| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291214
Identifier: 192291214
GI number: 192291214
Start: 3088504
End: 3088773
Strand: Reverse
Name: 192291214
Synonym: Rpal_2836
Alternate gene names: NA
Gene position: 3088773-3088504 (Counterclockwise)
Preceding gene: 192291215
Following gene: 192291209
Centisome position: 53.77
GC content: 61.85
Gene sequence:
>270_bases ATGTCCGTGTTCAGGTCTTTCGGCGCCACGCTGGTGGCGGCGGTTGCTGTGCTGTTAGTCTCAGATGCTCTATTCGGCGA CGACAGCTACCGCTTCGACCGGTCGCTGTACGACAGCCGGCTTTATGCCCCACGACACGCGCCGGGCGCGGCGACGATAA ACGACTTCGACGAGGCGATGACTCCCGCCGAGCGCATCCGCGAAACCTTCAGCCAATTCACGGTCAGCAGCGCCAAGCGT TACACCTCGCGCGCGACAATCATCAGATAG
Upstream 100 bases:
>100_bases TTAACCCGCCGCCAACCGTGCTCCCAGGGCGCGCGACGCATTAAACTGAAACTTCATGGCGCCGGCCGATCCTTGCGCAA AACAAGGAGCGCGTCGGCTC
Downstream 100 bases:
>100_bases CGTGACGGCTTTCGATCGTCAGGCTCAGCGCAGGATCTGGCTGAGGAACAGCTTGGTCCGCGCGTGTTGCGGATGGGCGA AGAACTCCTTCGGCTCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSVFRSFGATLVAAVAVLLVSDALFGDDSYRFDRSLYDSRLYAPRHAPGAATINDFDEAMTPAERIRETFSQFTVSSAKR YTSRATIIR
Sequences:
>Translated_89_residues MSVFRSFGATLVAAVAVLLVSDALFGDDSYRFDRSLYDSRLYAPRHAPGAATINDFDEAMTPAERIRETFSQFTVSSAKR YTSRATIIR >Mature_88_residues SVFRSFGATLVAAVAVLLVSDALFGDDSYRFDRSLYDSRLYAPRHAPGAATINDFDEAMTPAERIRETFSQFTVSSAKRY TSRATIIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9917; Mature: 9786
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFRSFGATLVAAVAVLLVSDALFGDDSYRFDRSLYDSRLYAPRHAPGAATINDFDEAM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC TPAERIRETFSQFTVSSAKRYTSRATIIR CHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVFRSFGATLVAAVAVLLVSDALFGDDSYRFDRSLYDSRLYAPRHAPGAATINDFDEAM CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC TPAERIRETFSQFTVSSAKRYTSRATIIR CHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA