| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is bhuA [H]
Identifier: 192291003
GI number: 192291003
Start: 2838170
End: 2840401
Strand: Reverse
Name: bhuA [H]
Synonym: Rpal_2622
Alternate gene names: 192291003
Gene position: 2840401-2838170 (Counterclockwise)
Preceding gene: 192291004
Following gene: 192291002
Centisome position: 49.45
GC content: 62.54
Gene sequence:
>2232_bases ATGCGAAGATTTGCCAGTGTCGCCGGATCGAGGTGCGGGGCCTCCCTCTGTGCGTTGGCACTTCTTGTGACCGCGTCAGA AGCCCAGCCGCAAGCGGACGCGACGTTCGACTTCAGGATCGAGCCCAAGCCTCGACTGTCGGCGCTGGCCGACTTCACGA CGACAACGGGGATTCAGGTCGTCAGGCTCGGCGGAGGTGCAATCAGTGGCGCCTCACCCGCTGTTAGCGGCCAACTCGCG GCCGAGGCCGCGTTACGCGAGATCCTCGCCGGATCGAACCTCACCTATCGCTTCACCGGCCCCCGCACCGTCGCCATCGA GTCATCGCCCGACGCCGCCATCGCGCTCGAACCGATCAGCGTGACTGAGATCAGCATCGGGCGCGGCGGCGTCAGCGAGA TCGATATCACCAGCGCCGATATCGAACGCCGGAATGCGACCGACCTGAGAGGTGTGTTCCGCGGCGAACCGAGCGTTGTC GTCGGCTCGTCATTGCCGATGTCCCAGAAGCTCTATGTCCAAGGCATCGAGGAAACCAATCTGGCGATCTCGATCGACGG CTCACGCCAAAACAACAAGGTATTCCACCACAACGCCACCACGATGATCGACCCCAGCCTGCTCAGAGCAGTCCGCGTCG ATGCTGGTGTGGCACCCGCCGATGCCGGCCCCGGAGCGCTCGGAGGCGCGATCGCCTACTTCACCAAGGATGCGCGAGAC TTCCTCTCCGCGGACGGTTTCGGCGGCTCGATCAAGTCGACCTTCAACTTCAACGGCAATGTCTCGACCACCAATCTCAC CAGCTACAGCCGCCAAGGTGGATTCGAAGCGCTCGGCTCGTTCACCTATGGAAAAGGCAGCGAGTTTCGAGCCGGTAACG GCGAACAGGTGCTCGGCAGCGCGACCGATGTCTTGAGCGGCCTCGGCAAGCTCGCCTATCAGAGCGCCGACGGGCATCGC TTGTCCATCAGTCACGAGCAGATCCGTGACGACGCCATCCGGCCGTTCCGCGCCAACGCTGTGCAGATCTACGGCCCGCA GACGACGCCGCTCGTCCGCCCCTACAAGCTCGACCGGCAAAACACGGTCGTCAGCTACTCCAATGTCTCTCCGGAGGGGT GGTGGAATCCAAACGTCGTGCTTGGCTACAACCGCACCCAGGTTGCGGTCGACCAATACGCCGGTGCCACGCCCGACACC TACAGCTACACCAGCGAGGGCCTGACCGACAGCCTCAACGGTAAGGTGGAGAACAAGTTCGAACTGTCGATCGCTGACAT CGTCGCCGGCATCGATTTCTATCGTGACCGCGCCAGATCGATCGAACGGACCTATCGAACTGCCGAGACCGCCGACAATG TCGGCGCCTACGCTCAGGCCCGCCTTAAATTCGCGGACAGCGCCAAGCTGTCGTTCGGGCTGCGCGGCGACCATCAGCAG TTCGGCGGCATCAGTGGCTTTCGCTCCAGCGACCAGGGCTTGAGCAGCAACGTATCGGGCGAATACGCCCTGACCAGTCA CCTGACCGCAAAGGCCGGTTATTCCAACGTCTGGGCCGGCGTTCCGCTTGCAGAAAACTACGTGCAGAATCCGGCCTGGA GCTACGGCACCGGACCGCGTTCAGTCACCTCGGACAACGCAACCGCTGCACTGGTCGCGCTCTTTACGAGCTTCCGGATT GAGGGCGGCGTATTCCGCACCCGGATCTGGGATGCACGAGTCCCGTTGTGGGCCGCCGACATGGCGCTACGTGCCTTCGA CGTGCAGAGCCAAGGCTTTCACGTCGGCGGCACCTATTATTGGGATGATGGATTCGCTCGCCTGCAGTTCGTTCGGACCG ACACGTCGATCAATGGCAGGCCGGCCGACAGCTATCTCGGCAAGTACCTGACCGCTCCGATCGGCGACATCCTGACGGTT CAGGTCGCGCACAGTTTCGCGTCATTGAGTCTGACAATCGGCGGTGATGTCGAGATCGCATTCGAGGACGACAGCCTGCT GAACCCCGTCACGGGGATCGGTCGTCTCGACGGTTACGAAGTCGTCAACATCTTTGCCGAACACCGTCCGTTCGCCCTGC CCTCGCTCACGCTTCGCGGCGAGGTTCGCAATCTGTTGAATCAGACCTATGCGGCGCGCGGCACTTACGGCCTCGAATAC GGCAGCGGCGTGGTGCGGCCACTCTATGACCCAGGCCGCTCTTACCTCGTCAGCGCCAAGCTGACCTTCTAG
Upstream 100 bases:
>100_bases AATGCCTCTCACTATTTTTACGGGTTTCGCCTCGCACGCACGTTGATCAGCGAGGGCTCTGAACGCGTACCCCTCGACCG TCGTGGGGGACGTCAAGACC
Downstream 100 bases:
>100_bases CTGGCCCCCGCCCATGCAAAATGACCTGCAAGTGATCATTCGCGCGATGCGCCGGGACGATGCGGCCGACATCTATGAGA TCGTCAATCAGCACGCCTTC
Product: TonB-dependent receptor plug
Products: NA
Alternate protein names: Brucella heme uptake protein A [H]
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MRRFASVAGSRCGASLCALALLVTASEAQPQADATFDFRIEPKPRLSALADFTTTTGIQVVRLGGGAISGASPAVSGQLA AEAALREILAGSNLTYRFTGPRTVAIESSPDAAIALEPISVTEISIGRGGVSEIDITSADIERRNATDLRGVFRGEPSVV VGSSLPMSQKLYVQGIEETNLAISIDGSRQNNKVFHHNATTMIDPSLLRAVRVDAGVAPADAGPGALGGAIAYFTKDARD FLSADGFGGSIKSTFNFNGNVSTTNLTSYSRQGGFEALGSFTYGKGSEFRAGNGEQVLGSATDVLSGLGKLAYQSADGHR LSISHEQIRDDAIRPFRANAVQIYGPQTTPLVRPYKLDRQNTVVSYSNVSPEGWWNPNVVLGYNRTQVAVDQYAGATPDT YSYTSEGLTDSLNGKVENKFELSIADIVAGIDFYRDRARSIERTYRTAETADNVGAYAQARLKFADSAKLSFGLRGDHQQ FGGISGFRSSDQGLSSNVSGEYALTSHLTAKAGYSNVWAGVPLAENYVQNPAWSYGTGPRSVTSDNATAALVALFTSFRI EGGVFRTRIWDARVPLWAADMALRAFDVQSQGFHVGGTYYWDDGFARLQFVRTDTSINGRPADSYLGKYLTAPIGDILTV QVAHSFASLSLTIGGDVEIAFEDDSLLNPVTGIGRLDGYEVVNIFAEHRPFALPSLTLRGEVRNLLNQTYAARGTYGLEY GSGVVRPLYDPGRSYLVSAKLTF
Sequences:
>Translated_743_residues MRRFASVAGSRCGASLCALALLVTASEAQPQADATFDFRIEPKPRLSALADFTTTTGIQVVRLGGGAISGASPAVSGQLA AEAALREILAGSNLTYRFTGPRTVAIESSPDAAIALEPISVTEISIGRGGVSEIDITSADIERRNATDLRGVFRGEPSVV VGSSLPMSQKLYVQGIEETNLAISIDGSRQNNKVFHHNATTMIDPSLLRAVRVDAGVAPADAGPGALGGAIAYFTKDARD FLSADGFGGSIKSTFNFNGNVSTTNLTSYSRQGGFEALGSFTYGKGSEFRAGNGEQVLGSATDVLSGLGKLAYQSADGHR LSISHEQIRDDAIRPFRANAVQIYGPQTTPLVRPYKLDRQNTVVSYSNVSPEGWWNPNVVLGYNRTQVAVDQYAGATPDT YSYTSEGLTDSLNGKVENKFELSIADIVAGIDFYRDRARSIERTYRTAETADNVGAYAQARLKFADSAKLSFGLRGDHQQ FGGISGFRSSDQGLSSNVSGEYALTSHLTAKAGYSNVWAGVPLAENYVQNPAWSYGTGPRSVTSDNATAALVALFTSFRI EGGVFRTRIWDARVPLWAADMALRAFDVQSQGFHVGGTYYWDDGFARLQFVRTDTSINGRPADSYLGKYLTAPIGDILTV QVAHSFASLSLTIGGDVEIAFEDDSLLNPVTGIGRLDGYEVVNIFAEHRPFALPSLTLRGEVRNLLNQTYAARGTYGLEY GSGVVRPLYDPGRSYLVSAKLTF >Mature_743_residues MRRFASVAGSRCGASLCALALLVTASEAQPQADATFDFRIEPKPRLSALADFTTTTGIQVVRLGGGAISGASPAVSGQLA AEAALREILAGSNLTYRFTGPRTVAIESSPDAAIALEPISVTEISIGRGGVSEIDITSADIERRNATDLRGVFRGEPSVV VGSSLPMSQKLYVQGIEETNLAISIDGSRQNNKVFHHNATTMIDPSLLRAVRVDAGVAPADAGPGALGGAIAYFTKDARD FLSADGFGGSIKSTFNFNGNVSTTNLTSYSRQGGFEALGSFTYGKGSEFRAGNGEQVLGSATDVLSGLGKLAYQSADGHR LSISHEQIRDDAIRPFRANAVQIYGPQTTPLVRPYKLDRQNTVVSYSNVSPEGWWNPNVVLGYNRTQVAVDQYAGATPDT YSYTSEGLTDSLNGKVENKFELSIADIVAGIDFYRDRARSIERTYRTAETADNVGAYAQARLKFADSAKLSFGLRGDHQQ FGGISGFRSSDQGLSSNVSGEYALTSHLTAKAGYSNVWAGVPLAENYVQNPAWSYGTGPRSVTSDNATAALVALFTSFRI EGGVFRTRIWDARVPLWAADMALRAFDVQSQGFHVGGTYYWDDGFARLQFVRTDTSINGRPADSYLGKYLTAPIGDILTV QVAHSFASLSLTIGGDVEIAFEDDSLLNPVTGIGRLDGYEVVNIFAEHRPFALPSLTLRGEVRNLLNQTYAARGTYGLEY GSGVVRPLYDPGRSYLVSAKLTF
Specific function: Heme transporter playing an important role in stationary-phase iron acquisition and required for maintenance of chronic infection in mice [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79479; Mature: 79479
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFASVAGSRCGASLCALALLVTASEAQPQADATFDFRIEPKPRLSALADFTTTTGIQV CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEE VRLGGGAISGASPAVSGQLAAEAALREILAGSNLTYRFTGPRTVAIESSPDAAIALEPIS EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCEEEEECCE VTEISIGRGGVSEIDITSADIERRNATDLRGVFRGEPSVVVGSSLPMSQKLYVQGIEETN EEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCC LAISIDGSRQNNKVFHHNATTMIDPSLLRAVRVDAGVAPADAGPGALGGAIAYFTKDARD EEEEECCCCCCCEEEEECCCEEECHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH FLSADGFGGSIKSTFNFNGNVSTTNLTSYSRQGGFEALGSFTYGKGSEFRAGNGEQVLGS HHCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEHHH ATDVLSGLGKLAYQSADGHRLSISHEQIRDDAIRPFRANAVQIYGPQTTPLVRPYKLDRQ HHHHHHHHHHHHEECCCCCEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEECCC NTVVSYSNVSPEGWWNPNVVLGYNRTQVAVDQYAGATPDTYSYTSEGLTDSLNGKVENKF CEEEEECCCCCCCCCCCCEEEECCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE ELSIADIVAGIDFYRDRARSIERTYRTAETADNVGAYAQARLKFADSAKLSFGLRGDHQQ EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCEEEECCCCCHHH FGGISGFRSSDQGLSSNVSGEYALTSHLTAKAGYSNVWAGVPLAENYVQNPAWSYGTGPR HCCCCCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCC SVTSDNATAALVALFTSFRIEGGVFRTRIWDARVPLWAADMALRAFDVQSQGFHVGGTYY CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHEEEECCCCCEEECCEEE WDDGFARLQFVRTDTSINGRPADSYLGKYLTAPIGDILTVQVAHSFASLSLTIGGDVEIA ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHEEHEEECCEEEEEEEECCEEEEE FEDDSLLNPVTGIGRLDGYEVVNIFAEHRPFALPSLTLRGEVRNLLNQTYAARGTYGLEY ECCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCEEC GSGVVRPLYDPGRSYLVSAKLTF CCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MRRFASVAGSRCGASLCALALLVTASEAQPQADATFDFRIEPKPRLSALADFTTTTGIQV CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEE VRLGGGAISGASPAVSGQLAAEAALREILAGSNLTYRFTGPRTVAIESSPDAAIALEPIS EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCEEEEECCE VTEISIGRGGVSEIDITSADIERRNATDLRGVFRGEPSVVVGSSLPMSQKLYVQGIEETN EEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCC LAISIDGSRQNNKVFHHNATTMIDPSLLRAVRVDAGVAPADAGPGALGGAIAYFTKDARD EEEEECCCCCCCEEEEECCCEEECHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH FLSADGFGGSIKSTFNFNGNVSTTNLTSYSRQGGFEALGSFTYGKGSEFRAGNGEQVLGS HHCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEHHH ATDVLSGLGKLAYQSADGHRLSISHEQIRDDAIRPFRANAVQIYGPQTTPLVRPYKLDRQ HHHHHHHHHHHHEECCCCCEEECCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEECCC NTVVSYSNVSPEGWWNPNVVLGYNRTQVAVDQYAGATPDTYSYTSEGLTDSLNGKVENKF CEEEEECCCCCCCCCCCCEEEECCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE ELSIADIVAGIDFYRDRARSIERTYRTAETADNVGAYAQARLKFADSAKLSFGLRGDHQQ EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCEEEECCCCCHHH FGGISGFRSSDQGLSSNVSGEYALTSHLTAKAGYSNVWAGVPLAENYVQNPAWSYGTGPR HCCCCCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCC SVTSDNATAALVALFTSFRIEGGVFRTRIWDARVPLWAADMALRAFDVQSQGFHVGGTYY CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHEEEECCCCCEEECCEEE WDDGFARLQFVRTDTSINGRPADSYLGKYLTAPIGDILTVQVAHSFASLSLTIGGDVEIA ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHEEHEEECCEEEEEEEECCEEEEE FEDDSLLNPVTGIGRLDGYEVVNIFAEHRPFALPSLTLRGEVRNLLNQTYAARGTYGLEY ECCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCEEC GSGVVRPLYDPGRSYLVSAKLTF CCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA