| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is hmuT [H]
Identifier: 192290795
GI number: 192290795
Start: 2599281
End: 2600252
Strand: Reverse
Name: hmuT [H]
Synonym: Rpal_2411
Alternate gene names: 192290795
Gene position: 2600252-2599281 (Counterclockwise)
Preceding gene: 192290796
Following gene: 192290794
Centisome position: 45.27
GC content: 66.26
Gene sequence:
>972_bases ATGATCGCGATCGCTCACGTTAAACGCCGCCGCGCCGCCCTGTTCGCCGCGACGCTACTCGCTGGTTCCTTCTCGCTGCC GGCCATCGCCGCCGAGATCAAGGTGCGCGACGCGCACGGCCGCGACGTCACCGTTGCGGATTCCTCACGCACGCTGTCGA TCGGCGGCGCGATCACCGAGGTGCTGGCCGATCTCGGCCTGGCGCAGCGGATCGCGGGCGTCGATTCCACCAGCGTGTAT CCGCCTGAGGCCGTCGCCGGAAAGCCCAATGTCGGTTACTTGCGACAACTATCGTCGGAAGGCGTGATCGGCCTGAACCC GACGCTGATCCTGGCGATGGATTCGGCCGGTCCGAAGCAGACGATCGATGCGATCACTTCGGCCGGCATTCCGCTGGTGT CGGTGCAGGAGGCTTATTCCGAACAAGGCCTGCTCGACAAGATCGCGCTGATCGGCCACGCCATGGGCGCCGACAAGGCC GCGACGTGTCTTGCCTCCGCGGTCGGCGACGACTTCACCACGCTGCGCAAGCTGCGCGCGGCGATCACCAAGCCGGTACG CGTGATGTTCGTGATGTCGCTCGTCAACGGCCAGGCGATGGCGGCTGGACGGAACACCGCGGCGGATTCGATCATTGCGC TCGCCGGCGGCGTCAACGCGATCGATGGCTACGACGGCTACAAGGCGATCAACGACGAGGCGATCGTCGCAGCACGTCCC GATGTCGTGCTGACGATCAAGCGCAGCCGCGATTCCTTCGAGGCCGACGCGTTTTACGCCCATCCGGCGTTCTCGCTGAC GCCAGCCGGCCAGCACCGTGCCTTCCTGGCGATGGACGGACTATACCTGCTCGGCTTCGGGCCGCGCACGCCGGCTGCGG CAGTCGAGGTCGCATCGAAACTGTATCCGCAGCTCGCAGCCGAGGCCGCCGGCTTCAAGCCGAAAGCCACCACGGTCGAT TGCCGCTCATGA
Upstream 100 bases:
>100_bases GCCGCGAACTGTTCACGGTGGATCGGGAAATCGTGATCGCGCATGGCGACGATCGCTACCGCCTTCGCCTCACCTCGCAG AACAAGCTGATCCTGACCAA
Downstream 100 bases:
>100_bases GCGTGCTGGCGCTTCCCCGCCGCAGCCGCGCCGGCGCGCCGCGCCCCGGAGCCGCGATCACGCTCACCGTGCTCGGCGGA TTGCTGATCGCCGCGATGGC
Product: hemin ABC transporter periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MIAIAHVKRRRAALFAATLLAGSFSLPAIAAEIKVRDAHGRDVTVADSSRTLSIGGAITEVLADLGLAQRIAGVDSTSVY PPEAVAGKPNVGYLRQLSSEGVIGLNPTLILAMDSAGPKQTIDAITSAGIPLVSVQEAYSEQGLLDKIALIGHAMGADKA ATCLASAVGDDFTTLRKLRAAITKPVRVMFVMSLVNGQAMAAGRNTAADSIIALAGGVNAIDGYDGYKAINDEAIVAARP DVVLTIKRSRDSFEADAFYAHPAFSLTPAGQHRAFLAMDGLYLLGFGPRTPAAAVEVASKLYPQLAAEAAGFKPKATTVD CRS
Sequences:
>Translated_323_residues MIAIAHVKRRRAALFAATLLAGSFSLPAIAAEIKVRDAHGRDVTVADSSRTLSIGGAITEVLADLGLAQRIAGVDSTSVY PPEAVAGKPNVGYLRQLSSEGVIGLNPTLILAMDSAGPKQTIDAITSAGIPLVSVQEAYSEQGLLDKIALIGHAMGADKA ATCLASAVGDDFTTLRKLRAAITKPVRVMFVMSLVNGQAMAAGRNTAADSIIALAGGVNAIDGYDGYKAINDEAIVAARP DVVLTIKRSRDSFEADAFYAHPAFSLTPAGQHRAFLAMDGLYLLGFGPRTPAAAVEVASKLYPQLAAEAAGFKPKATTVD CRS >Mature_323_residues MIAIAHVKRRRAALFAATLLAGSFSLPAIAAEIKVRDAHGRDVTVADSSRTLSIGGAITEVLADLGLAQRIAGVDSTSVY PPEAVAGKPNVGYLRQLSSEGVIGLNPTLILAMDSAGPKQTIDAITSAGIPLVSVQEAYSEQGLLDKIALIGHAMGADKA ATCLASAVGDDFTTLRKLRAAITKPVRVMFVMSLVNGQAMAAGRNTAADSIIALAGGVNAIDGYDGYKAINDEAIVAARP DVVLTIKRSRDSFEADAFYAHPAFSLTPAGQHRAFLAMDGLYLLGFGPRTPAAAVEVASKLYPQLAAEAAGFKPKATTVD CRS
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 33447; Mature: 33447
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIAHVKRRRAALFAATLLAGSFSLPAIAAEIKVRDAHGRDVTVADSSRTLSIGGAITE CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCEEEECHHHHH VLADLGLAQRIAGVDSTSVYPPEAVAGKPNVGYLRQLSSEGVIGLNPTLILAMDSAGPKQ HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHCCCCEEECCCEEEEEECCCCCHH TIDAITSAGIPLVSVQEAYSEQGLLDKIALIGHAMGADKAATCLASAVGDDFTTLRKLRA HHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH AITKPVRVMFVMSLVNGQAMAAGRNTAADSIIALAGGVNAIDGYDGYKAINDEAIVAARP HHCCHHHHHHHHHHHCCCEEECCCCCHHHHHEEEECCCCCCCCCCCCEECCCCEEEEECC DVVLTIKRSRDSFEADAFYAHPAFSLTPAGQHRAFLAMDGLYLLGFGPRTPAAAVEVASK CEEEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHH LYPQLAAEAAGFKPKATTVDCRS HHHHHHHHHCCCCCCCCEECCCC >Mature Secondary Structure MIAIAHVKRRRAALFAATLLAGSFSLPAIAAEIKVRDAHGRDVTVADSSRTLSIGGAITE CEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCEEEECHHHHH VLADLGLAQRIAGVDSTSVYPPEAVAGKPNVGYLRQLSSEGVIGLNPTLILAMDSAGPKQ HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHCCCCEEECCCEEEEEECCCCCHH TIDAITSAGIPLVSVQEAYSEQGLLDKIALIGHAMGADKAATCLASAVGDDFTTLRKLRA HHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH AITKPVRVMFVMSLVNGQAMAAGRNTAADSIIALAGGVNAIDGYDGYKAINDEAIVAARP HHCCHHHHHHHHHHHCCCEEECCCCCHHHHHEEEECCCCCCCCCCCCEECCCCEEEEECC DVVLTIKRSRDSFEADAFYAHPAFSLTPAGQHRAFLAMDGLYLLGFGPRTPAAAVEVASK CEEEEEECCCCCCCCCEEEECCCEEECCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHH LYPQLAAEAAGFKPKATTVDCRS HHHHHHHHHCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]