTERTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11042; Mature: 10911

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YARESEYTEDEALERIVEMFEAELSRPTDTGATTERTQ
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YARESEYTEDEALERIVEMFEAELSRPTDTGATTERTQ
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA