| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is zraS [C]
Identifier: 192290811
GI number: 192290811
Start: 2614905
End: 2617028
Strand: Reverse
Name: zraS [C]
Synonym: Rpal_2427
Alternate gene names: 192290811
Gene position: 2617028-2614905 (Counterclockwise)
Preceding gene: 192290824
Following gene: 192290806
Centisome position: 45.56
GC content: 65.54
Gene sequence:
>2124_bases ATGCTGACCGCCCAACGTGATTCGCTGCGGTTGCTCCGCGCAATCCTGGTCGCATCCGTGGTGCTGCCGATCGCGCTGTT CAGCTATGCCTCGTGGCTGGCGTATCGCACCAACGAAGCCAACGCCGATCGCCAGATCGACAAGACCCGCGACATCATCA CCGAGCACGCACTGAAGATCTTCGAGTCGGTGCAGCGCTCGATCGCGGAGACCGCCGAAATCGTGCGCGGCATGTCGGAC GACGAGATCCGTGCGAACGAACCGGCCCTGCATGAGCGACTGAAGCGGCTGGTCGGCGGGTCCGAGCAGATCAAGTCGAT GTGGATCTTCGACAAGACCGGGCGACCGCTGGTCAACACGATGCAGTTCCCGTCGCCGACGCCCGACCTGTCCGATCGCG ATTATTTCCGGATCCATCTCGGCAAGAACACCGGGCTCTATGTCGGCCGGGTGCTGCAGCCGCGTCCGCCATTCGATGGC GCTCCGTTCTTCAGTGTGAGCCGACGTCGCGATGCGTCGGACGGCAGTTTCGCCGGGGTGATCCAGACATCCGTCCTGCC GGACTACTTCGAGGGCTTCTACGCCAAGGTCGGCCGTGAGGATGGCAGCTTCGCTTCGCTGGTCCGCGAGGACGGCGCGA TCCTCGCCCGGATGCCGGAAATCGACGGCACCGACACCGCCGTGAAGCCGGACGGCATCGTCGGCCAGGCGATCCGCGAA GGCCACAGCGAGGGGCGGATGACCACGGTGTCGTCGCTCGACGGCGTCGAACGCCGCGTCGCATTTCGCAAGCTGCCCAG TCTGCCGGTCTATGTGTTCGCCGGCCTGGAGACGAGCGCGATCCGCGCGACGTGGCTGGCGCAGATGGGCGCCTATCTGC TGGTCGGCCTGCCCGCCACTGCCGCGCTGATCGCGATCGTGCTGCTGGCGATACGGCGGACACAAAAGCTCTATGAAGAA GCCGACCGCCGCCACATCGCCGAGAATGCGCTGAAGCAGTCGCAGCGGCTGGAGTCGCTCGGCCGCCTCACCGGCGGCGT CGCGCATGACTTCAACAACCTGCTGATGGTCGTCGGCGGCTCGGTGCAGAGGCTGCGGCGCCGGCACAGCAACCTGCAGG ACATCCGCAGCTTCGACATGATCGACTCCGCCGTCGCAAAGGGTACGGCGCTGACCCGGCAATTGCTATCGTTCTCGCGC CGGCACAACGTCGCGGCCAAAGCGGTCGACCTCGGCGACGCCGTGACGAAGTTCGCCGACGTGCTGAGGCAATCGGTGCG CAGCGACATCGGCATCATGATCGACCCGCCGGCCGAGCCGGTGGTGGTGATGATCGATCCCAACGAGTTCGAGATCGCGC TGCTCAACCTTGCGCTCAACGCACGCGACGCGATGCCCGACGGCGGCCGGATCACCATCTCGATCCGCACCGAAACGCTG AAGAACTTCGGCCCCCGCAAGCTCACCGGCACCTACGCCATTCTGTCGTTTGCCGACACTGGTGTCGGCATCCCGGACGA CATTCGCGAGCGGATTTTCGAGCCGTTCTTCACCACCAAGCCGGTCGACCGCGGCACTGGTCTCGGCCTCAGCCAGATCT ACGGCTTCGTGCAGCAATCGAGCGGCGCGATTACCGTCGACAGCGACCTAGGCCGGGGCACGCGGTTTGATTTGTTCCTG CCGCTCTCGGCCGAAGCGCTCGGCCTAGACGAGCCCACGGCGGAGCTGGCCCCGCCGCAATCCGGAAAGCCAAAGACGCT GTTGCTGGTGGAAGATCATCCCGATGTCGCCTCGGTCGCGGCCGACTATGCGGGGCAATGCGGCTTCACCGTGGTGCCGG CGAACTGCGCCGAGGCAGCGGTCGAAGTGCTCAATCGCCGGAGAGACATCGATCTGGTGTTCAGCGACATCGTCATGCCC GGCATGAGCGGGCTCGAACTGGCTCGCCTGATCCGCGAGCATCATCCGGAAACCCCGGTGGTACTCGCCTCAGGCTACAG CGACCGCTCGGCGTCAGCGCTCAGCGAGGGCTTTGCATTGCTGCAGAAGCCCTACACCCTCGACGAGATGCGGGCGGCGC TGACCCAAGCGCTGCAAGGCGCCTCCGACACAGCGCCGGTCTAA
Upstream 100 bases:
>100_bases GTTCCCGCCACGCCTCGGCGGCCCGTGATTGCGGCAGTTTTCCTTGGTCCCGAAAGGTGCATAATCGAGGATACATGGCC GCTTCGGACTTCCAACGCTC
Downstream 100 bases:
>100_bases ACTTTACCCTTAAACTTTACCCGATTGATCGATCGGGCGGGGGCGCAGTTGCAGCCCCGCCCGATCGCATGACTACCAAT GACGGTGGTGGTGCCAGTGG
Product: integral membrane sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MLTAQRDSLRLLRAILVASVVLPIALFSYASWLAYRTNEANADRQIDKTRDIITEHALKIFESVQRSIAETAEIVRGMSD DEIRANEPALHERLKRLVGGSEQIKSMWIFDKTGRPLVNTMQFPSPTPDLSDRDYFRIHLGKNTGLYVGRVLQPRPPFDG APFFSVSRRRDASDGSFAGVIQTSVLPDYFEGFYAKVGREDGSFASLVREDGAILARMPEIDGTDTAVKPDGIVGQAIRE GHSEGRMTTVSSLDGVERRVAFRKLPSLPVYVFAGLETSAIRATWLAQMGAYLLVGLPATAALIAIVLLAIRRTQKLYEE ADRRHIAENALKQSQRLESLGRLTGGVAHDFNNLLMVVGGSVQRLRRRHSNLQDIRSFDMIDSAVAKGTALTRQLLSFSR RHNVAAKAVDLGDAVTKFADVLRQSVRSDIGIMIDPPAEPVVVMIDPNEFEIALLNLALNARDAMPDGGRITISIRTETL KNFGPRKLTGTYAILSFADTGVGIPDDIRERIFEPFFTTKPVDRGTGLGLSQIYGFVQQSSGAITVDSDLGRGTRFDLFL PLSAEALGLDEPTAELAPPQSGKPKTLLLVEDHPDVASVAADYAGQCGFTVVPANCAEAAVEVLNRRRDIDLVFSDIVMP GMSGLELARLIREHHPETPVVLASGYSDRSASALSEGFALLQKPYTLDEMRAALTQALQGASDTAPV
Sequences:
>Translated_707_residues MLTAQRDSLRLLRAILVASVVLPIALFSYASWLAYRTNEANADRQIDKTRDIITEHALKIFESVQRSIAETAEIVRGMSD DEIRANEPALHERLKRLVGGSEQIKSMWIFDKTGRPLVNTMQFPSPTPDLSDRDYFRIHLGKNTGLYVGRVLQPRPPFDG APFFSVSRRRDASDGSFAGVIQTSVLPDYFEGFYAKVGREDGSFASLVREDGAILARMPEIDGTDTAVKPDGIVGQAIRE GHSEGRMTTVSSLDGVERRVAFRKLPSLPVYVFAGLETSAIRATWLAQMGAYLLVGLPATAALIAIVLLAIRRTQKLYEE ADRRHIAENALKQSQRLESLGRLTGGVAHDFNNLLMVVGGSVQRLRRRHSNLQDIRSFDMIDSAVAKGTALTRQLLSFSR RHNVAAKAVDLGDAVTKFADVLRQSVRSDIGIMIDPPAEPVVVMIDPNEFEIALLNLALNARDAMPDGGRITISIRTETL KNFGPRKLTGTYAILSFADTGVGIPDDIRERIFEPFFTTKPVDRGTGLGLSQIYGFVQQSSGAITVDSDLGRGTRFDLFL PLSAEALGLDEPTAELAPPQSGKPKTLLLVEDHPDVASVAADYAGQCGFTVVPANCAEAAVEVLNRRRDIDLVFSDIVMP GMSGLELARLIREHHPETPVVLASGYSDRSASALSEGFALLQKPYTLDEMRAALTQALQGASDTAPV >Mature_707_residues MLTAQRDSLRLLRAILVASVVLPIALFSYASWLAYRTNEANADRQIDKTRDIITEHALKIFESVQRSIAETAEIVRGMSD DEIRANEPALHERLKRLVGGSEQIKSMWIFDKTGRPLVNTMQFPSPTPDLSDRDYFRIHLGKNTGLYVGRVLQPRPPFDG APFFSVSRRRDASDGSFAGVIQTSVLPDYFEGFYAKVGREDGSFASLVREDGAILARMPEIDGTDTAVKPDGIVGQAIRE GHSEGRMTTVSSLDGVERRVAFRKLPSLPVYVFAGLETSAIRATWLAQMGAYLLVGLPATAALIAIVLLAIRRTQKLYEE ADRRHIAENALKQSQRLESLGRLTGGVAHDFNNLLMVVGGSVQRLRRRHSNLQDIRSFDMIDSAVAKGTALTRQLLSFSR RHNVAAKAVDLGDAVTKFADVLRQSVRSDIGIMIDPPAEPVVVMIDPNEFEIALLNLALNARDAMPDGGRITISIRTETL KNFGPRKLTGTYAILSFADTGVGIPDDIRERIFEPFFTTKPVDRGTGLGLSQIYGFVQQSSGAITVDSDLGRGTRFDLFL PLSAEALGLDEPTAELAPPQSGKPKTLLLVEDHPDVASVAADYAGQCGFTVVPANCAEAAVEVLNRRRDIDLVFSDIVMP GMSGLELARLIREHHPETPVVLASGYSDRSASALSEGFALLQKPYTLDEMRAALTQALQGASDTAPV
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=263, Percent_Identity=28.8973384030418, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1788549, Length=253, Percent_Identity=29.6442687747036, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788713, Length=272, Percent_Identity=26.8382352941176, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI48994928, Length=222, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 77197; Mature: 77197
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAQRDSLRLLRAILVASVVLPIALFSYASWLAYRTNEANADRQIDKTRDIITEHALKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH FESVQRSIAETAEIVRGMSDDEIRANEPALHERLKRLVGGSEQIKSMWIFDKTGRPLVNT HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHH MQFPSPTPDLSDRDYFRIHLGKNTGLYVGRVLQPRPPFDGAPFFSVSRRRDASDGSFAGV CCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH IQTSVLPDYFEGFYAKVGREDGSFASLVREDGAILARMPEIDGTDTAVKPDGIVGQAIRE HHHHHCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHC GHSEGRMTTVSSLDGVERRVAFRKLPSLPVYVFAGLETSAIRATWLAQMGAYLLVGLPAT CCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEECCHH AALIAIVLLAIRRTQKLYEEADRRHIAENALKQSQRLESLGRLTGGVAHDFNNLLMVVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEEECC SVQRLRRRHSNLQDIRSFDMIDSAVAKGTALTRQLLSFSRRHNVAAKAVDLGDAVTKFAD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VLRQSVRSDIGIMIDPPAEPVVVMIDPNEFEIALLNLALNARDAMPDGGRITISIRTETL HHHHHHHCCCCEEECCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEEEHHHH KNFGPRKLTGTYAILSFADTGVGIPDDIRERIFEPFFTTKPVDRGTGLGLSQIYGFVQQS HCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHCC SGAITVDSDLGRGTRFDLFLPLSAEALGLDEPTAELAPPQSGKPKTLLLVEDHPDVASVA CCCEEEECCCCCCCEEEEEEECCHHHCCCCCCCHHCCCCCCCCCCEEEEEECCCCHHHHH ADYAGQCGFTVVPANCAEAAVEVLNRRRDIDLVFSDIVMPGMSGLELARLIREHHPETPV HHHCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCE VLASGYSDRSASALSEGFALLQKPYTLDEMRAALTQALQGASDTAPV EEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLTAQRDSLRLLRAILVASVVLPIALFSYASWLAYRTNEANADRQIDKTRDIITEHALKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH FESVQRSIAETAEIVRGMSDDEIRANEPALHERLKRLVGGSEQIKSMWIFDKTGRPLVNT HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHH MQFPSPTPDLSDRDYFRIHLGKNTGLYVGRVLQPRPPFDGAPFFSVSRRRDASDGSFAGV CCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH IQTSVLPDYFEGFYAKVGREDGSFASLVREDGAILARMPEIDGTDTAVKPDGIVGQAIRE HHHHHCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHC GHSEGRMTTVSSLDGVERRVAFRKLPSLPVYVFAGLETSAIRATWLAQMGAYLLVGLPAT CCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEECCHH AALIAIVLLAIRRTQKLYEEADRRHIAENALKQSQRLESLGRLTGGVAHDFNNLLMVVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEEECC SVQRLRRRHSNLQDIRSFDMIDSAVAKGTALTRQLLSFSRRHNVAAKAVDLGDAVTKFAD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VLRQSVRSDIGIMIDPPAEPVVVMIDPNEFEIALLNLALNARDAMPDGGRITISIRTETL HHHHHHHCCCCEEECCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEEEHHHH KNFGPRKLTGTYAILSFADTGVGIPDDIRERIFEPFFTTKPVDRGTGLGLSQIYGFVQQS HCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHCC SGAITVDSDLGRGTRFDLFLPLSAEALGLDEPTAELAPPQSGKPKTLLLVEDHPDVASVA CCCEEEECCCCCCCEEEEEEECCHHHCCCCCCCHHCCCCCCCCCCEEEEEECCCCHHHHH ADYAGQCGFTVVPANCAEAAVEVLNRRRDIDLVFSDIVMPGMSGLELARLIREHHPETPV HHHCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCE VLASGYSDRSASALSEGFALLQKPYTLDEMRAALTQALQGASDTAPV EEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA