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The map label for this gene is dppA [C]

Identifier: 192291296

GI number: 192291296

Start: 3185033

End: 3186649

Strand: Reverse

Name: dppA [C]

Synonym: Rpal_2918

Alternate gene names: 192291296

Gene position: 3186649-3185033 (Counterclockwise)

Preceding gene: 192291297

Following gene: 192291295

Centisome position: 55.48

GC content: 64.13

Gene sequence:

>1617_bases
ATGCCCCTCTCGCGGATCGAGATTAGCCGCCGCACTGCGCTACTGACGTCGGCCGCGATCGCCGCCAATGTGATCAACCC
AATGCGCGCCTTCGCACAGGAGACGCCGCGCAAGGGCGGCGTGTTCAACGTGCACTACGGCGCCGAACAGCGGCAGCTCA
ATCCGAGCCTGCAGGCCTCGACCGGCGTCTACATCATCGGCGGCAAGATCCAGGAACCGCTGGTCGACCTCGACGCAGCC
GGCAACCCGGTCGGCGTGCTGGCGGAAAGCTGGGAATCCACGCCTGACGGCAAGACCATCACCTTCAAGCTGCGCAAGGG
CGTGACCTGGCACGACGGCAAGCCGTTCACCTCCGAGGACGTCGCCTTCACGGCGATGAACATGTGGAAGAAGATCCTCA
ACTACGGATCGACGCTGCAGCTCTTCCTCACCACGGTCGACACGCCCGATCCGCAGACCGCGATCTTCCGCTACGAGCGG
CCGATGCCGCTGAACCTGCTGCTGCGCGCGCTGCCGGATCTCGGCTACGTCTCGGCCAAGCACATCTACGAGACCGGTGA
CATCCGCCAAAATCCGGCCAACCTGGCGCCGATCGGCACCGGCCCGTTCAAGTTCAACAAATACGAGCGCGGCCAGTACA
TCATCGCCGACCGCAACGACAATTACTGGCGGCCGAACGCCCCCTATCTCGACCGCATCGTCTGGAAGGTGATCACCGAC
CGTGCCGCGGCTGCGGCCCAGCTCGAAGCCGGCGGACTGCAGCTCAGCCCGTTCTCTGGTCTGACGATTTCCGACATGGC
TCGGCTCGGCAAGGACAAGCGCTTCATCGTCTCCACCAAGGGCAACGAAGGCAACGCCCGCACCAACACCATCGAATTCA
ACTTCCGCCGCAAGGAGCTGTCGGACATCCGTGTCCGCCGCGCCATCGCGCACGCCATCAACGTGCCGTTCTTCATCGAG
AACTTCCTCGGCGACTTCGCCAAGCTCGGCACCGGCCCGATCCCTTCGACCTCGACGGACTTCTATCCGGGCCCGAACAC
GCCGCAATATCCCTATGACAAGCAGAAAGCGATCGCCCTGCTCGACGAGGCCGGCCTGAAGCCCGGCGCCGGCGGCAACC
GGCTGTCGCTGCGGCTGCTCCCCGCGCCGTGGGGCGAGGACATCTCGCTTTGGGCGACCTTCATCCAGCAGTCGCTGGGT
GAGGTCGGCATTCAGGTCGAAGTGGTGCGCAACGACGGCGGCGGCTTTCTCAAGCAGGTCTATGACGAGCACGCGTTCGA
TCTCGCCACCGGCTGGCACCAGTATCGCAACGATCCCGCGGTCTCGACCACGGTGTGGTATCGCTCCGGTCAGCCGAAGG
GCGCGCCCTGGACCAACCAGTGGGGCTGGGAAGACCCGGCGATCGACAAGATCATCGACGACGCCGCGACCGAAGTCGAT
CCCGCCAAGCGCAAGGCGCTGTATGCCGACTTCGTCACCCGAGCCAATACCGAGCTGCCGATCTGGATGCCAATTGAGCA
ATTATTCGTCACGGTGATCACTGCGAAGGCGCGCAATCACTCCAATACGCCACGCTGGGCGTCATCGACCTGGCACGATC
TTTGGCTGGCCGAATAG

Upstream 100 bases:

>100_bases
AGAGACCGGAAAACTCAGCATGGTTTGAACGCGATGCACAAAGTATCGTCCCGGACAGCCAGCCGTTTTGCACCGCAATC
ACAACATTCCAGGAGAAGCG

Downstream 100 bases:

>100_bases
CGCCAACTCCGCCAGTATAGCTGCATGCGTATCCTGAACCTCGCGGGGCGGCGGCTCGCCGCCTCGATCCCGACCTTGTT
TCTTATCCTGATCGGCATCT

Product: family 5 extracellular solute-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MPLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQASTGVYIIGGKIQEPLVDLDAA
GNPVGVLAESWESTPDGKTITFKLRKGVTWHDGKPFTSEDVAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAIFRYER
PMPLNLLLRALPDLGYVSAKHIYETGDIRQNPANLAPIGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWKVITD
RAAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFIVSTKGNEGNARTNTIEFNFRRKELSDIRVRRAIAHAINVPFFIE
NFLGDFAKLGTGPIPSTSTDFYPGPNTPQYPYDKQKAIALLDEAGLKPGAGGNRLSLRLLPAPWGEDISLWATFIQQSLG
EVGIQVEVVRNDGGGFLKQVYDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDPAIDKIIDDAATEVD
PAKRKALYADFVTRANTELPIWMPIEQLFVTVITAKARNHSNTPRWASSTWHDLWLAE

Sequences:

>Translated_538_residues
MPLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQASTGVYIIGGKIQEPLVDLDAA
GNPVGVLAESWESTPDGKTITFKLRKGVTWHDGKPFTSEDVAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAIFRYER
PMPLNLLLRALPDLGYVSAKHIYETGDIRQNPANLAPIGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWKVITD
RAAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFIVSTKGNEGNARTNTIEFNFRRKELSDIRVRRAIAHAINVPFFIE
NFLGDFAKLGTGPIPSTSTDFYPGPNTPQYPYDKQKAIALLDEAGLKPGAGGNRLSLRLLPAPWGEDISLWATFIQQSLG
EVGIQVEVVRNDGGGFLKQVYDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDPAIDKIIDDAATEVD
PAKRKALYADFVTRANTELPIWMPIEQLFVTVITAKARNHSNTPRWASSTWHDLWLAE
>Mature_537_residues
PLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQASTGVYIIGGKIQEPLVDLDAAG
NPVGVLAESWESTPDGKTITFKLRKGVTWHDGKPFTSEDVAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAIFRYERP
MPLNLLLRALPDLGYVSAKHIYETGDIRQNPANLAPIGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWKVITDR
AAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFIVSTKGNEGNARTNTIEFNFRRKELSDIRVRRAIAHAINVPFFIEN
FLGDFAKLGTGPIPSTSTDFYPGPNTPQYPYDKQKAIALLDEAGLKPGAGGNRLSLRLLPAPWGEDISLWATFIQQSLGE
VGIQVEVVRNDGGGFLKQVYDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDPAIDKIIDDAATEVDP
AKRKALYADFVTRANTELPIWMPIEQLFVTVITAKARNHSNTPRWASSTWHDLWLAE

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=426, Percent_Identity=28.6384976525822, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787052, Length=425, Percent_Identity=24.9411764705882, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789887, Length=485, Percent_Identity=26.3917525773196, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1787762, Length=414, Percent_Identity=25.1207729468599, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787551, Length=524, Percent_Identity=24.4274809160305, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1787495, Length=482, Percent_Identity=22.1991701244813, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI87081878, Length=472, Percent_Identity=22.4576271186441, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 59975; Mature: 59843

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCC
TGVYIIGGKIQEPLVDLDAAGNPVGVLAESWESTPDGKTITFKLRKGVTWHDGKPFTSED
CCEEEECCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCCCCC
VAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAIFRYERPMPLNLLLRALPDLGYVSAK
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCHH
HIYETGDIRQNPANLAPIGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWKVITD
HEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
RAAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFIVSTKGNEGNARTNTIEFNFRRKEL
HHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEHHHH
SDIRVRRAIAHAINVPFFIENFLGDFAKLGTGPIPSTSTDFYPGPNTPQYPYDKQKAIAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LDEAGLKPGAGGNRLSLRLLPAPWGEDISLWATFIQQSLGEVGIQVEVVRNDGGGFLKQV
HHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHH
YDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDPAIDKIIDDAATEVD
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PAKRKALYADFVTRANTELPIWMPIEQLFVTVITAKARNHSNTPRWASSTWHDLWLAE
HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
PLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCC
TGVYIIGGKIQEPLVDLDAAGNPVGVLAESWESTPDGKTITFKLRKGVTWHDGKPFTSED
CCEEEECCCCCCCCEECCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCEECCCCCCCCCC
VAFTAMNMWKKILNYGSTLQLFLTTVDTPDPQTAIFRYERPMPLNLLLRALPDLGYVSAK
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCHH
HIYETGDIRQNPANLAPIGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWKVITD
HEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
RAAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFIVSTKGNEGNARTNTIEFNFRRKEL
HHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEHHHH
SDIRVRRAIAHAINVPFFIENFLGDFAKLGTGPIPSTSTDFYPGPNTPQYPYDKQKAIAL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LDEAGLKPGAGGNRLSLRLLPAPWGEDISLWATFIQQSLGEVGIQVEVVRNDGGGFLKQV
HHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHH
YDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDPAIDKIIDDAATEVD
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PAKRKALYADFVTRANTELPIWMPIEQLFVTVITAKARNHSNTPRWASSTWHDLWLAE
HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA