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The map label for this gene is ssuA [H]

Identifier: 192291262

GI number: 192291262

Start: 3145580

End: 3146527

Strand: Reverse

Name: ssuA [H]

Synonym: Rpal_2884

Alternate gene names: 192291262

Gene position: 3146527-3145580 (Counterclockwise)

Preceding gene: 192291267

Following gene: 192291261

Centisome position: 54.78

GC content: 62.03

Gene sequence:

>948_bases
ATGCAGCGCCGACAATTCCTCCAATTATCTGCCGGAACCGCTCTACTGCCGATTCTGTCACGCTCAGCCGCAGCTGAGCC
GCTGACCGAGATCCGCATCGGCTATCAGAAGAACGGCGTGTTGGTAATCGCGCGGCAACGGCGGACGCTGGAGGATCACT
TCGCCGCACAGAATATCGGCATCAAATGGCTGGAATTTTCGTCCGGTCCCCCGATGCTCGAGGCGATGAACGTCGGCAGC
ATTCACTATGGCGCCGTCGGTGACGCGCCGCCGATCTTTGCCCAGGCTGCTGGCGCTGCAATCGTCTACGCAGCAGGCCA
GCCGATCACCAACGGTCAGGGTATCCTGGTTCCGAAAGATTCGCCGATCCGCGGTCTCGCCGATCTCAAGGGCAAGCGCA
TCGGCTTCACAAAGGGGTCGAGCGCCCACAATGTGGTCTTGCTGGCGCTCAAGAAGGCCGGCCTGACCTATGGCGACATC
ACGCCGGTCTACCTGTCGCCGCCGGACGCCGGCCCCGCATTCGCGCAAGGCGGCATCGATGCCTGGTCGATCTGGGACCC
ATATTTCGCGATCGGCGAATTGAAGCAGAATGGGCGCGTGCTGATCAATGCATCCGAGGTCGGCCGGACCAACTCGTTCT
ACATCGCCAACCGTGAATTCGCTCAACGAAATGCGTTGATCCTCAAGCAGATCATCGACGTCACCAGCGCGACCGCGCGA
TGGGCAGAAGATCATCGCGGCGACGTCGCTCAGTCCCTCAGTGCCGTCACAGGCATCCCGCTCGACATCCAGACGATCGC
TGCCAACCGGTCGTCATTTGTGGTTGGGCCGGTGACCGACGAGATCGTCTCGACCCAGCAGGACGTCGCCGACCGCTTCC
ATCAGCTAGGCCTGATTCCCCGCCCGATCGTGGTGCGCGATGCAGTGTGGCGGCCGCCACAGGCTTGA

Upstream 100 bases:

>100_bases
TCCGTCTAAGCACGGGCGTTGCTATTTTTCCCAACGGCTCGACACCGCCTCCCGGGCCTCCCATCATCCCTCGCGACGAA
CCAACAGCGAGGGAGGCCAG

Downstream 100 bases:

>100_bases
AGCCGGCTAACAACAGAAGACAGGACAATCCAGGAGCACGGCGCATGACTGCCCCCCAGACACCATCCTCGAACTTCCTC
TGGTTTCTTCCGACCCACGG

Product: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQRRQFLQLSAGTALLPILSRSAAAEPLTEIRIGYQKNGVLVIARQRRTLEDHFAAQNIGIKWLEFSSGPPMLEAMNVGS
IHYGAVGDAPPIFAQAAGAAIVYAAGQPITNGQGILVPKDSPIRGLADLKGKRIGFTKGSSAHNVVLLALKKAGLTYGDI
TPVYLSPPDAGPAFAQGGIDAWSIWDPYFAIGELKQNGRVLINASEVGRTNSFYIANREFAQRNALILKQIIDVTSATAR
WAEDHRGDVAQSLSAVTGIPLDIQTIAANRSSFVVGPVTDEIVSTQQDVADRFHQLGLIPRPIVVRDAVWRPPQA

Sequences:

>Translated_315_residues
MQRRQFLQLSAGTALLPILSRSAAAEPLTEIRIGYQKNGVLVIARQRRTLEDHFAAQNIGIKWLEFSSGPPMLEAMNVGS
IHYGAVGDAPPIFAQAAGAAIVYAAGQPITNGQGILVPKDSPIRGLADLKGKRIGFTKGSSAHNVVLLALKKAGLTYGDI
TPVYLSPPDAGPAFAQGGIDAWSIWDPYFAIGELKQNGRVLINASEVGRTNSFYIANREFAQRNALILKQIIDVTSATAR
WAEDHRGDVAQSLSAVTGIPLDIQTIAANRSSFVVGPVTDEIVSTQQDVADRFHQLGLIPRPIVVRDAVWRPPQA
>Mature_315_residues
MQRRQFLQLSAGTALLPILSRSAAAEPLTEIRIGYQKNGVLVIARQRRTLEDHFAAQNIGIKWLEFSSGPPMLEAMNVGS
IHYGAVGDAPPIFAQAAGAAIVYAAGQPITNGQGILVPKDSPIRGLADLKGKRIGFTKGSSAHNVVLLALKKAGLTYGDI
TPVYLSPPDAGPAFAQGGIDAWSIWDPYFAIGELKQNGRVLINASEVGRTNSFYIANREFAQRNALILKQIIDVTSATAR
WAEDHRGDVAQSLSAVTGIPLDIQTIAANRSSFVVGPVTDEIVSTQQDVADRFHQLGLIPRPIVVRDAVWRPPQA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=304, Percent_Identity=40.7894736842105, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI87081727, Length=229, Percent_Identity=26.6375545851528, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 33833; Mature: 33833

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRQFLQLSAGTALLPILSRSAAAEPLTEIRIGYQKNGVLVIARQRRTLEDHFAAQNIG
CCCHHEEEECCCCHHHHHHHHHHCCCCHHHEEECEECCCEEEEECCCCCHHHHHHHHCCC
IKWLEFSSGPPMLEAMNVGSIHYGAVGDAPPIFAQAAGAAIVYAAGQPITNGQGILVPKD
EEEEEECCCCCCEEEECCCCEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEECC
SPIRGLADLKGKRIGFTKGSSAHNVVLLALKKAGLTYGDITPVYLSPPDAGPAFAQGGID
CCCCCHHHCCCCEEECCCCCCCCCEEEEEEECCCCEECCEEEEEECCCCCCCHHHHCCCC
AWSIWDPYFAIGELKQNGRVLINASEVGRTNSFYIANREFAQRNALILKQIIDVTSATAR
EEEECCCHHHHHHHCCCCEEEEEEHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
WAEDHRGDVAQSLSAVTGIPLDIQTIAANRSSFVVGPVTDEIVSTQQDVADRFHQLGLIP
HHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC
RPIVVRDAVWRPPQA
CCEEEECCCCCCCCC
>Mature Secondary Structure
MQRRQFLQLSAGTALLPILSRSAAAEPLTEIRIGYQKNGVLVIARQRRTLEDHFAAQNIG
CCCHHEEEECCCCHHHHHHHHHHCCCCHHHEEECEECCCEEEEECCCCCHHHHHHHHCCC
IKWLEFSSGPPMLEAMNVGSIHYGAVGDAPPIFAQAAGAAIVYAAGQPITNGQGILVPKD
EEEEEECCCCCCEEEECCCCEEECCCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEECC
SPIRGLADLKGKRIGFTKGSSAHNVVLLALKKAGLTYGDITPVYLSPPDAGPAFAQGGID
CCCCCHHHCCCCEEECCCCCCCCCEEEEEEECCCCEECCEEEEEECCCCCCCHHHHCCCC
AWSIWDPYFAIGELKQNGRVLINASEVGRTNSFYIANREFAQRNALILKQIIDVTSATAR
EEEECCCHHHHHHHCCCCEEEEEEHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
WAEDHRGDVAQSLSAVTGIPLDIQTIAANRSSFVVGPVTDEIVSTQQDVADRFHQLGLIP
HHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCC
RPIVVRDAVWRPPQA
CCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]