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The map label for this gene is ninB [H]

Identifier: 192291406

GI number: 192291406

Start: 3289855

End: 3290271

Strand: Reverse

Name: ninB [H]

Synonym: Rpal_3030

Alternate gene names: 192291406

Gene position: 3290271-3289855 (Counterclockwise)

Preceding gene: 192291407

Following gene: 192291405

Centisome position: 57.28

GC content: 63.31

Gene sequence:

>417_bases
ATGACCAGCCGAGCCCTGTTGGTCCTCAACTCACGCGCCGAGCGGCAGAAGGCGATTGATTGGATCACGCGCGTTCCGGC
CGGGACGCGCGTCGAGTTCAAGGAGCCGCAGCGCACCCTTGATCAGAACAGCCGGATGTGGGCGATGCTAACCGATATCG
CCCGGCAGAAGACGCTTGAGGGCCGCAAGTGGACCACCGATCAGTGGAAGGTGATCTTTCTGCGCGCACTCGGCCACGAG
CACGAGTTCATTCCGGCGCTAAACGGCGCCGGCTTCATTCCCTACGGGCAGTCGAGCAGTGATCTCGGCGTTCGGGAAAT
GTCCGACCTGATCGAGTTCATGCTCGCTTGGGGCGCCGAGCAGACGCCACCGGTGGAGTGGAGCGAACCGCGAGCGAAGA
AGGAGGACGCGGCATGA

Upstream 100 bases:

>100_bases
GCGACCTCGCCCGCGAGCGGCACCCCGACAAGGGCGGAACGTCCGAACAGATGGCGCAGCTCAACAACGCTCGCGAAACC
GCGCTCCGGGAGATTGCACT

Downstream 100 bases:

>100_bases
CGTGGCGCGACACCGCAAAGGGCATCATCGCGAAGCTGACCGCCGATCTACCGAAGGACGCGCCGTTCTGCGACCGCGTG
AAGCTGCTGCGCGACAACTA

Product: NinB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTSRALLVLNSRAERQKAIDWITRVPAGTRVEFKEPQRTLDQNSRMWAMLTDIARQKTLEGRKWTTDQWKVIFLRALGHE
HEFIPALNGAGFIPYGQSSSDLGVREMSDLIEFMLAWGAEQTPPVEWSEPRAKKEDAA

Sequences:

>Translated_138_residues
MTSRALLVLNSRAERQKAIDWITRVPAGTRVEFKEPQRTLDQNSRMWAMLTDIARQKTLEGRKWTTDQWKVIFLRALGHE
HEFIPALNGAGFIPYGQSSSDLGVREMSDLIEFMLAWGAEQTPPVEWSEPRAKKEDAA
>Mature_137_residues
TSRALLVLNSRAERQKAIDWITRVPAGTRVEFKEPQRTLDQNSRMWAMLTDIARQKTLEGRKWTTDQWKVIFLRALGHEH
EFIPALNGAGFIPYGQSSSDLGVREMSDLIEFMLAWGAEQTPPVEWSEPRAKKEDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 15813; Mature: 15682

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRALLVLNSRAERQKAIDWITRVPAGTRVEFKEPQRTLDQNSRMWAMLTDIARQKTLE
CCCCEEEEECCCHHHHHHHHHHHHCCCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHHCC
GRKWTTDQWKVIFLRALGHEHEFIPALNGAGFIPYGQSSSDLGVREMSDLIEFMLAWGAE
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
QTPPVEWSEPRAKKEDAA
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSRALLVLNSRAERQKAIDWITRVPAGTRVEFKEPQRTLDQNSRMWAMLTDIARQKTLE
CCCEEEEECCCHHHHHHHHHHHHCCCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHHCC
GRKWTTDQWKVIFLRALGHEHEFIPALNGAGFIPYGQSSSDLGVREMSDLIEFMLAWGAE
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
QTPPVEWSEPRAKKEDAA
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]