| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291580
Identifier: 192291580
GI number: 192291580
Start: 3454736
End: 3455032
Strand: Reverse
Name: 192291580
Synonym: Rpal_3207
Alternate gene names: NA
Gene position: 3455032-3454736 (Counterclockwise)
Preceding gene: 192291581
Following gene: 192291579
Centisome position: 60.15
GC content: 66.33
Gene sequence:
>297_bases ATGACCGGACCCAAGCAACAGCCGCTGCCGCCCGACGTCGAAGGCCGCGAAGACGCGATCGAGGTGCTGCGCGCCTTCGT GCTCGACGGCGGTCTGTCGATCGCCTTCATGCGTGCGTTTGAAGATCCGGAGATGTGGGGGCTGTTGCTCGTCGACATCG CCCGCCACGCCGCGCGCTCCTATGCGCGCGAGAGCGAATACACCGAAGACGAAGCGCTCGAACGCATCGTCGAGATGTTC GAGGCCGAGCTGTCGCGCCCGACCGACACCGGCGCCACCACCGAACGGACGCAGTAA
Upstream 100 bases:
>100_bases CCGTAAAGGCTCTGCAAGAGCAGAACAGAAGGGCATAGATGGACCGGAATGTTTTGATCTTTTTGTTCTTAAGGCAAAGA ATGAAGTTACAGGTAAGCCT
Downstream 100 bases:
>100_bases GGTTCTGTCCTCATGCCGATCAACATTCTGATGCCCGCGCTGTCGCCGACCATGGAGAAGGGCAACCTTGCGAAGTGGCT GAAGAAGGAGGGCGACAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARSYARESEYTEDEALERIVEMF EAELSRPTDTGATTERTQ
Sequences:
>Translated_98_residues MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARSYARESEYTEDEALERIVEMF EAELSRPTDTGATTERTQ >Mature_97_residues TGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARSYARESEYTEDEALERIVEMFE AELSRPTDTGATTERTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11042; Mature: 10911
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARS CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH YARESEYTEDEALERIVEMFEAELSRPTDTGATTERTQ HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFMRAFEDPEMWGLLLVDIARHAARS CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH YARESEYTEDEALERIVEMFEAELSRPTDTGATTERTQ HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA