| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is menE [H]
Identifier: 192291011
GI number: 192291011
Start: 2847374
End: 2848639
Strand: Reverse
Name: menE [H]
Synonym: Rpal_2630
Alternate gene names: 192291011
Gene position: 2848639-2847374 (Counterclockwise)
Preceding gene: 192291012
Following gene: 192291010
Centisome position: 49.59
GC content: 64.85
Gene sequence:
>1266_bases ATGATTCAGGTTGGCGACCGATTCTACGATCAAGCCATCGTGCAGACGATGGGCGCCCGCGCGGCTGAAGCAGTGGGCCT CAGTGATCGACCCGAGCTGAGCTTTGCGGTCTGCCTGTCCGATCCGGCAGAATTCCTGGCGCTGCTACTGGCGATCCGCG AAGCCGGCGCCAGCGTGCTGCCGATCCATCCCTCAACGCCGCGCGCTGCGGCACGCCGGCTGGCGATTGACCTTGGTTGC CAACGGCTGGTGACCGATGAGCTCGCCATCGAGGATCTCGGCGGAGAAGACCCCGGCCCCGGCGGACTGCTGCAGACCAC ATCCGGCACCACCGGCGAACCGAAGCGGATCGCCCGCAGTTGGGCGGAGATCGATCGCGAGATCGATAGCTACGTCGCAA CTTTCGTCGCCCCGCAGGATATGACGCCGCTGATCGCATGTCCGATTACACATTCGTACGGACTGATCTGCGGCGTTCTG GTCGCGCTCCGGCGGGGCCAAGTGCCGCACATTCTCGGTACGGCCAATCCGAAGTATCTCATCGCTCGCCTACGCCAGAC CCGCCAGCCACTGTTGTATTCATCGCCCGCCATGCTCCACGCCATCGCCCGCCTGCTGCCGGCAGGCGAGATGATCCACG CGGCGATGACCTCCGGCACTCTGCTGCCCGATCAGTGGCTGATGACGATCCGGGCCCGCACGACGCATCTGTTTCAGCAG TATGGCTGCTCGGAAGCCGGATGCGTGGCGATCAATCCAAACCTGTCCGCATCAGGTGACATGGGAGCGCCGCTACCCCA TCTCCGTGTCGAGGCCGGAGATACCGATCAGCCGCGGGAGATTGTGCTCCACGTCGGCGACCGCGCAATCCGGACCGCCG ATCTCGGCTACACAAAAGCCGATGGCACGTTGGTGTTCGTCGGGCGCCTCGACGACACCATCAACGTCTCAGGCCTCAAT GTCTATCCGAAGGAGGTCGAAGACGTGGTGGCGATGCCGGGCGTGACCGATGCGGTCGTATTCCGGCAGCTGGATTCGCT CGCGGGCGAGCGGGTGGCCGTGGCGTTCAGCGCCGAGCACAGCATTGCGCCCGCGGACCTGCGCAACTGGTGTATCAAGA ACCTGGCTGCCCATCAGGTCCCGATGGAGACCGTGCGCCTCCCCCGGCTGCCACGGCAGGCTAACGGCAAGATCAGCCGA CGAGAGATCGCCGCCCTGCATGCTGAAGGACGCCTCGAGCTTTTGGCAGAGGAGACCGCCGCGTGA
Upstream 100 bases:
>100_bases AAAGCCTGCTTGCCCGAAAACTCGGCCTGTGGGGCGACGCTCTCCGACACAAGGTGCCCAATCCACTTGCGGCGGTCGTG CCGCTTGCACGGGAGTATGC
Downstream 100 bases:
>100_bases CTCGCCAGGAGATCACGGCCGCGATTCACCAGGTGCTTGCCGAGCGGATGAACAACCGGCATCTCGACGGCTTTGGCCCA CAATCGCGGCTGAATGCCGA
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MIQVGDRFYDQAIVQTMGARAAEAVGLSDRPELSFAVCLSDPAEFLALLLAIREAGASVLPIHPSTPRAAARRLAIDLGC QRLVTDELAIEDLGGEDPGPGGLLQTTSGTTGEPKRIARSWAEIDREIDSYVATFVAPQDMTPLIACPITHSYGLICGVL VALRRGQVPHILGTANPKYLIARLRQTRQPLLYSSPAMLHAIARLLPAGEMIHAAMTSGTLLPDQWLMTIRARTTHLFQQ YGCSEAGCVAINPNLSASGDMGAPLPHLRVEAGDTDQPREIVLHVGDRAIRTADLGYTKADGTLVFVGRLDDTINVSGLN VYPKEVEDVVAMPGVTDAVVFRQLDSLAGERVAVAFSAEHSIAPADLRNWCIKNLAAHQVPMETVRLPRLPRQANGKISR REIAALHAEGRLELLAEETAA
Sequences:
>Translated_421_residues MIQVGDRFYDQAIVQTMGARAAEAVGLSDRPELSFAVCLSDPAEFLALLLAIREAGASVLPIHPSTPRAAARRLAIDLGC QRLVTDELAIEDLGGEDPGPGGLLQTTSGTTGEPKRIARSWAEIDREIDSYVATFVAPQDMTPLIACPITHSYGLICGVL VALRRGQVPHILGTANPKYLIARLRQTRQPLLYSSPAMLHAIARLLPAGEMIHAAMTSGTLLPDQWLMTIRARTTHLFQQ YGCSEAGCVAINPNLSASGDMGAPLPHLRVEAGDTDQPREIVLHVGDRAIRTADLGYTKADGTLVFVGRLDDTINVSGLN VYPKEVEDVVAMPGVTDAVVFRQLDSLAGERVAVAFSAEHSIAPADLRNWCIKNLAAHQVPMETVRLPRLPRQANGKISR REIAALHAEGRLELLAEETAA >Mature_421_residues MIQVGDRFYDQAIVQTMGARAAEAVGLSDRPELSFAVCLSDPAEFLALLLAIREAGASVLPIHPSTPRAAARRLAIDLGC QRLVTDELAIEDLGGEDPGPGGLLQTTSGTTGEPKRIARSWAEIDREIDSYVATFVAPQDMTPLIACPITHSYGLICGVL VALRRGQVPHILGTANPKYLIARLRQTRQPLLYSSPAMLHAIARLLPAGEMIHAAMTSGTLLPDQWLMTIRARTTHLFQQ YGCSEAGCVAINPNLSASGDMGAPLPHLRVEAGDTDQPREIVLHVGDRAIRTADLGYTKADGTLVFVGRLDDTINVSGLN VYPKEVEDVVAMPGVTDAVVFRQLDSLAGERVAVAFSAEHSIAPADLRNWCIKNLAAHQVPMETVRLPRLPRQANGKISR REIAALHAEGRLELLAEETAA
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Partially Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788107, Length=379, Percent_Identity=25.3298153034301, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6319699, Length=361, Percent_Identity=26.8698060941828, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581924, Length=360, Percent_Identity=24.4444444444444, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 45296; Mature: 45296
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVGDRFYDQAIVQTMGARAAEAVGLSDRPELSFAVCLSDPAEFLALLLAIREAGASVL CCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEE PIHPSTPRAAARRLAIDLGCQRLVTDELAIEDLGGEDPGPGGLLQTTSGTTGEPKRIARS ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHH WAEIDREIDSYVATFVAPQDMTPLIACPITHSYGLICGVLVALRRGQVPHILGTANPKYL HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHH IARLRQTRQPLLYSSPAMLHAIARLLPAGEMIHAAMTSGTLLPDQWLMTIRARTTHLFQQ HHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YGCSEAGCVAINPNLSASGDMGAPLPHLRVEAGDTDQPREIVLHVGDRAIRTADLGYTKA HCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHEEEECCCCCEEEECCCEEEC DGTLVFVGRLDDTINVSGLNVYPKEVEDVVAMPGVTDAVVFRQLDSLAGERVAVAFSAEH CCEEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCC SIAPADLRNWCIKNLAAHQVPMETVRLPRLPRQANGKISRREIAALHAEGRLELLAEETA CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEHHHHCC A C >Mature Secondary Structure MIQVGDRFYDQAIVQTMGARAAEAVGLSDRPELSFAVCLSDPAEFLALLLAIREAGASVL CCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEE PIHPSTPRAAARRLAIDLGCQRLVTDELAIEDLGGEDPGPGGLLQTTSGTTGEPKRIARS ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHH WAEIDREIDSYVATFVAPQDMTPLIACPITHSYGLICGVLVALRRGQVPHILGTANPKYL HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHH IARLRQTRQPLLYSSPAMLHAIARLLPAGEMIHAAMTSGTLLPDQWLMTIRARTTHLFQQ HHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH YGCSEAGCVAINPNLSASGDMGAPLPHLRVEAGDTDQPREIVLHVGDRAIRTADLGYTKA HCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHEEEECCCCCEEEECCCEEEC DGTLVFVGRLDDTINVSGLNVYPKEVEDVVAMPGVTDAVVFRQLDSLAGERVAVAFSAEH CCEEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCC SIAPADLRNWCIKNLAAHQVPMETVRLPRLPRQANGKISRREIAALHAEGRLELLAEETA CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]