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The map label for this gene is glxA [H]

Identifier: 192291055

GI number: 192291055

Start: 2904310

End: 2905344

Strand: Reverse

Name: glxA [H]

Synonym: Rpal_2675

Alternate gene names: 192291055

Gene position: 2905344-2904310 (Counterclockwise)

Preceding gene: 192291058

Following gene: 192291054

Centisome position: 50.58

GC content: 66.67

Gene sequence:

>1035_bases
ATGGCCCGCGTATCTTCGCCGCCGGAGATCGGCCTGGTGCTGTACCCCGGGGTGCAGCGTGCAAGCGTCGATGGGCTGAC
CGACCTGCTCACCGTCGCCGATCGCAACGCACGGCAGCGCCTGAACCAGACCGCACCGCTCCTCCGCATCAGCCACCTCG
CCTATGACGAGGCGCAGGATCGCATCGTCCGCGTATTCGACAGTCTGCCGGCTGAGGACGGTGCCCCGACGATCCTGGTG
CTGTTGCCGAGCCTCGAGAAGCCGGCAGAGCCCCCTCAAGCTGGCGGATTGGTGGACTATCTGAAATCCCGGCATCAGGA
GGGCACGGTGCTCGCCTCAGTATGCGCCGGCACGTTCCTGCTCGCCGCGACCGGCGTGCTGGCGGGCCGCGTCGCCACCA
CCCACTGGTCCTATGCCGAAGCGCTGGCGGAGCGGTTCACGGATATCCGCGTCGATGCCGACAAGCTGATCATCGACGAT
GGCGATATCATCACCGCCGGCGGCATGATGGCATGGACCGATCTTGGCCTCACGCTGATTGAGCGCCTGCTCGGTCCGGC
GACGATGATCGAAACGGCGCGCAGCTTCATCATCGATCCGCCGGGCCGCGACCAGCGCGCCTACAGCGTGTTCTCGCCGC
GGCTCCGGCACGGCGACGCCGCGATCCTGAAGGTGCAGCACTGGCTGCAACGGATTGATCTTCCGGAGGTGACCGTCGCG
GCAATGGCGCAGCATGCGGGGCTTGAACCGCGCACCTTTCAGCGCCGGTTCCAGCGCGCCACCGGCTTTGCGCCGCTGAC
TTATTGCCAGAACCTGCGGATCGGCCGCGCCCGCATCATGCTGGAAGGCACGACGCTGCCGGTCGACCAGATCGCCTGGC
AATGCGGCTACAAGGACCCGAAGTCGTTTCGCAAGGTGTTCGCCAAGATCGCCGGACTGTCGCCGGGACAGTATCGGCAA
AGGTTTTCTGCGGCACGCCAAGAGCCCGCACCGCGCCCGCGCAACGCACCGGCACATGCGGGTGAGCATCGCTGA

Upstream 100 bases:

>100_bases
CCTCCCTTGAGCGCCGTTGCGGCGCCGATGGCCGCACGCTAGGTGAAAGACACGCCGCACAGGATGGGCGGACCCGACAA
ATCGAGGGGCGAAACCGACA

Downstream 100 bases:

>100_bases
CCCGCTCGCGCGTTCGCTGGATCAAATGATAGGATTGAGCCCGCTGGTTCCGCTTAAAGTCCCGAGTCGTTTCCATGGGA
CGTCGCAGCCGCCAGGCGCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MARVSSPPEIGLVLYPGVQRASVDGLTDLLTVADRNARQRLNQTAPLLRISHLAYDEAQDRIVRVFDSLPAEDGAPTILV
LLPSLEKPAEPPQAGGLVDYLKSRHQEGTVLASVCAGTFLLAATGVLAGRVATTHWSYAEALAERFTDIRVDADKLIIDD
GDIITAGGMMAWTDLGLTLIERLLGPATMIETARSFIIDPPGRDQRAYSVFSPRLRHGDAAILKVQHWLQRIDLPEVTVA
AMAQHAGLEPRTFQRRFQRATGFAPLTYCQNLRIGRARIMLEGTTLPVDQIAWQCGYKDPKSFRKVFAKIAGLSPGQYRQ
RFSAARQEPAPRPRNAPAHAGEHR

Sequences:

>Translated_344_residues
MARVSSPPEIGLVLYPGVQRASVDGLTDLLTVADRNARQRLNQTAPLLRISHLAYDEAQDRIVRVFDSLPAEDGAPTILV
LLPSLEKPAEPPQAGGLVDYLKSRHQEGTVLASVCAGTFLLAATGVLAGRVATTHWSYAEALAERFTDIRVDADKLIIDD
GDIITAGGMMAWTDLGLTLIERLLGPATMIETARSFIIDPPGRDQRAYSVFSPRLRHGDAAILKVQHWLQRIDLPEVTVA
AMAQHAGLEPRTFQRRFQRATGFAPLTYCQNLRIGRARIMLEGTTLPVDQIAWQCGYKDPKSFRKVFAKIAGLSPGQYRQ
RFSAARQEPAPRPRNAPAHAGEHR
>Mature_343_residues
ARVSSPPEIGLVLYPGVQRASVDGLTDLLTVADRNARQRLNQTAPLLRISHLAYDEAQDRIVRVFDSLPAEDGAPTILVL
LPSLEKPAEPPQAGGLVDYLKSRHQEGTVLASVCAGTFLLAATGVLAGRVATTHWSYAEALAERFTDIRVDADKLIIDDG
DIITAGGMMAWTDLGLTLIERLLGPATMIETARSFIIDPPGRDQRAYSVFSPRLRHGDAAILKVQHWLQRIDLPEVTVAA
MAQHAGLEPRTFQRRFQRATGFAPLTYCQNLRIGRARIMLEGTTLPVDQIAWQCGYKDPKSFRKVFAKIAGLSPGQYRQR
FSAARQEPAPRPRNAPAHAGEHR

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788725, Length=160, Percent_Identity=26.25, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37811; Mature: 37680

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVSSPPEIGLVLYPGVQRASVDGLTDLLTVADRNARQRLNQTAPLLRISHLAYDEAQD
CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVRVFDSLPAEDGAPTILVLLPSLEKPAEPPQAGGLVDYLKSRHQEGTVLASVCAGTFL
HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH
LAATGVLAGRVATTHWSYAEALAERFTDIRVDADKLIIDDGDIITAGGMMAWTDLGLTLI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCEECCCEEEEECCCEEEECCCHHHHHHHHHHH
ERLLGPATMIETARSFIIDPPGRDQRAYSVFSPRLRHGDAAILKVQHWLQRIDLPEVTVA
HHHHCHHHHHHHHHHHEECCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHHHCCCCHHHHH
AMAQHAGLEPRTFQRRFQRATGFAPLTYCQNLRIGRARIMLEGTTLPVDQIAWQCGYKDP
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCH
KSFRKVFAKIAGLSPGQYRQRFSAARQEPAPRPRNAPAHAGEHR
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARVSSPPEIGLVLYPGVQRASVDGLTDLLTVADRNARQRLNQTAPLLRISHLAYDEAQD
CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVRVFDSLPAEDGAPTILVLLPSLEKPAEPPQAGGLVDYLKSRHQEGTVLASVCAGTFL
HHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH
LAATGVLAGRVATTHWSYAEALAERFTDIRVDADKLIIDDGDIITAGGMMAWTDLGLTLI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCEECCCEEEEECCCEEEECCCHHHHHHHHHHH
ERLLGPATMIETARSFIIDPPGRDQRAYSVFSPRLRHGDAAILKVQHWLQRIDLPEVTVA
HHHHCHHHHHHHHHHHEECCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHHHCCCCHHHHH
AMAQHAGLEPRTFQRRFQRATGFAPLTYCQNLRIGRARIMLEGTTLPVDQIAWQCGYKDP
HHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCCH
KSFRKVFAKIAGLSPGQYRQRFSAARQEPAPRPRNAPAHAGEHR
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]