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The map label for this gene is yobV [H]

Identifier: 192290890

GI number: 192290890

Start: 2705650

End: 2706615

Strand: Reverse

Name: yobV [H]

Synonym: Rpal_2507

Alternate gene names: 192290890

Gene position: 2706615-2705650 (Counterclockwise)

Preceding gene: 192290894

Following gene: 192290889

Centisome position: 47.12

GC content: 69.25

Gene sequence:

>966_bases
ATGCTGTCGATCCTCACAACTTTGCAGGCCAAGGGCCGGGTCACCGCACCGGAGCTGGCCGAGGCCTGCGAGGTGTCGGT
GCGCACGATCTATCGCGACATCGACGCGCTCGCAGCGTCCGGCGTGCCGGTCTATGCCGACCGCGGCGCCGAGGGCGGCT
ATCGGCTGCTCGACGGCTATCGCGTGCGGCTGAACGGACTGTCGCAGAGCGAAGCCGGCGCGCTGTTCCTCGCCGGCCTG
CCCGGCCCGGCCGCCGCACTCGGTCTCGATGCGGCGATGATCGCCGCGCAGAACAAGCTGATGGCGGCGCTGCCGGCAAA
CTTACGCGAAGACGCCGGACGGATGCAGGAGCGCTTCTACCTCGACGCGCCGGGCTGGTTCGGCGAGACCGAAGAGCCGA
AGCATCTGCGCGCCGTCGCCGCCGCGGTGCTGCGCGGGACGTTGATCAAGATCCGCTACGAGAGCTGGCGCGGGCAGAAG
CGCCGCCGCGTCGCCCCGCTCGGCCTCGTGCTGAAGGGCGGCAGCTGGTATCTCGCCGGACAGGTCGACGGCAGCGTCCG
GACCTACCGGATCGCGCGCGTGCTCGACTGCACGCCGCTCGACGACCGCTTCACGCGTCCGGCCGATTTCGATCTCGCCG
CGTATTGGCAAAGCGCGACGCTGCGCATGGAAGCCGAGCTGCATCCCAACATCGCCACCGTCCGGCTGTCGCCGCTCGGC
GTGAAGCTGCTGAATGCGCTGAGCCAGCCCTATGTCCGATCGCGCACAGAGCTCGATGACATCGCCGATGCGGACGGTTG
GCGCGTCGCGAAGATCCCGGTCGGCACAACGTCCTGGCACGCAGCCGCTGAACTGCTTCGCCTCGGACCGGAGGCCGAAG
TGCTGGAGCCGGCGGAGCTCCGCGCAACGATCGCCGAGATGACCCGGGCGATGGCGGGGCGATATGCCACTGCGCTTACA
TCTTGA

Upstream 100 bases:

>100_bases
ACGGCGGTCTCCATCAGCCAGCTTGCGAGGCACCGTCCTAGCAGCCCATACCTGACATCCTGTGTCAGGTATGGTTCAAT
CCATCATGCGCGCGAGCCGA

Downstream 100 bases:

>100_bases
TACTCATGATCCCCACCGCAGCCCGCGCCGATTTCGTGCTGGCTGCGCTCGGGGACGCGACGGCCAGGACATCACCAAGC
GGCGATGAACCGGTGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLSILTTLQAKGRVTAPELAEACEVSVRTIYRDIDALAASGVPVYADRGAEGGYRLLDGYRVRLNGLSQSEAGALFLAGL
PGPAAALGLDAAMIAAQNKLMAALPANLREDAGRMQERFYLDAPGWFGETEEPKHLRAVAAAVLRGTLIKIRYESWRGQK
RRRVAPLGLVLKGGSWYLAGQVDGSVRTYRIARVLDCTPLDDRFTRPADFDLAAYWQSATLRMEAELHPNIATVRLSPLG
VKLLNALSQPYVRSRTELDDIADADGWRVAKIPVGTTSWHAAAELLRLGPEAEVLEPAELRATIAEMTRAMAGRYATALT
S

Sequences:

>Translated_321_residues
MLSILTTLQAKGRVTAPELAEACEVSVRTIYRDIDALAASGVPVYADRGAEGGYRLLDGYRVRLNGLSQSEAGALFLAGL
PGPAAALGLDAAMIAAQNKLMAALPANLREDAGRMQERFYLDAPGWFGETEEPKHLRAVAAAVLRGTLIKIRYESWRGQK
RRRVAPLGLVLKGGSWYLAGQVDGSVRTYRIARVLDCTPLDDRFTRPADFDLAAYWQSATLRMEAELHPNIATVRLSPLG
VKLLNALSQPYVRSRTELDDIADADGWRVAKIPVGTTSWHAAAELLRLGPEAEVLEPAELRATIAEMTRAMAGRYATALT
S
>Mature_321_residues
MLSILTTLQAKGRVTAPELAEACEVSVRTIYRDIDALAASGVPVYADRGAEGGYRLLDGYRVRLNGLSQSEAGALFLAGL
PGPAAALGLDAAMIAAQNKLMAALPANLREDAGRMQERFYLDAPGWFGETEEPKHLRAVAAAVLRGTLIKIRYESWRGQK
RRRVAPLGLVLKGGSWYLAGQVDGSVRTYRIARVLDCTPLDDRFTRPADFDLAAYWQSATLRMEAELHPNIATVRLSPLG
VKLLNALSQPYVRSRTELDDIADADGWRVAKIPVGTTSWHAAAELLRLGPEAEVLEPAELRATIAEMTRAMAGRYATALT
S

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 34857; Mature: 34857

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSILTTLQAKGRVTAPELAEACEVSVRTIYRDIDALAASGVPVYADRGAEGGYRLLDGY
CCCCEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCE
RVRLNGLSQSEAGALFLAGLPGPAAALGLDAAMIAAQNKLMAALPANLREDAGRMQERFY
EEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHEEE
LDAPGWFGETEEPKHLRAVAAAVLRGTLIKIRYESWRGQKRRRVAPLGLVLKGGSWYLAG
EECCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEE
QVDGSVRTYRIARVLDCTPLDDRFTRPADFDLAAYWQSATLRMEAELHPNIATVRLSPLG
EECCCEEEEEEEEHEECCCCCHHCCCCCCCCHHHHHCCCEEEEEEEECCCEEEEEECHHH
VKLLNALSQPYVRSRTELDDIADADGWRVAKIPVGTTSWHAAAELLRLGPEAEVLEPAEL
HHHHHHHCCCHHHCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHH
RATIAEMTRAMAGRYATALTS
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSILTTLQAKGRVTAPELAEACEVSVRTIYRDIDALAASGVPVYADRGAEGGYRLLDGY
CCCCEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCE
RVRLNGLSQSEAGALFLAGLPGPAAALGLDAAMIAAQNKLMAALPANLREDAGRMQERFY
EEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHEEE
LDAPGWFGETEEPKHLRAVAAAVLRGTLIKIRYESWRGQKRRRVAPLGLVLKGGSWYLAG
EECCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEE
QVDGSVRTYRIARVLDCTPLDDRFTRPADFDLAAYWQSATLRMEAELHPNIATVRLSPLG
EECCCEEEEEEEEHEECCCCCHHCCCCCCCCHHHHHCCCEEEEEEEECCCEEEEEECHHH
VKLLNALSQPYVRSRTELDDIADADGWRVAKIPVGTTSWHAAAELLRLGPEAEVLEPAEL
HHHHHHHCCCHHHCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHH
RATIAEMTRAMAGRYATALTS
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]