Click here to switch to the map view.

The map label for this gene is 192290618

Identifier: 192290618

GI number: 192290618

Start: 2415894

End: 2417852

Strand: Reverse

Name: 192290618

Synonym: Rpal_2227

Alternate gene names: NA

Gene position: 2417852-2415894 (Counterclockwise)

Preceding gene: 192290619

Following gene: 192290606

Centisome position: 42.09

GC content: 64.98

Gene sequence:

>1959_bases
ATGGAACTTCCAAGGCGTGCCCGTGGTGACGAACTCCTGGTTCCCGGCAAGATGGCCAGCTTGCGAGCGCGATTGCGCCG
GCTGTCGGGGCAGCATGACCTGACGACCGTCATCGTCAACGCCTTCGATCATCGCACCCGAGTCCTGCCCTTTGTTCTCG
CAGATACCCGTATGGCGCCCGGCGGCGTCCGGGCGATTGGGGCGGCGCTCGCCGATGTCGGTTTCGACAAGACCCGGATC
GTGCTGCAGCAGTGGAACCGGAACTTCAGCCCGCTGCAAATGCGACTCGACGGCCGGATTCCGGACCTGTTCCTGGTCTC
CAGCATGCATCTGCATTCGGCCGAGTGCGATCGCCTGATTCGCGAGGCCTGCCAGATCGATCCGGACAAGCGCCCCCTGA
TCATGGTCGGCGGTCCCCGCATTCGCTACGAGCCTTGGCATGTGTTTGGCGGCACTCGCGATGCGACATGGTCCGCCGAT
GTCGCCGTCACCGGCGAGGAATACGTCTTCCTCGAACTGCTGGACGTGCTGCTGTCGATGCGCGCGCCCGGCGAGTCGAT
GCGCTCGGTGTTCCAGCGGGCCCGCGATGACGGCGCACTCGACGAGGTGCCGGGGATCGTCTATGCGCGCCGCTCCTCGC
GGAGCGGTCCGATTGAAGAGCTGGTCGATACCGGCGTACAGCGCCTGCTCGGCGATCTCGACGAGCTACCCGACCCGGTG
CACGGCTACAAACTGCTGGAGGCCCCGAGCAACAGTGCGACGCTAGCGAGCCAGGCGCTGCCGATCAACCGGGTGAAGCG
CCATAGCCCGATCGCCAGCATCGTGATGACCGCGGGCTGCAAGTTCCGCTGCTCGTACTGCCCGATCCCGGCCTACAACC
AGTCCCAATTCCGCGCCAAGAGCGGCGAGCGGATCGCCGAGGAGATCGGGCAGATCGCCAGCACCTTCGGCATCTATCAC
TTCTTCGGCGCCGACGATAACTTCTTCAACGACACCAAGCGCACGCTGGACATCGCCGGCACGCTGGCGCGCAAGCGCTC
CGAACGGCCGTTCTGCAAGGTGCGGCTCGGCACCGAAGTCACGGTGCACGACACCGTCGGGATGCGCGATCACCTGCCGC
TGATCCGCGATGCGGGCTTTGCGGCGGTCTGGCTCGGCGTCGAGGATATGACCGCGACGCTGGTGAAGAAGGCGCAGGAC
AAGGACAAGACCCAGCTCGCCTTCAAGCTGCTGCGCGAAAACAACATCCTGCCGATGCCGATGATGATGCATCACGACAG
CCAGCCGTTGGTGACCTGGAAATCGAACTACGGCCTGATCAACCAAATCAGGCTGCTGCGCAAGGCCGGCTCGATCAGCA
CGCAGGTGATGATGCTGACCCCTGCCCCCGGTTCGAAGTGGTACGAGAACGTGTTCGAATCCGGCATGGCGTTCAGCCGC
GCCGGCGACATCAAGGTCGAGCCGCATATCATGGACGGCAACTACGTCGTCGCCTCGAAGCACCCGCGGCCCTGGCTGAA
GCAGCTCAATCTGCTGCTTGCCTACACCTACTTCTTCAATCCGATCCGCTTCCTCAGCGCGCTGGTGTTCTCCAAATCGG
CCGACGTGTTCTCGAGCGCCGAAACCCGCCCCGCCCACGAGGTCGCGCATTTCTCACCGGCCAAGCGAATGCGGCGTCGA
GCCTGGCTGAAGTTCCGCGCCCACATCGTTGATGCTGGCGCGCAGATCTACGGCATGATCGGGCTCGCCCACACCTACCG
GCGAACTGCCGGCTGGGCGTGGCGGCTACTCCGCGGTGACATCGAGCGGCACGACCGCGCCCCGGTCAGCCCGATCCCGA
TGCGGGGCGTCGGCGACAAGCCATCCGATCACGCGCTGCCGGGAACGGTCGATCTACGGGATCTCGAGCAGGTTGCTCTC
CACGGCGCGCCAGCGCCGAAACTGGCGAAGACCGCCTGA

Upstream 100 bases:

>100_bases
GCCCCCATGCGGCGGCCGTCAACTTGACCGATTCCGGTATTAACCGCACAGTGACGAGCGCAAATCAGTTTGCGGTCATC
CACCGGGATCGAGGCAATAC

Downstream 100 bases:

>100_bases
TTGCTGGCCGCCGCGCTAAAACGAGTACTCCATGCCGACCGTGACGCCTTGAAGAAGCGTCGACGAGCGACAATCGACAC
CTGCTGCCGTCACGCTGCTG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Fe-S Oxidoreductase; P-Methyltransferase Related Protein; Methyltransferase Related Protein; Radical SAM Family Protein

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MELPRRARGDELLVPGKMASLRARLRRLSGQHDLTTVIVNAFDHRTRVLPFVLADTRMAPGGVRAIGAALADVGFDKTRI
VLQQWNRNFSPLQMRLDGRIPDLFLVSSMHLHSAECDRLIREACQIDPDKRPLIMVGGPRIRYEPWHVFGGTRDATWSAD
VAVTGEEYVFLELLDVLLSMRAPGESMRSVFQRARDDGALDEVPGIVYARRSSRSGPIEELVDTGVQRLLGDLDELPDPV
HGYKLLEAPSNSATLASQALPINRVKRHSPIASIVMTAGCKFRCSYCPIPAYNQSQFRAKSGERIAEEIGQIASTFGIYH
FFGADDNFFNDTKRTLDIAGTLARKRSERPFCKVRLGTEVTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQD
KDKTQLAFKLLRENNILPMPMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSISTQVMMLTPAPGSKWYENVFESGMAFSR
AGDIKVEPHIMDGNYVVASKHPRPWLKQLNLLLAYTYFFNPIRFLSALVFSKSADVFSSAETRPAHEVAHFSPAKRMRRR
AWLKFRAHIVDAGAQIYGMIGLAHTYRRTAGWAWRLLRGDIERHDRAPVSPIPMRGVGDKPSDHALPGTVDLRDLEQVAL
HGAPAPKLAKTA

Sequences:

>Translated_652_residues
MELPRRARGDELLVPGKMASLRARLRRLSGQHDLTTVIVNAFDHRTRVLPFVLADTRMAPGGVRAIGAALADVGFDKTRI
VLQQWNRNFSPLQMRLDGRIPDLFLVSSMHLHSAECDRLIREACQIDPDKRPLIMVGGPRIRYEPWHVFGGTRDATWSAD
VAVTGEEYVFLELLDVLLSMRAPGESMRSVFQRARDDGALDEVPGIVYARRSSRSGPIEELVDTGVQRLLGDLDELPDPV
HGYKLLEAPSNSATLASQALPINRVKRHSPIASIVMTAGCKFRCSYCPIPAYNQSQFRAKSGERIAEEIGQIASTFGIYH
FFGADDNFFNDTKRTLDIAGTLARKRSERPFCKVRLGTEVTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQD
KDKTQLAFKLLRENNILPMPMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSISTQVMMLTPAPGSKWYENVFESGMAFSR
AGDIKVEPHIMDGNYVVASKHPRPWLKQLNLLLAYTYFFNPIRFLSALVFSKSADVFSSAETRPAHEVAHFSPAKRMRRR
AWLKFRAHIVDAGAQIYGMIGLAHTYRRTAGWAWRLLRGDIERHDRAPVSPIPMRGVGDKPSDHALPGTVDLRDLEQVAL
HGAPAPKLAKTA
>Mature_652_residues
MELPRRARGDELLVPGKMASLRARLRRLSGQHDLTTVIVNAFDHRTRVLPFVLADTRMAPGGVRAIGAALADVGFDKTRI
VLQQWNRNFSPLQMRLDGRIPDLFLVSSMHLHSAECDRLIREACQIDPDKRPLIMVGGPRIRYEPWHVFGGTRDATWSAD
VAVTGEEYVFLELLDVLLSMRAPGESMRSVFQRARDDGALDEVPGIVYARRSSRSGPIEELVDTGVQRLLGDLDELPDPV
HGYKLLEAPSNSATLASQALPINRVKRHSPIASIVMTAGCKFRCSYCPIPAYNQSQFRAKSGERIAEEIGQIASTFGIYH
FFGADDNFFNDTKRTLDIAGTLARKRSERPFCKVRLGTEVTVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQD
KDKTQLAFKLLRENNILPMPMMMHHDSQPLVTWKSNYGLINQIRLLRKAGSISTQVMMLTPAPGSKWYENVFESGMAFSR
AGDIKVEPHIMDGNYVVASKHPRPWLKQLNLLLAYTYFFNPIRFLSALVFSKSADVFSSAETRPAHEVAHFSPAKRMRRR
AWLKFRAHIVDAGAQIYGMIGLAHTYRRTAGWAWRLLRGDIERHDRAPVSPIPMRGVGDKPSDHALPGTVDLRDLEQVAL
HGAPAPKLAKTA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72990; Mature: 72990

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPRRARGDELLVPGKMASLRARLRRLSGQHDLTTVIVNAFDHRTRVLPFVLADTRMAP
CCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHEEEEEEECCCCCC
GGVRAIGAALADVGFDKTRIVLQQWNRNFSPLQMRLDGRIPDLFLVSSMHLHSAECDRLI
CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHH
REACQIDPDKRPLIMVGGPRIRYEPWHVFGGTRDATWSADVAVTGEEYVFLELLDVLLSM
HHHHCCCCCCCCEEEECCCEEEECCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHC
RAPGESMRSVFQRARDDGALDEVPGIVYARRSSRSGPIEELVDTGVQRLLGDLDELPDPV
CCCCHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
HGYKLLEAPSNSATLASQALPINRVKRHSPIASIVMTAGCKFRCSYCPIPAYNQSQFRAK
CCCEEEECCCCCCHHHHHCCCHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
SGERIAEEIGQIASTFGIYHFFGADDNFFNDTKRTLDIAGTLARKRSERPFCKVRLGTEV
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE
TVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQDKDKTQLAFKLLRENNILPMP
EEECCCCCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
MMMHHDSQPLVTWKSNYGLINQIRLLRKAGSISTQVMMLTPAPGSKWYENVFESGMAFSR
HHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCC
AGDIKVEPHIMDGNYVVASKHPRPWLKQLNLLLAYTYFFNPIRFLSALVFSKSADVFSSA
CCCEEECEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
ETRPAHEVAHFSPAKRMRRRAWLKFRAHIVDAGAQIYGMIGLAHTYRRTAGWAWRLLRGD
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERHDRAPVSPIPMRGVGDKPSDHALPGTVDLRDLEQVALHGAPAPKLAKTA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MELPRRARGDELLVPGKMASLRARLRRLSGQHDLTTVIVNAFDHRTRVLPFVLADTRMAP
CCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHEEEEEEECCCCCC
GGVRAIGAALADVGFDKTRIVLQQWNRNFSPLQMRLDGRIPDLFLVSSMHLHSAECDRLI
CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHH
REACQIDPDKRPLIMVGGPRIRYEPWHVFGGTRDATWSADVAVTGEEYVFLELLDVLLSM
HHHHCCCCCCCCEEEECCCEEEECCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHC
RAPGESMRSVFQRARDDGALDEVPGIVYARRSSRSGPIEELVDTGVQRLLGDLDELPDPV
CCCCHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
HGYKLLEAPSNSATLASQALPINRVKRHSPIASIVMTAGCKFRCSYCPIPAYNQSQFRAK
CCCEEEECCCCCCHHHHHCCCHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHH
SGERIAEEIGQIASTFGIYHFFGADDNFFNDTKRTLDIAGTLARKRSERPFCKVRLGTEV
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE
TVHDTVGMRDHLPLIRDAGFAAVWLGVEDMTATLVKKAQDKDKTQLAFKLLRENNILPMP
EEECCCCCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
MMMHHDSQPLVTWKSNYGLINQIRLLRKAGSISTQVMMLTPAPGSKWYENVFESGMAFSR
HHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCC
AGDIKVEPHIMDGNYVVASKHPRPWLKQLNLLLAYTYFFNPIRFLSALVFSKSADVFSSA
CCCEEECEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
ETRPAHEVAHFSPAKRMRRRAWLKFRAHIVDAGAQIYGMIGLAHTYRRTAGWAWRLLRGD
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERHDRAPVSPIPMRGVGDKPSDHALPGTVDLRDLEQVALHGAPAPKLAKTA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA