Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192291321

Identifier: 192291321

GI number: 192291321

Start: 3216793

End: 3217362

Strand: Reverse

Name: 192291321

Synonym: Rpal_2943

Alternate gene names: NA

Gene position: 3217362-3216793 (Counterclockwise)

Preceding gene: 192291322

Following gene: 192291319

Centisome position: 56.01

GC content: 64.39

Gene sequence:

>570_bases
ATGACGCTGACACCGGAGCTTTTGCGCCAGACGCTTACGACAGTGCTCAACTTGGCGAAGCGAGAGGGCGGCTTTGACTG
CCGCCTGATCGGCACGGCCGCAGACCTGCTGCGCGGGGTGCCGATCGAGCCCGGCGACGTCGACTTTCTGATGCTCACAC
GAAGCGATGTCGACACCTTCGCGCGGGCACTTGCCGCCTACCGATGCCTGAGCCCGCCGACATGGATGGCCTGCTGCGTG
CAGTACTACACCGCATTTGAGGTGGGCGGCGTTCCGGTCGATGCCAGCACCGTCGAGTCTCCGTCGCAGTCCACTTTCAT
TGAGGCTTTCGGCAGTGGCCCCTGGACGCATTTTTCCGAAGTCGCGGTTGGCGATACACGCGTTGCGGTGGTGGCACCCG
AACTGCGGCTGGCAACCGAGCTCTGCCGCGACCGCAAGGACCGCGCCGAGATCATCGCCCGCTGGATGCGCGACCATGGC
TGCGACACGCCGCTGCTGAGAAACGCCATGAAGGCGCGCGGAATCGACGAAGCAACGCAGTCGTCCGTCATGGCAACCAT
TACCGGCTGA

Upstream 100 bases:

>100_bases
ATGTCTGGCCGGCATGGATTTTCCAGCACGCCGCCTCACGCGAAAGCATAGAAGCGCAAGAAGTCACACCCCTGCTAGGC
TGTCGTGGGAAGGACCTCTC

Downstream 100 bases:

>100_bases
CAGCGCGACGAGTGCAGGCGAGTATGCAGAAAGCAGAAAGGGCGCCACTGGGGCGCCCTTTGCGTTTCGCGATCGCGGTC
GCGTGTTACTTGGCAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTLTPELLRQTLTTVLNLAKREGGFDCRLIGTAADLLRGVPIEPGDVDFLMLTRSDVDTFARALAAYRCLSPPTWMACCV
QYYTAFEVGGVPVDASTVESPSQSTFIEAFGSGPWTHFSEVAVGDTRVAVVAPELRLATELCRDRKDRAEIIARWMRDHG
CDTPLLRNAMKARGIDEATQSSVMATITG

Sequences:

>Translated_189_residues
MTLTPELLRQTLTTVLNLAKREGGFDCRLIGTAADLLRGVPIEPGDVDFLMLTRSDVDTFARALAAYRCLSPPTWMACCV
QYYTAFEVGGVPVDASTVESPSQSTFIEAFGSGPWTHFSEVAVGDTRVAVVAPELRLATELCRDRKDRAEIIARWMRDHG
CDTPLLRNAMKARGIDEATQSSVMATITG
>Mature_188_residues
TLTPELLRQTLTTVLNLAKREGGFDCRLIGTAADLLRGVPIEPGDVDFLMLTRSDVDTFARALAAYRCLSPPTWMACCVQ
YYTAFEVGGVPVDASTVESPSQSTFIEAFGSGPWTHFSEVAVGDTRVAVVAPELRLATELCRDRKDRAEIIARWMRDHGC
DTPLLRNAMKARGIDEATQSSVMATITG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20631; Mature: 20500

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPELLRQTLTTVLNLAKREGGFDCRLIGTAADLLRGVPIEPGDVDFLMLTRSDVDTF
CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCEEEEEECCCHHHH
ARALAAYRCLSPPTWMACCVQYYTAFEVGGVPVDASTVESPSQSTFIEAFGSGPWTHFSE
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCHHHH
VAVGDTRVAVVAPELRLATELCRDRKDRAEIIARWMRDHGCDTPLLRNAMKARGIDEATQ
HCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
SSVMATITG
CCEEEEECC
>Mature Secondary Structure 
TLTPELLRQTLTTVLNLAKREGGFDCRLIGTAADLLRGVPIEPGDVDFLMLTRSDVDTF
CCCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCEEEEEECCCHHHH
ARALAAYRCLSPPTWMACCVQYYTAFEVGGVPVDASTVESPSQSTFIEAFGSGPWTHFSE
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCHHHH
VAVGDTRVAVVAPELRLATELCRDRKDRAEIIARWMRDHGCDTPLLRNAMKARGIDEATQ
HCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHH
SSVMATITG
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA