| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290866
Identifier: 192290866
GI number: 192290866
Start: 2677695
End: 2678006
Strand: Reverse
Name: 192290866
Synonym: Rpal_2482
Alternate gene names: NA
Gene position: 2678006-2677695 (Counterclockwise)
Preceding gene: 192290867
Following gene: 192290859
Centisome position: 46.62
GC content: 68.91
Gene sequence:
>312_bases ATGACTGCTTCAGCTAACGACTTCGCCCGCCGCTCCAGACTATCCGCCGCCGCCCTCGTCGCGGCCGCGACGCTGTGCTC GACCGTGATGACGAGTCCGGCATCGGCGCAAGGCACACCGCAGGAGCGTCGCGCCTGCAGGCCCGACGTGATGCGGCTGT GCCGCCCCGAGATCCCCAACGTGCCGCGCATCACCGCCTGCCTGATCGCCAAGCGCACCCAACTCAGCGCTGCCTGCGCG AAGGTGATGTTCCCGAGCCGCCGTAGCGATGCGTCGTCCCCCGTCGCAAGCCGTTCGGTCGTGACGCAATAG
Upstream 100 bases:
>100_bases AGATCGCGCCGGACATCGCCCCCGCCGAAGCACCGTCACTGCTGGCGCGCAGCATCGTCGCAACCTTTCTGCATTCCCCC ACCTCGTGAAGGACTAGACC
Downstream 100 bases:
>100_bases GCAGCGTCAGCTCCGCTGCAGCCAGCGCAGCGCGCCTCGCCCTGCTTCGGCGCCGGTGGCGAAACAGGCGGTGAGCAGAT AGCCGCCGGTCGGCGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTASANDFARRSRLSAAALVAAATLCSTVMTSPASAQGTPQERRACRPDVMRLCRPEIPNVPRITACLIAKRTQLSAACA KVMFPSRRSDASSPVASRSVVTQ
Sequences:
>Translated_103_residues MTASANDFARRSRLSAAALVAAATLCSTVMTSPASAQGTPQERRACRPDVMRLCRPEIPNVPRITACLIAKRTQLSAACA KVMFPSRRSDASSPVASRSVVTQ >Mature_102_residues TASANDFARRSRLSAAALVAAATLCSTVMTSPASAQGTPQERRACRPDVMRLCRPEIPNVPRITACLIAKRTQLSAACAK VMFPSRRSDASSPVASRSVVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10921; Mature: 10790
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASANDFARRSRLSAAALVAAATLCSTVMTSPASAQGTPQERRACRPDVMRLCRPEIPN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHCCCCCC VPRITACLIAKRTQLSAACAKVMFPSRRSDASSPVASRSVVTQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TASANDFARRSRLSAAALVAAATLCSTVMTSPASAQGTPQERRACRPDVMRLCRPEIPN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHCCCCCC VPRITACLIAKRTQLSAACAKVMFPSRRSDASSPVASRSVVTQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA