Click here to switch to the map view.

The map label for this gene is 192291317

Identifier: 192291317

GI number: 192291317

Start: 3211041

End: 3212273

Strand: Reverse

Name: 192291317

Synonym: Rpal_2939

Alternate gene names: NA

Gene position: 3212273-3211041 (Counterclockwise)

Preceding gene: 192291318

Following gene: 192291314

Centisome position: 55.92

GC content: 68.78

Gene sequence:

>1233_bases
ATGTCGTACCACGCGCCTATCCTCGTCGTAACCGACGATGAAAGTTCGCCGACCCTCGCAGCACTGACGGACGCCCAACT
GTTTCCAGTGCTGGCCTCGTCGTGGCCGGAGGCTGGTGAGGCGGTCGGCCGCCTGCGCCCGTCGGCCGTGGTCGCCGATG
GCGGTGCGCCCGCCAGGTCCCTTGAGGCAATCGCCCGCCAGATCGGTTTGCTGCAACCTTACGTGCCACTGATCGCGATC
GGGACCGATGGCGGCCTGCCCGACAACGTGATGCCGTTCAGCGCCGATCCGGGCGAGCTGATCCATCTGGCGCCACGGCT
GCGGGCCGCGCTCCGGGTGCGGACGTTGCACGCCACGGCGATGCGGCGCCTGACCGATCCGAGCGGCCTCACCGAACTGT
CCGACCATGATCCGCTGCAAGACGCGACCGTTCTGCTGATCGGCCGCGGCGCCGCCTATCCGGCGCTGTCGGTCGCACTC
GGCGAGCGCGTCGGGGTGGTCGGCGCGCTGTCAATCGAAGCTGCCGCCAAGCACCTCAACGCCCGCGATCTCGACGGCAT
CGTGCTGGCCGAGGGCTTCAGCCCGCGCGTGGTCGATGCCTTTCTCACCGTGCTGTCGGAAGACACCCGGTTCCGGCATC
TGCCGATCGTGGTCGGCGTTCCGGCACCGCACAGCAGCTTCGAGCTGCCCAATCTCGAATTCGTCGATGGCGATCCGGCG
CAGATCGTCGGCGCTGCGCTGCCGCTGGTGCGCCAGCACGCCTTCGAGGCCAGGCTCACCCGCACTTTGGCTTCGCTCGA
TGCCGGCGGCCTGCTCGATCCTCGCACCGGGCTTCTCACCGAGGCTGCGTTCGAGCGCGACTTTGCGACCGCTGTGTATC
AGGCCCAGACCCGCGGCGAAGGCCTGTCGGTCGCGCGCTTCGTCCTGCACCGTGCCGATCGGCGAGCGGTGAACGACGCC
GCACGGATCATCAGTCGGCTGATGCGTAAGATGGACTTCGGCACGCTGCAGACCGACGGCACGCTGCTGGTGGTGTTCGC
TGCGACCGACCTGCGCAACGCCCAGGCGATCGCACGGCGGCTCAGCAGCGTGATCAAGCAGACTGCTCATAGTGCCAGGC
GCGAGGCCCGCATCGATCCCGACGTCAGCGTCGCGACCCTGATGCCGGACGAATCCGCCCGCGCCATCCTGACCCGCGTC
GTGCAGCAGGATCGCCGCCGCGCTGCGTCGTGA

Upstream 100 bases:

>100_bases
CGACGCTCCGAAGGTCGATGAAAACCGCGCATCGACGTTGACGCCGCATTAACAGCGACGGCTTACGGTTTCCGCCTCGA
CCGCGGGAGCCGTTCTTGGA

Downstream 100 bases:

>100_bases
GAACCTCGCGCTGATCGCGATCTCCGTCATTGCGAGCAGAAGGCAAAGCAATCCAGAGGCTCCATACACAGTCTCTGGAT
TGCTTCGTCGGCTTCGCCTC

Product: diguanylate cyclase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSYHAPILVVTDDESSPTLAALTDAQLFPVLASSWPEAGEAVGRLRPSAVVADGGAPARSLEAIARQIGLLQPYVPLIAI
GTDGGLPDNVMPFSADPGELIHLAPRLRAALRVRTLHATAMRRLTDPSGLTELSDHDPLQDATVLLIGRGAAYPALSVAL
GERVGVVGALSIEAAAKHLNARDLDGIVLAEGFSPRVVDAFLTVLSEDTRFRHLPIVVGVPAPHSSFELPNLEFVDGDPA
QIVGAALPLVRQHAFEARLTRTLASLDAGGLLDPRTGLLTEAAFERDFATAVYQAQTRGEGLSVARFVLHRADRRAVNDA
ARIISRLMRKMDFGTLQTDGTLLVVFAATDLRNAQAIARRLSSVIKQTAHSARREARIDPDVSVATLMPDESARAILTRV
VQQDRRRAAS

Sequences:

>Translated_410_residues
MSYHAPILVVTDDESSPTLAALTDAQLFPVLASSWPEAGEAVGRLRPSAVVADGGAPARSLEAIARQIGLLQPYVPLIAI
GTDGGLPDNVMPFSADPGELIHLAPRLRAALRVRTLHATAMRRLTDPSGLTELSDHDPLQDATVLLIGRGAAYPALSVAL
GERVGVVGALSIEAAAKHLNARDLDGIVLAEGFSPRVVDAFLTVLSEDTRFRHLPIVVGVPAPHSSFELPNLEFVDGDPA
QIVGAALPLVRQHAFEARLTRTLASLDAGGLLDPRTGLLTEAAFERDFATAVYQAQTRGEGLSVARFVLHRADRRAVNDA
ARIISRLMRKMDFGTLQTDGTLLVVFAATDLRNAQAIARRLSSVIKQTAHSARREARIDPDVSVATLMPDESARAILTRV
VQQDRRRAAS
>Mature_409_residues
SYHAPILVVTDDESSPTLAALTDAQLFPVLASSWPEAGEAVGRLRPSAVVADGGAPARSLEAIARQIGLLQPYVPLIAIG
TDGGLPDNVMPFSADPGELIHLAPRLRAALRVRTLHATAMRRLTDPSGLTELSDHDPLQDATVLLIGRGAAYPALSVALG
ERVGVVGALSIEAAAKHLNARDLDGIVLAEGFSPRVVDAFLTVLSEDTRFRHLPIVVGVPAPHSSFELPNLEFVDGDPAQ
IVGAALPLVRQHAFEARLTRTLASLDAGGLLDPRTGLLTEAAFERDFATAVYQAQTRGEGLSVARFVLHRADRRAVNDAA
RIISRLMRKMDFGTLQTDGTLLVVFAATDLRNAQAIARRLSSVIKQTAHSARREARIDPDVSVATLMPDESARAILTRVV
QQDRRRAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43787; Mature: 43655

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHAPILVVTDDESSPTLAALTDAQLFPVLASSWPEAGEAVGRLRPSAVVADGGAPARS
CCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHH
LEAIARQIGLLQPYVPLIAIGTDGGLPDNVMPFSADPGELIHLAPRLRAALRVRTLHATA
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MRRLTDPSGLTELSDHDPLQDATVLLIGRGAAYPALSVALGERVGVVGALSIEAAAKHLN
HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEHHHHHHHHCC
ARDLDGIVLAEGFSPRVVDAFLTVLSEDTRFRHLPIVVGVPAPHSSFELPNLEFVDGDPA
CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHH
QIVGAALPLVRQHAFEARLTRTLASLDAGGLLDPRTGLLTEAAFERDFATAVYQAQTRGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GLSVARFVLHRADRRAVNDAARIISRLMRKMDFGTLQTDGTLLVVFAATDLRNAQAIARR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCHHHHHHHH
LSSVIKQTAHSARREARIDPDVSVATLMPDESARAILTRVVQQDRRRAAS
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYHAPILVVTDDESSPTLAALTDAQLFPVLASSWPEAGEAVGRLRPSAVVADGGAPARS
CCCCCEEEEECCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHH
LEAIARQIGLLQPYVPLIAIGTDGGLPDNVMPFSADPGELIHLAPRLRAALRVRTLHATA
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MRRLTDPSGLTELSDHDPLQDATVLLIGRGAAYPALSVALGERVGVVGALSIEAAAKHLN
HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEHHHHHHHHCC
ARDLDGIVLAEGFSPRVVDAFLTVLSEDTRFRHLPIVVGVPAPHSSFELPNLEFVDGDPA
CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCHH
QIVGAALPLVRQHAFEARLTRTLASLDAGGLLDPRTGLLTEAAFERDFATAVYQAQTRGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GLSVARFVLHRADRRAVNDAARIISRLMRKMDFGTLQTDGTLLVVFAATDLRNAQAIARR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCHHHHHHHH
LSSVIKQTAHSARREARIDPDVSVATLMPDESARAILTRVVQQDRRRAAS
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA