Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192291416

Identifier: 192291416

GI number: 192291416

Start: 3294504

End: 3294725

Strand: Reverse

Name: 192291416

Synonym: Rpal_3040

Alternate gene names: NA

Gene position: 3294725-3294504 (Counterclockwise)

Preceding gene: 192291417

Following gene: 192291415

Centisome position: 57.36

GC content: 60.36

Gene sequence:

>222_bases
GTGAAAAGCAACGTCATCCCCTTCAAGAACCCGCACGGGCGCACGATGCCGACGGCCGATCCTGCGATGAACCGCGCGAA
GGCGTTCGCTAATTACTACGGGGACGAGCGGCGCCGCGGCGTTGATCCCGAGACCGCCCACCGAAACGCAAGCAAGCTCA
TCATGGCCGATTTTGACCGGCTGATTGCGACTTTACGCACCACCATGAACGACGTGAGGTAA

Upstream 100 bases:

>100_bases
TGAAACGAGCTGGACTAATCGCCCTCACTATCTCCGGCGTTGCGCTCTGGCTTTGGCTCGCCATCCCGGCAATCGCAGGA
CTGTTCGGGGTGACGTCGTG

Downstream 100 bases:

>100_bases
TCGCCATGAACCTGCAGAACAGCACAGAACTGCGCGCGGCCTATGAGCGTATCGCCGAGCTTGAGAGCGTTTTGACGCTG
ATCCGCGATGGCCTCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MKSNVIPFKNPHGRTMPTADPAMNRAKAFANYYGDERRRGVDPETAHRNASKLIMADFDRLIATLRTTMNDVR

Sequences:

>Translated_73_residues
MKSNVIPFKNPHGRTMPTADPAMNRAKAFANYYGDERRRGVDPETAHRNASKLIMADFDRLIATLRTTMNDVR
>Mature_73_residues
MKSNVIPFKNPHGRTMPTADPAMNRAKAFANYYGDERRRGVDPETAHRNASKLIMADFDRLIATLRTTMNDVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8322; Mature: 8322

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNVIPFKNPHGRTMPTADPAMNRAKAFANYYGDERRRGVDPETAHRNASKLIMADFDR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHCCHHHHHHHHHHH
LIATLRTTMNDVR
HHHHHHHHHHHCC
>Mature Secondary Structure
MKSNVIPFKNPHGRTMPTADPAMNRAKAFANYYGDERRRGVDPETAHRNASKLIMADFDR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHCCHHHHHHHHHHH
LIATLRTTMNDVR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA