| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290805
Identifier: 192290805
GI number: 192290805
Start: 2609090
End: 2609311
Strand: Reverse
Name: 192290805
Synonym: Rpal_2421
Alternate gene names: NA
Gene position: 2609311-2609090 (Counterclockwise)
Preceding gene: 192290806
Following gene: 192290796
Centisome position: 45.43
GC content: 65.32
Gene sequence:
>222_bases ATGTCCGACGCCTGCGTCATCGAAGTTCGCGCCCGCACCGCCGGGATCCTCGTCCGCGAAGGAGACAGCTACTGCTTCTT CGCCGCGCACCACGACTTCCACGCGTTGGAACGCCAATCGTTCGATTCGCTGATGGCCGCACAGGCGGCTGCGAGCCGCT GCGCCAATGGCGCTTCAGAGATCCGTGTCGATCCCCCGCGCACGGCGTCTCACCGAACATAG
Upstream 100 bases:
>100_bases GAAGCGTCACGATTGAACAGCCACGCGATCGATGGCGCCGCCTTCCACCGCCGCGCCCTCGAGACTATAGGAAGGCACCG GCAAAGTCCGGTGACATGCA
Downstream 100 bases:
>100_bases TTGGCGCGACGCCGATCACGTTCAGCCACGACGGCGCGTACGCTCCGAGCCCATGCCGAGGCGGCCGCTTTCCGCCAGTT CGCGCAGGCGGTGCCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MSDACVIEVRARTAGILVREGDSYCFFAAHHDFHALERQSFDSLMAAQAAASRCANGASEIRVDPPRTASHRT
Sequences:
>Translated_73_residues MSDACVIEVRARTAGILVREGDSYCFFAAHHDFHALERQSFDSLMAAQAAASRCANGASEIRVDPPRTASHRT >Mature_72_residues SDACVIEVRARTAGILVREGDSYCFFAAHHDFHALERQSFDSLMAAQAAASRCANGASEIRVDPPRTASHRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7951; Mature: 7820
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDACVIEVRARTAGILVREGDSYCFFAAHHDFHALERQSFDSLMAAQAAASRCANGASE CCCCEEEEEECCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC IRVDPPRTASHRT EEECCCCCCCCCC >Mature Secondary Structure SDACVIEVRARTAGILVREGDSYCFFAAHHDFHALERQSFDSLMAAQAAASRCANGASE CCCEEEEEECCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC IRVDPPRTASHRT EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA