| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290961
Identifier: 192290961
GI number: 192290961
Start: 2788929
End: 2789267
Strand: Reverse
Name: 192290961
Synonym: Rpal_2578
Alternate gene names: NA
Gene position: 2789267-2788929 (Counterclockwise)
Preceding gene: 192290962
Following gene: 192290960
Centisome position: 48.56
GC content: 61.95
Gene sequence:
>339_bases TTGGCTAAGAAGAAGGGCAAGCGCGGCAAGGGCCTGAAGCGTCGCGAGATCGAGCAGTTGCTCGCTGGACAACTCACCCT CGCCGGCAACCGCCAGCGGCAAGGAATGCTCGGCAATCTCGGCGGGCTGCTCCCCAAAGGCCGCAACGAGCAGTTCCTGC TCGGCCTGCTGATCGGCGGCCTCGCAGCCTACGTGCTTTCCGAAGAGGAACTACGTAGCAAGCTGTTCAAGGGGGCAATC AAAGCCTACGCCAACATGATGGGCAGCGTCGCCGAGTTGAAGGAACAGTTCGCCGACCTGAGTGCGGAAGTCGAGGCCGA ACAGAGCGGCACCGTATGA
Upstream 100 bases:
>100_bases CTCACTGCGCTCGCCGGCGGCGCGCTCGGCGCCCTGGCTCTGGAAACCCTCTTGGCGACCGAATTGGCGGTCGCGACCGA AACATCCGAGGAGATTGGAC
Downstream 100 bases:
>100_bases CCGATAAGCGGTGGCTGTCGGCAGTCGAGATCGTTCACCGCCTGCCCGGCCGCATCCGCTTGCGCTATCAGCGCCGCTCC AAGACTTCGGACCCTGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAKKKGKRGKGLKRREIEQLLAGQLTLAGNRQRQGMLGNLGGLLPKGRNEQFLLGLLIGGLAAYVLSEEELRSKLFKGAI KAYANMMGSVAELKEQFADLSAEVEAEQSGTV
Sequences:
>Translated_112_residues MAKKKGKRGKGLKRREIEQLLAGQLTLAGNRQRQGMLGNLGGLLPKGRNEQFLLGLLIGGLAAYVLSEEELRSKLFKGAI KAYANMMGSVAELKEQFADLSAEVEAEQSGTV >Mature_111_residues AKKKGKRGKGLKRREIEQLLAGQLTLAGNRQRQGMLGNLGGLLPKGRNEQFLLGLLIGGLAAYVLSEEELRSKLFKGAIK AYANMMGSVAELKEQFADLSAEVEAEQSGTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12089; Mature: 11958
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKGKRGKGLKRREIEQLLAGQLTLAGNRQRQGMLGNLGGLLPKGRNEQFLLGLLIGG CCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH LAAYVLSEEELRSKLFKGAIKAYANMMGSVAELKEQFADLSAEVEAEQSGTV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AKKKGKRGKGLKRREIEQLLAGQLTLAGNRQRQGMLGNLGGLLPKGRNEQFLLGLLIGG CCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH LAAYVLSEEELRSKLFKGAIKAYANMMGSVAELKEQFADLSAEVEAEQSGTV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA