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The map label for this gene is ifcA [H]

Identifier: 192290767

GI number: 192290767

Start: 2566551

End: 2567855

Strand: Reverse

Name: ifcA [H]

Synonym: Rpal_2383

Alternate gene names: 192290767

Gene position: 2567855-2566551 (Counterclockwise)

Preceding gene: 192290773

Following gene: 192290766

Centisome position: 44.7

GC content: 67.82

Gene sequence:

>1305_bases
GTGACGGTGATAGGCGGCGGAATCGCCGGTCTTTGCGCAGCAATTGCCGCGCGCCGGGGCGGCGCTGCGGTGCGCCTGCT
CGAAGCGGCACCGCGGCCCTTGCGCGGCGGCAATGCGCGCCACGGTCGCAATTTCCGGCTCACACACGAGATGCCGCTCG
ACTACGTCCCCGACCGCTACACGGCGGAAGAATTGCGCGCCGAGCTGCGCAGCGTGACGGGCGACGACACTAACCGGGCG
CTGACGGAGCTACTGATTGAACGCGCGCACAGCATCGCCGGCTGGCTGATCGACCACGGCGTGCACCTGCAGCCACCAGG
CACCGGGGTGATGCCGTATTCCCGACGCACCGCGTTTCCGCTCGGTGGCGGCAAGGCGATGATCAATGCGTTGTACGCAT
CTGCCGAGCGGTTAGGCATCGCAATCAACTACGACAGCGAGGTCCGATCGATTCTCCGCAGCGAGGGCGGCGGCTGGACC
ATCAACGTGCGTAGCGCCGGCGCTGACGACCCAATCCGCACGCGCAGTGTCGTCGTCTGCGCCGGTGGCGCGGGCGCCGA
CCCGGCGTGGCTGCGCGCCAATTTCGGCAGCACTGCCGAGGGCTGGATGGTCCGCGGCACGCCTTATGCCAACGGCCACC
TGCTCGATCTGCTGATCGGGGCCGGCGGCTGTGCGATCGGCGATCCGACTACATGCCATGTCGTTCCGGTCGATGCGCGC
GGGCCGCAGTTCGACGGCGGCATCGTCACTCGAATCACATCCATTCCGCTCGGCCTCGTGATCGACCGATCCAGCGCGCG
CATCGACGTCGCAGGGGCCGGATCGCAGCCGACGCACTACGCCAAATGGGGACCAAGGATCGCAGACTGTCCCGGCCAAC
TCGCTTATCTACTGCTCGATGCCCGAGGGCTCGCACGCGCCGCGCCGTCGGCTCTGGCACCGATCACCGCGCCGAGCCTC
GGCGAATTGGCCGCCGCGCTCGCGATTGATCCGGCCGCATTGTTGCAGAACATTGACGACTTCAATGCCGCGCCAGCCAA
CGCCGTGCGCACCATCGCAGTGCCGCCATTCTTCGCCTATCCGATGCGGCCAGGGCTGACGTTCGTGCACTACGGCATCA
AGGTCGACGCCACGATGCGGGTAGTCCAGGCAGACGGACGCCGTCACGACGATCTGTTCGCGGCCGGTATGATCATGGCC
GCGAACGTACTGCGCCGCGGCTATCTCGCCGGGCTCGGCATCACCCTGTCGGCGGTGTTCGGCCAGATCGCCGGCGAGGA
GGCAGCGCGCCATGCCCACGGCTGA

Upstream 100 bases:

>100_bases
CCTCTAAGACGAAGGTCCACCAGGCCGCGCTTTCCCTCGCCGCTATCGAGCGGCCCAGGCGCATCATCTCGACCGGATTG
ACCGCATCTTGCTGTGGGAT

Downstream 100 bases:

>100_bases
TCCGATGCTCGAGGCCGAGCGCGTGCTGCGGATCTGCAGCGCCTGCATGTATTGCGACGGGCTTTGCCCGGTGTTTCCGG
CGATCGACGGCAAACATGGC

Product: tricarballylate dehydrogenase

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTVIGGGIAGLCAAIAARRGGAAVRLLEAAPRPLRGGNARHGRNFRLTHEMPLDYVPDRYTAEELRAELRSVTGDDTNRA
LTELLIERAHSIAGWLIDHGVHLQPPGTGVMPYSRRTAFPLGGGKAMINALYASAERLGIAINYDSEVRSILRSEGGGWT
INVRSAGADDPIRTRSVVVCAGGAGADPAWLRANFGSTAEGWMVRGTPYANGHLLDLLIGAGGCAIGDPTTCHVVPVDAR
GPQFDGGIVTRITSIPLGLVIDRSSARIDVAGAGSQPTHYAKWGPRIADCPGQLAYLLLDARGLARAAPSALAPITAPSL
GELAAALAIDPAALLQNIDDFNAAPANAVRTIAVPPFFAYPMRPGLTFVHYGIKVDATMRVVQADGRRHDDLFAAGMIMA
ANVLRRGYLAGLGITLSAVFGQIAGEEAARHAHG

Sequences:

>Translated_434_residues
MTVIGGGIAGLCAAIAARRGGAAVRLLEAAPRPLRGGNARHGRNFRLTHEMPLDYVPDRYTAEELRAELRSVTGDDTNRA
LTELLIERAHSIAGWLIDHGVHLQPPGTGVMPYSRRTAFPLGGGKAMINALYASAERLGIAINYDSEVRSILRSEGGGWT
INVRSAGADDPIRTRSVVVCAGGAGADPAWLRANFGSTAEGWMVRGTPYANGHLLDLLIGAGGCAIGDPTTCHVVPVDAR
GPQFDGGIVTRITSIPLGLVIDRSSARIDVAGAGSQPTHYAKWGPRIADCPGQLAYLLLDARGLARAAPSALAPITAPSL
GELAAALAIDPAALLQNIDDFNAAPANAVRTIAVPPFFAYPMRPGLTFVHYGIKVDATMRVVQADGRRHDDLFAAGMIMA
ANVLRRGYLAGLGITLSAVFGQIAGEEAARHAHG
>Mature_433_residues
TVIGGGIAGLCAAIAARRGGAAVRLLEAAPRPLRGGNARHGRNFRLTHEMPLDYVPDRYTAEELRAELRSVTGDDTNRAL
TELLIERAHSIAGWLIDHGVHLQPPGTGVMPYSRRTAFPLGGGKAMINALYASAERLGIAINYDSEVRSILRSEGGGWTI
NVRSAGADDPIRTRSVVVCAGGAGADPAWLRANFGSTAEGWMVRGTPYANGHLLDLLIGAGGCAIGDPTTCHVVPVDARG
PQFDGGIVTRITSIPLGLVIDRSSARIDVAGAGSQPTHYAKWGPRIADCPGQLAYLLLDARGLARAAPSALAPITAPSLG
ELAAALAIDPAALLQNIDDFNAAPANAVRTIAVPPFFAYPMRPGLTFVHYGIKVDATMRVVQADGRRHDDLFAAGMIMAA
NVLRRGYLAGLGITLSAVFGQIAGEEAARHAHG

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 45426; Mature: 45294

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIGGGIAGLCAAIAARRGGAAVRLLEAAPRPLRGGNARHGRNFRLTHEMPLDYVPDRY
CEEECCCHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
TAEELRAELRSVTGDDTNRALTELLIERAHSIAGWLIDHGVHLQPPGTGVMPYSRRTAFP
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
LGGGKAMINALYASAERLGIAINYDSEVRSILRSEGGGWTINVRSAGADDPIRTRSVVVC
CCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEE
AGGAGADPAWLRANFGSTAEGWMVRGTPYANGHLLDLLIGAGGCAIGDPTTCHVVPVDAR
ECCCCCCCCEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCC
GPQFDGGIVTRITSIPLGLVIDRSSARIDVAGAGSQPTHYAKWGPRIADCPGQLAYLLLD
CCCCCCCCEEEHHHCCEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCHHEEEEEHC
ARGLARAAPSALAPITAPSLGELAAALAIDPAALLQNIDDFNAAPANAVRTIAVPPFFAY
CCHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEECCCCEEC
PMRPGLTFVHYGIKVDATMRVVQADGRRHDDLFAAGMIMAANVLRRGYLAGLGITLSAVF
CCCCCCEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GQIAGEEAARHAHG
HHHHHHHHHHCCCC
>Mature Secondary Structure 
TVIGGGIAGLCAAIAARRGGAAVRLLEAAPRPLRGGNARHGRNFRLTHEMPLDYVPDRY
EEECCCHHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
TAEELRAELRSVTGDDTNRALTELLIERAHSIAGWLIDHGVHLQPPGTGVMPYSRRTAFP
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
LGGGKAMINALYASAERLGIAINYDSEVRSILRSEGGGWTINVRSAGADDPIRTRSVVVC
CCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEE
AGGAGADPAWLRANFGSTAEGWMVRGTPYANGHLLDLLIGAGGCAIGDPTTCHVVPVDAR
ECCCCCCCCEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCC
GPQFDGGIVTRITSIPLGLVIDRSSARIDVAGAGSQPTHYAKWGPRIADCPGQLAYLLLD
CCCCCCCCEEEHHHCCEEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCHHEEEEEHC
ARGLARAAPSALAPITAPSLGELAAALAIDPAALLQNIDDFNAAPANAVRTIAVPPFFAY
CCHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEEECCCCEEC
PMRPGLTFVHYGIKVDATMRVVQADGRRHDDLFAAGMIMAANVLRRGYLAGLGITLSAVF
CCCCCCEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GQIAGEEAARHAHG
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]