| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is mltB [H]
Identifier: 192291169
GI number: 192291169
Start: 3033898
End: 3035127
Strand: Reverse
Name: mltB [H]
Synonym: Rpal_2790
Alternate gene names: 192291169
Gene position: 3035127-3033898 (Counterclockwise)
Preceding gene: 192291171
Following gene: 192291168
Centisome position: 52.84
GC content: 67.32
Gene sequence:
>1230_bases ATGGTCGATCGCGATTCCCCAACCTCTCTCACCCGTCGCCGCCTGCTGCAGACGGCCGTCGGCGCCGCCATGATGCTGCC GGCCGCAGCTTCCGCCGCGGCGCCGGCCGGCTTCGATGAATGGCGCGACGCGTTCCGGGCGAAGGCGCTCGCCAAAGGCG TCTCGCCCCGCACCTGGGATCGGGTGATGGGATCGCTCGAACCCGACATGAGCGTGTTCAAGAACTTCCAGAAGCAACCG GAATTCAACGAGCAGCTCTGGCAGTACATCAACCGTCGGGTGTCGGACTGGCGGATCACCGCCGGCCGCGAGGCGCTGCG CAAGAACGAAGCGTTGTTCGCGCGGATCGAGCGCGACTTCGGCGTCGAGCGCGGCACACTGCTGGCGCTGTGGGGCGTCG AGAGCGCCTATGGCGATCCGCTGGTGCAGCAGAACCATATGCGTCCGGTCTTCCCCTCCCTCGCAGCGCTGGCTTGGCGC GAGCCGCGGCGGCGTCCGTATTGGGAGACCGAGCTGATCAATGCGCTGCGGATCGTCGACAAGGGCTGGTCGACGCCGGA GGAAATGCGCGGCTCCTGGGCCGGCGCGATGGGCCACAGCCAATGGATGCCCGAGGTTTGGCTGAACGTCGGCATCGACT ATGACGGCGACGGACGCGTATCGCCGTTCGGCCGGCCCGACGACGCGCTCGGATCGACTGCGAAGTATCTGGTCCGGCGC GGCAACTATCACCGCGGCGAGCATTGGGGCTACGAGGTCGAAGGCCCCGGCGGCGCGGTCAGCGGCAGCCGCAGCTATCT GGCGTGGTCGCGCTCCGGCGTCTCCCGCGCCGACGGCCAGCCGTTTCCTGATTCCTCTGCCAGCGCAACCATGTGGGTGC CGGTCGACGGAGGTCCGAAATTCCTGATCGGGCCGAATTTCTACGCGGTGAAGAGCTACAACCCGTCGATGAACTACGCG CTCGCGATCTGCCATCTCGGTGATCGCATTCTCGGCGGCAGCCCGTTCATCCATCCGTTCCCCGGATCGGAGCGCGCGCT GACGCTCGCCGAGGTGCAGGAGATGCAGACGCGGCTGACAAGCGCCGGCTTCGACACCGGCGGCACCGACGGCCGGGTCG GCAACGACACCATGAAGGCGATCCGGGACTTCCAAATCAAATCCGGCCTTCGGCCTGCCGACGGCTATGGCGGACTGAAG GTGCTGGCGCGACTGCGGCAGGGTGGATAG
Upstream 100 bases:
>100_bases GTCGCTGCGGCTTGGTGGAACAATCCGCGCCTTGCCTGCGCAGCTGCTATCGAGCCGCAGCAGCTTTGGGGACGCCCGCA ATGCCGCTACACTGCCGGCT
Downstream 100 bases:
>100_bases AGGCCGCAGGCTTTTCGATGATGCGACATCACTGGACGTGGCACCGAATCAAGGCGCTGGCGCACGAAGAGTGGCGCGAG CTCGTCACCTTTAATCCGAG
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MVDRDSPTSLTRRRLLQTAVGAAMMLPAAASAAAPAGFDEWRDAFRAKALAKGVSPRTWDRVMGSLEPDMSVFKNFQKQP EFNEQLWQYINRRVSDWRITAGREALRKNEALFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWR EPRRRPYWETELINALRIVDKGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSPFGRPDDALGSTAKYLVRR GNYHRGEHWGYEVEGPGGAVSGSRSYLAWSRSGVSRADGQPFPDSSASATMWVPVDGGPKFLIGPNFYAVKSYNPSMNYA LAICHLGDRILGGSPFIHPFPGSERALTLAEVQEMQTRLTSAGFDTGGTDGRVGNDTMKAIRDFQIKSGLRPADGYGGLK VLARLRQGG
Sequences:
>Translated_409_residues MVDRDSPTSLTRRRLLQTAVGAAMMLPAAASAAAPAGFDEWRDAFRAKALAKGVSPRTWDRVMGSLEPDMSVFKNFQKQP EFNEQLWQYINRRVSDWRITAGREALRKNEALFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWR EPRRRPYWETELINALRIVDKGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSPFGRPDDALGSTAKYLVRR GNYHRGEHWGYEVEGPGGAVSGSRSYLAWSRSGVSRADGQPFPDSSASATMWVPVDGGPKFLIGPNFYAVKSYNPSMNYA LAICHLGDRILGGSPFIHPFPGSERALTLAEVQEMQTRLTSAGFDTGGTDGRVGNDTMKAIRDFQIKSGLRPADGYGGLK VLARLRQGG >Mature_409_residues MVDRDSPTSLTRRRLLQTAVGAAMMLPAAASAAAPAGFDEWRDAFRAKALAKGVSPRTWDRVMGSLEPDMSVFKNFQKQP EFNEQLWQYINRRVSDWRITAGREALRKNEALFARIERDFGVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWR EPRRRPYWETELINALRIVDKGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSPFGRPDDALGSTAKYLVRR GNYHRGEHWGYEVEGPGGAVSGSRSYLAWSRSGVSRADGQPFPDSSASATMWVPVDGGPKFLIGPNFYAVKSYNPSMNYA LAICHLGDRILGGSPFIHPFPGSERALTLAEVQEMQTRLTSAGFDTGGTDGRVGNDTMKAIRDFQIKSGLRPADGYGGLK VLARLRQGG
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=274, Percent_Identity=26.6423357664234, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 45287; Mature: 45287
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDRDSPTSLTRRRLLQTAVGAAMMLPAAASAAAPAGFDEWRDAFRAKALAKGVSPRTWD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH RVMGSLEPDMSVFKNFQKQPEFNEQLWQYINRRVSDWRITAGREALRKNEALFARIERDF HHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHC GVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWREPRRRPYWETELINALRIVD CCCCCCEEEEECCCHHHCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSPFGRPDDALGSTAKYLVRR CCCCCHHHHCCCHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GNYHRGEHWGYEVEGPGGAVSGSRSYLAWSRSGVSRADGQPFPDSSASATMWVPVDGGPK CCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCE FLIGPNFYAVKSYNPSMNYALAICHLGDRILGGSPFIHPFPGSERALTLAEVQEMQTRLT EEECCCEEEEECCCCCCCCEEEEEHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SAGFDTGGTDGRVGNDTMKAIRDFQIKSGLRPADGYGGLKVLARLRQGG HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVDRDSPTSLTRRRLLQTAVGAAMMLPAAASAAAPAGFDEWRDAFRAKALAKGVSPRTWD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH RVMGSLEPDMSVFKNFQKQPEFNEQLWQYINRRVSDWRITAGREALRKNEALFARIERDF HHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHC GVERGTLLALWGVESAYGDPLVQQNHMRPVFPSLAALAWREPRRRPYWETELINALRIVD CCCCCCEEEEECCCHHHCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KGWSTPEEMRGSWAGAMGHSQWMPEVWLNVGIDYDGDGRVSPFGRPDDALGSTAKYLVRR CCCCCHHHHCCCHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC GNYHRGEHWGYEVEGPGGAVSGSRSYLAWSRSGVSRADGQPFPDSSASATMWVPVDGGPK CCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCE FLIGPNFYAVKSYNPSMNYALAICHLGDRILGGSPFIHPFPGSERALTLAEVQEMQTRLT EEECCCEEEEECCCCCCCCEEEEEHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SAGFDTGGTDGRVGNDTMKAIRDFQIKSGLRPADGYGGLKVLARLRQGG HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]