Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291310

Identifier: 192291310

GI number: 192291310

Start: 3198873

End: 3200264

Strand: Reverse

Name: 192291310

Synonym: Rpal_2932

Alternate gene names: NA

Gene position: 3200264-3198873 (Counterclockwise)

Preceding gene: 192291314

Following gene: 192291309

Centisome position: 55.71

GC content: 69.61

Gene sequence:

>1392_bases
ATGGCCAGAAAAACCGACGATCTGGCAGACAGCTTCGCGACCGAGGAAACGGGCGGCTGGCTGACCCGGCTGCTGGCAGA
TGAAGAAGAGCTCAACACCCAGGACAAGTGGCGCCTGGGGTCGTGGGCGATTGCCTCGCTGGGTGCCGTCGTGCTCGCCA
TCATGGCGGTCCAGAACGTCACCGACCGGCGGCGCGAGCAGACGGCGGCGGCGGATGTCGCCCAGCAGTCGCAGATGATC
CAACGCCTGGCCAAGGACACACAGACGGCGACCAGCCGGCTGACCGCGGCGATCGAGTCGCTGAACACCGACCGCGACCG
GCTGTATGCGCGCGTCGGCACGCTCGAACAGGGACTGGATTCAGTCACAGGATCGATCGCACGGGTGCAGTCGGGCAGCA
GCAAGCCGAATGCACCGGCGGCTGACAATCCGATAGACCGTTGGGGAGCGGCCGCGACGTTGCCGGAGATTCCGACCAAG
GAGACGCCCCCGCCTGCGCCGCCGGTGGCTCCGGTCGAAAGCAAGCCGAATTCACCCGCCGCGCCGTCCAAGAAGCTGGG
AGCGATCGAGCCGTCCCCCACCGCGGCCGCTCCGGCAGCATCCCCGGCGGTTGCTGCAACCATTCCAGTGACGCTGGCTC
CGACCAAGCCGGAAGAACCGGCCTCGGCGCAAGCTCCCGCTGCGGCGGAAGCGAAAAAGCCCTCGGACGACAAGGCAGTG
GCGGAAAAACCTCATGAAAGATCTCGGCTCGACAAGCCGCGGCTGGAGCCGGCCCCGCCGGAGCGGCCCGCGGCTCAGAC
GGCGGCGGCGATGATCTCGACCACGCCGTTGATGCCGTCGCGGTCGATCCTGGCGCCGCCGGATCCCGGAGCAGCCAAGC
TGCTCGAGCCGAAGGCCGCAACCTCGCCCGACGAAACCGGCGAAGATGCGGAGGCTGCCGCGGAAACGCCAGCGCCGCGC
ACCGACTTCGGCGTCGACCTCGGCGCTGCCAACACCGTTGAGGGGCTGCGCGGCTTGTGGCGCAAGCTGTCGAACACCCA
GAAGGCGCTCAAGGGCCTGCAGCCGATCATCATGATCAAGGAAAACGGCAACGCCACCCAGCTGCGGCTGGTCGCGGGGC
CGATCGCGGACGCCGCCGCCGCGGCGAAAGTTTGCGCGGCACTCGGCAGCGCGGACCGCGCCTGCGAAGCGTCGGTCTAT
GACGGCCAGCGTCTTCCGATGGCGGCGCCGGCGAGCGCGCCCCAAGCGGCACCGCAGCGCCCGGTGCGGCGGCATCGCGA
GCGCGTGACCCTGCAGCAGCCTGAACCGCCGCCGCCTCCGCCGGCACCCGCGCAGGATGCACCTCCACCGCCAAGGCCGG
CCACCCTGTCATCGATCCTCGGCATCCGCTAA

Upstream 100 bases:

>100_bases
CGGCCCGGGCGGCAACCGGCGCCCACCTGAAAACGGCAATTCCCTGATACTGTTGGGCATCTGATTCGCGTTGCGCGCTT
CAAGGCTTTGAGACCATCCG

Downstream 100 bases:

>100_bases
AAGCCTGGGGCGGCCTCGGTCACGAACGCCGCGTCAGCTTGTTCGCCCTCTCGAAGCGCAGCATAATCACGCTATGAAGA
AAAAGCCGTTCCGCCTTACT

Product: Sporulation domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MARKTDDLADSFATEETGGWLTRLLADEEELNTQDKWRLGSWAIASLGAVVLAIMAVQNVTDRRREQTAAADVAQQSQMI
QRLAKDTQTATSRLTAAIESLNTDRDRLYARVGTLEQGLDSVTGSIARVQSGSSKPNAPAADNPIDRWGAAATLPEIPTK
ETPPPAPPVAPVESKPNSPAAPSKKLGAIEPSPTAAAPAASPAVAATIPVTLAPTKPEEPASAQAPAAAEAKKPSDDKAV
AEKPHERSRLDKPRLEPAPPERPAAQTAAAMISTTPLMPSRSILAPPDPGAAKLLEPKAATSPDETGEDAEAAAETPAPR
TDFGVDLGAANTVEGLRGLWRKLSNTQKALKGLQPIIMIKENGNATQLRLVAGPIADAAAAAKVCAALGSADRACEASVY
DGQRLPMAAPASAPQAAPQRPVRRHRERVTLQQPEPPPPPPAPAQDAPPPPRPATLSSILGIR

Sequences:

>Translated_463_residues
MARKTDDLADSFATEETGGWLTRLLADEEELNTQDKWRLGSWAIASLGAVVLAIMAVQNVTDRRREQTAAADVAQQSQMI
QRLAKDTQTATSRLTAAIESLNTDRDRLYARVGTLEQGLDSVTGSIARVQSGSSKPNAPAADNPIDRWGAAATLPEIPTK
ETPPPAPPVAPVESKPNSPAAPSKKLGAIEPSPTAAAPAASPAVAATIPVTLAPTKPEEPASAQAPAAAEAKKPSDDKAV
AEKPHERSRLDKPRLEPAPPERPAAQTAAAMISTTPLMPSRSILAPPDPGAAKLLEPKAATSPDETGEDAEAAAETPAPR
TDFGVDLGAANTVEGLRGLWRKLSNTQKALKGLQPIIMIKENGNATQLRLVAGPIADAAAAAKVCAALGSADRACEASVY
DGQRLPMAAPASAPQAAPQRPVRRHRERVTLQQPEPPPPPPAPAQDAPPPPRPATLSSILGIR
>Mature_462_residues
ARKTDDLADSFATEETGGWLTRLLADEEELNTQDKWRLGSWAIASLGAVVLAIMAVQNVTDRRREQTAAADVAQQSQMIQ
RLAKDTQTATSRLTAAIESLNTDRDRLYARVGTLEQGLDSVTGSIARVQSGSSKPNAPAADNPIDRWGAAATLPEIPTKE
TPPPAPPVAPVESKPNSPAAPSKKLGAIEPSPTAAAPAASPAVAATIPVTLAPTKPEEPASAQAPAAAEAKKPSDDKAVA
EKPHERSRLDKPRLEPAPPERPAAQTAAAMISTTPLMPSRSILAPPDPGAAKLLEPKAATSPDETGEDAEAAAETPAPRT
DFGVDLGAANTVEGLRGLWRKLSNTQKALKGLQPIIMIKENGNATQLRLVAGPIADAAAAAKVCAALGSADRACEASVYD
GQRLPMAAPASAPQAAPQRPVRRHRERVTLQQPEPPPPPPAPAQDAPPPPRPATLSSILGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48180; Mature: 48048

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKTDDLADSFATEETGGWLTRLLADEEELNTQDKWRLGSWAIASLGAVVLAIMAVQNV
CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
TDRRREQTAAADVAQQSQMIQRLAKDTQTATSRLTAAIESLNTDRDRLYARVGTLEQGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SVTGSIARVQSGSSKPNAPAADNPIDRWGAAATLPEIPTKETPPPAPPVAPVESKPNSPA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APSKKLGAIEPSPTAAAPAASPAVAATIPVTLAPTKPEEPASAQAPAAAEAKKPSDDKAV
CCCHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCHHH
AEKPHERSRLDKPRLEPAPPERPAAQTAAAMISTTPLMPSRSILAPPDPGAAKLLEPKAA
HHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC
TSPDETGEDAEAAAETPAPRTDFGVDLGAANTVEGLRGLWRKLSNTQKALKGLQPIIMIK
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ENGNATQLRLVAGPIADAAAAAKVCAALGSADRACEASVYDGQRLPMAAPASAPQAAPQR
ECCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCH
PVRRHRERVTLQQPEPPPPPPAPAQDAPPPPRPATLSSILGIR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
ARKTDDLADSFATEETGGWLTRLLADEEELNTQDKWRLGSWAIASLGAVVLAIMAVQNV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
TDRRREQTAAADVAQQSQMIQRLAKDTQTATSRLTAAIESLNTDRDRLYARVGTLEQGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SVTGSIARVQSGSSKPNAPAADNPIDRWGAAATLPEIPTKETPPPAPPVAPVESKPNSPA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APSKKLGAIEPSPTAAAPAASPAVAATIPVTLAPTKPEEPASAQAPAAAEAKKPSDDKAV
CCCHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCHHH
AEKPHERSRLDKPRLEPAPPERPAAQTAAAMISTTPLMPSRSILAPPDPGAAKLLEPKAA
HHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC
TSPDETGEDAEAAAETPAPRTDFGVDLGAANTVEGLRGLWRKLSNTQKALKGLQPIIMIK
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
ENGNATQLRLVAGPIADAAAAAKVCAALGSADRACEASVYDGQRLPMAAPASAPQAAPQR
ECCCCEEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCH
PVRRHRERVTLQQPEPPPPPPAPAQDAPPPPRPATLSSILGIR
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA