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The map label for this gene is ygaD [C]

Identifier: 192291237

GI number: 192291237

Start: 3118394

End: 3119014

Strand: Reverse

Name: ygaD [C]

Synonym: Rpal_2859

Alternate gene names: 192291237

Gene position: 3119014-3118394 (Counterclockwise)

Preceding gene: 192291238

Following gene: 192291234

Centisome position: 54.3

GC content: 69.89

Gene sequence:

>621_bases
ATGAGCAGCAACGACGCCCGCGCTCTCGCCCGCTCGTTGCTCGACCTCTGCCGTTCGCGCAAGCTGATGATCGCGACCGC
CGAGTCCTGCACCGGCGGCTTGGTCGCCGGCGCGCTGACCGACATTCCCGGCTCGTCGGACGTCATCGACCGCGGCTTCG
TGACCTATTCCAACGCCGCCAAGCATGATCTGCTCGGCGTCGAGAACGCCACGCTCACCACATTCGGCGCCGTCAGCAAG
GAGACCGCGATCGCCATGGCGGTCGGGGCGCTGGAGAATGCCGACGTCGATCTGGCGGTGTCGATCACCGGCATAGCCGG
CCCCGGCGGCGCAACGCCGGGCAAGCCGGTCGGCCTGGTCCATTTCGCCGTCGCCGCGCGCGACGGCCGCATCTCGCATC
GCGAGCAGCGCTTCGGCGCGATCGGCCGCAGCAACGTCCGTCAGCGCTCAGTGGTCGAAGCCCTACGGATGCTGCTGGAG
GTCGCCCGCGGCCCGAAGCCGCCGACCAAGGCCAAACGCGAAGTGGCCACCGGCGTGCACAAACGCGTCGCCCGCTCGCC
TCGCCGCGTCGCCGCCAAACGCCCGCAGCCGAAGCGGCCGGTGAAGCCGAAGAAGACTTAA

Upstream 100 bases:

>100_bases
GCGAGAAGCTCGGCTTCACCGGCCGTGAGGAAGGCATCGCGGCGACCGCATCCGCCACCATCCGGCTGCCCTGGGGCGCC
GACGGACTGGCCGGCTGACG

Downstream 100 bases:

>100_bases
CGGCGGTGCTATTCGTCAGGCCGGCATGAAGTGCACGGCGCGGCCCGATCATCGCCGTCACCCTCCGCGAAAGCGGAGGG
CCCAGTATTCCAGAGCGCTC

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSSNDARALARSLLDLCRSRKLMIATAESCTGGLVAGALTDIPGSSDVIDRGFVTYSNAAKHDLLGVENATLTTFGAVSK
ETAIAMAVGALENADVDLAVSITGIAGPGGATPGKPVGLVHFAVAARDGRISHREQRFGAIGRSNVRQRSVVEALRMLLE
VARGPKPPTKAKREVATGVHKRVARSPRRVAAKRPQPKRPVKPKKT

Sequences:

>Translated_206_residues
MSSNDARALARSLLDLCRSRKLMIATAESCTGGLVAGALTDIPGSSDVIDRGFVTYSNAAKHDLLGVENATLTTFGAVSK
ETAIAMAVGALENADVDLAVSITGIAGPGGATPGKPVGLVHFAVAARDGRISHREQRFGAIGRSNVRQRSVVEALRMLLE
VARGPKPPTKAKREVATGVHKRVARSPRRVAAKRPQPKRPVKPKKT
>Mature_205_residues
SSNDARALARSLLDLCRSRKLMIATAESCTGGLVAGALTDIPGSSDVIDRGFVTYSNAAKHDLLGVENATLTTFGAVSKE
TAIAMAVGALENADVDLAVSITGIAGPGGATPGKPVGLVHFAVAARDGRISHREQRFGAIGRSNVRQRSVVEALRMLLEV
ARGPKPPTKAKREVATGVHKRVARSPRRVAAKRPQPKRPVKPKKT

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=161, Percent_Identity=45.9627329192547, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1787818, Length=120, Percent_Identity=40.8333333333333, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 21633; Mature: 21502

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNDARALARSLLDLCRSRKLMIATAESCTGGLVAGALTDIPGSSDVIDRGFVTYSNAA
CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHCCCEEECCCC
KHDLLGVENATLTTFGAVSKETAIAMAVGALENADVDLAVSITGIAGPGGATPGKPVGLV
HHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHE
HFAVAARDGRISHREQRFGAIGRSNVRQRSVVEALRMLLEVARGPKPPTKAKREVATGVH
EEEEHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KRVARSPRRVAAKRPQPKRPVKPKKT
HHHHCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSNDARALARSLLDLCRSRKLMIATAESCTGGLVAGALTDIPGSSDVIDRGFVTYSNAA
CCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHCCCEEECCCC
KHDLLGVENATLTTFGAVSKETAIAMAVGALENADVDLAVSITGIAGPGGATPGKPVGLV
HHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHE
HFAVAARDGRISHREQRFGAIGRSNVRQRSVVEALRMLLEVARGPKPPTKAKREVATGVH
EEEEHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KRVARSPRRVAAKRPQPKRPVKPKKT
HHHHCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA