Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192291185

Identifier: 192291185

GI number: 192291185

Start: 3049288

End: 3050562

Strand: Reverse

Name: 192291185

Synonym: Rpal_2806

Alternate gene names: NA

Gene position: 3050562-3049288 (Counterclockwise)

Preceding gene: 192291190

Following gene: 192291178

Centisome position: 53.11

GC content: 62.9

Gene sequence:

>1275_bases
ATGGAAATTCAGGCCATTCTGCCCAGCAAAGGGCGCGATCTGCGGCTCGACCTGTTCCGCGGCGTCGCCAACTGGGCGAT
CTACCTGGATCACATCCCGAACAACGTGGTGAACTGGATCACAACCCGGAACTGGGGATTCAGCGACGCCGCCGATCTGT
TCGTCTTCATCTCCGGCTACACCGCCTCGTTCGTGTACGCCAAGATGATGCTGGAGCGCGGCTTCATCGTCGGCGGCACC
CGGCTGACCAAGCGGGTGTGGCAGCTCTACGTCGCACACATCGTGCTGTTCGTGATCTACATCGTGGCGATCGGCTACGT
CGCGCAGCGCTTTTCCGATCCCGAGATCATCAACGAGTTCAACGTCGCCGGCCTCATCGCCAATCCGATCGAGACGCTGC
GCCAGGGCCTGCTGCTGAAATTCAAGCCGGTCAATCTCGACGTGCTGCCGCTCTACATCGTGCTGATGGGCCTGTTCCCG
CCGGTGCTGTGGCTGATGCTGCGCCGTCCCGACGCGGTGATGATCGGCTCGTTCGTACTGTATTTCGCCGCCCGCTATTT
CGAATGGAATCTGCAGGCGTTTCCGGAAGGCACCTGGTACTTCAATCCGTTCTGCTGGCAGCTGCTGTTCGTGTTCGGCG
CGTGGTGCGCGCTCGGCGGCACGGTGCGGTCGCGCTCGATCATCGCTTCGCGCGGCATGCTGTGGTTCTGCCTGGCGTAT
CTGGTGTTCGCGCTGGTGATGACGATGGCCGGCCGCTTCCAGGAATTCGGCGACCTGTTCCCGCGCTGGCTTTACGACGC
CTTCAATCCCAACGACAAAACCAACCTCGCCCCATACCGCTTCCTGCATTTCGCGGTGATCGTGGTGCTGGTGATCCGGT
TCGTGCCGAAGGACTGGAAGGGTCTGGAATGGCGCGGCTTCGATCCCCTGATCAAATGCGGCCAGCAATCGCTCGCGGTG
TTCTGCGTCGGCGTGTTTCTGTCGTTCGTGGCGCATTTCGAGCTGACCATGAGCTCCGGCTCGCTGATGGCGCAGATCCT
GGTCAGCGTCATCGGCATCGCGCTGATGACCCTGGTCGCCTACTACATCTCCTGGTCGAAACAGCAGGACAAACCCGCCC
GCCCCGCCGCCAAGCCCGCCACCCAGGCTGCTCCAGCTGCTCCGGTCGCTGCCTCTGGTCCCGAGGCTCAACCGGCGCGC
TCGCAGCTTCAGGACAGCGGCGTGCCAGCAGTCTCGCCGGCGATGATCGCGGCGGCGCAGTCGAGCCCGGAATAG

Upstream 100 bases:

>100_bases
CCTGCGGTTTCGTTTCCTGATTTCCTATATTCTGTCCCCGGCACCGTGACAATCGTGGGTCCTGCCGGCGGGCTTCGCAA
CAATACGGACGATCGGCTCC

Downstream 100 bases:

>100_bases
AGATCGTGGCTGGCGCCATAGCGGGCGCCGTTCTCGCTCCATGACGCACGGCGCCCTGGTGCCGACGCCTGACGCAATGC
CTCGCTCAGGTTGCCGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Acyltransferase Family Protein; Transmembrane Protein OpgC

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGYTASFVYAKMMLERGFIVGGT
RLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEFNVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFP
PVLWLMLRRPDAVMIGSFVLYFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY
LVFALVMTMAGRFQEFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWKGLEWRGFDPLIKCGQQSLAV
FCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVAYYISWSKQQDKPARPAAKPATQAAPAAPVAASGPEAQPAR
SQLQDSGVPAVSPAMIAAAQSSPE

Sequences:

>Translated_424_residues
MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGYTASFVYAKMMLERGFIVGGT
RLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEFNVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFP
PVLWLMLRRPDAVMIGSFVLYFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY
LVFALVMTMAGRFQEFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWKGLEWRGFDPLIKCGQQSLAV
FCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVAYYISWSKQQDKPARPAAKPATQAAPAAPVAASGPEAQPAR
SQLQDSGVPAVSPAMIAAAQSSPE
>Mature_424_residues
MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGYTASFVYAKMMLERGFIVGGT
RLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEFNVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFP
PVLWLMLRRPDAVMIGSFVLYFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY
LVFALVMTMAGRFQEFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWKGLEWRGFDPLIKCGQQSLAV
FCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVAYYISWSKQQDKPARPAAKPATQAAPAAPVAASGPEAQPAR
SQLQDSGVPAVSPAMIAAAQSSPE

Specific function: Unknown

COG id: COG4645

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47589; Mature: 47589

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGY
CCCEEECCCCCCCCHHHHHHHHHHHHHEEHHCCCHHHHHHHCCCCCCCCHHHHHHEECCH
TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEF
HHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRRPDAVMIGSFVL
CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY
HHHHHHHHCCCEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
LVFALVMTMAGRFQEFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GLEWRGFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVA
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YYISWSKQQDKPARPAAKPATQAAPAAPVAASGPEAQPARSQLQDSGVPAVSPAMIAAAQ
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCC
SSPE
CCCC
>Mature Secondary Structure
MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNWGFSDAADLFVFISGY
CCCEEECCCCCCCCHHHHHHHHHHHHHEEHHCCCHHHHHHHCCCCCCCCHHHHHHEECCH
TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEF
HHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRRPDAVMIGSFVL
CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIASRGMLWFCLAY
HHHHHHHHCCCEECCCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
LVFALVMTMAGRFQEFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
GLEWRGFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLMAQILVSVIGIALMTLVA
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YYISWSKQQDKPARPAAKPATQAAPAAPVAASGPEAQPARSQLQDSGVPAVSPAMIAAAQ
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHCC
SSPE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA