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The map label for this gene is 192290605

Identifier: 192290605

GI number: 192290605

Start: 2400239

End: 2402308

Strand: Reverse

Name: 192290605

Synonym: Rpal_2214

Alternate gene names: NA

Gene position: 2402308-2400239 (Counterclockwise)

Preceding gene: 192290606

Following gene: 192290598

Centisome position: 41.82

GC content: 66.57

Gene sequence:

>2070_bases
ATGTCTCATTCCCGCGGCCGCACAGCCAAGACCCTCGCTTTCCTCGCCGCGTCCGCGCTGGTCGTGATCGGAGGCGTGGC
GCTGTGGATCATTCAGCCGCCCGCCGTCGACGCCAACCTCAAGGCCGTCGATGCTCAGGTCGATCCCGAGCTGATCAAGC
GCGGCGAGTACATCGCGCGAGCTGGTGACTGCGTCGCATGCCACACCGCGCCGGGCGGCACGCCGATGGCCGGCGGCCTG
AAGCTCGACACGCCGTTCGGCAGCCTGTGGTCGACCAACATCACGCCCGATCGCGCCACCGGAATCGGCAGCTGGTCGTT
CGGCGAGTTCGACCGTGCCATGCGCAAGGGCGTCGCGGCGGACGGGCACAATCTGTATCCGGCGATGCCGTATCCGTCCT
ACGCCAAGATCAGCAGCGACGACATGGTCGCGCTGTGGGCGTATCTGACCAAGGGCCTCGCACCGGTTGCGCAGGCCAAT
CGCGCGCCGGAGATGAGCTTCCCGTTCAACATGCGGATCGGGCTGGCGTTCTGGAACGTCGCTTTCCTCGATGCGTCGCC
GTTCAAGCCGGAGCCGAACCAGGACGCCGTTTGGAATCGCGGCGCCTATCTGGTGCAGGGCCTCGGTCATTGCGGCGCCT
GCCACACCCCGCGCGGCATCGCCTTCCAGGAAAAGGCGATGAGCGATGCCGGACCACACGGCCGCGACTATCTCGCCGGC
GCCAAGGTCGAAAACTGGAATGCGCTGAACCTGCGCGGACTGTGGACGGTGCCTGACACCGTGCAGATGCTGAAGACTGG
CCAGAACCGTTTCGCCACGGCGGCGGGCGGCATGACCGATGTGATCCGGCATTCGACCCAGCACATGACCGATCAGGATC
TCACCGCGATCGCGACTTACCTGAAGGCGCTGCCGACCGATCGGCCGGCGCCCGCGGCCGCCGTGGCTGAAGTGCCGGCG
TCGACCTACACCACGGCCGGCGGGCTCGGTTACACGCAGTTCTGCGCCGACTGCCATCGCGCCGACGGCGCCGGAGTCCC
CGGCGTGTTCCCGCCGCTCGCCGGCAATCCGACGATCGCCGCCAAGGATCCGGCAACGCTGGTGCACATCACCCTCACCG
GTTGGGAGACGACAGCGACCACCGCGCATCCGCGGGTATGGACGATGCCGTCGTTTGCCCGCCTGAACGATCGTGAGATC
GCCGACATCCTCAGCTTCGTGCGCGCCAATTGGGGCGGCAACGCCAGTGCTGTCACGGCCGAGCAGATCGCCGCCGCTCG
CGCCGCGCTCGATCCCAAGATCGATACCTCGCGGTTCGAAACGCCGCGGATCGCCGATATCCTGTCACAGCCGAACGCCG
AGCAACTGGTGCGCGGCATGCGGCTGAATGCCGAAACCCACACGCTGCTGCCGAACAATGTCGGCAACGATCTGAATTGC
AGCTCGTGTCACCTCAACGCCGGCACCGTCGCCGACGGCAGCCCCTATGTCGGCGTCGCAGCATTCTTCCCGAGCTACGC
GCCGCGCGCCGGCCGCGTCATCACGCTGGAGGACCGCATCAATGGCTGCTTCCTGCGCTCGATGAACGGCAAGCCACTGC
CGGTCGACGGCCCCGACATGAAAGCGATGGTCGCTTATTTCGACTGGATGCAGGGCTCGACCAAGCCGGAGGATAAGGTC
GCCGGCCGCGGCGTCGGCAAGGTCGATCAGTCGCTGGTGCCCAATCTCGACAACGGCAAGGAGATCTACACGGCGCGCTG
CGCGGTGTGTCACGGCGACAATGGCGAAGGGCTGAAGGACGCCGCCGGCCGTGTGGTGTACCCGCCGCTGTGGGGACCGC
GCTCGTTCAATATCGGCGCCGGAATGGCCCGGACCTACACCGCGGCCGCTTTCGTCAAGCGCAACATGCCGATCGCGAGC
CACAACAAATTCCCGCTCGGCCAGGGTGAGCTGTCCGATCAGGAAGCGGTCGACGTCGCGGCGTACTTCACCCACATGGA
ACGGCCGGATTTTCCCGGCAAGGTGAAGGACTGGCCGAAGGACCAGAAGCCGAAGGACGCGCGCTACTGA

Upstream 100 bases:

>100_bases
CGCCAGATAAACCTTCACGATCTAAGTGGTAGGCCCGAGTTGAGGCGGCGCAGGGTCGCGCCTAGCGTCGCACCGCAACA
AATATCGAGTCGAGTCCACC

Downstream 100 bases:

>100_bases
TCGCAGCGGCGTAACGACATCACATCAACGTCCCCCGACCACCGGGCCGGGGTCGAAGATCTTGCCGGGGTTGAGGATGC
CCTTGGGATCGAGCGCCTGC

Product: gluconate 2-dehydrogenase (acceptor)

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MSHSRGRTAKTLAFLAASALVVIGGVALWIIQPPAVDANLKAVDAQVDPELIKRGEYIARAGDCVACHTAPGGTPMAGGL
KLDTPFGSLWSTNITPDRATGIGSWSFGEFDRAMRKGVAADGHNLYPAMPYPSYAKISSDDMVALWAYLTKGLAPVAQAN
RAPEMSFPFNMRIGLAFWNVAFLDASPFKPEPNQDAVWNRGAYLVQGLGHCGACHTPRGIAFQEKAMSDAGPHGRDYLAG
AKVENWNALNLRGLWTVPDTVQMLKTGQNRFATAAGGMTDVIRHSTQHMTDQDLTAIATYLKALPTDRPAPAAAVAEVPA
STYTTAGGLGYTQFCADCHRADGAGVPGVFPPLAGNPTIAAKDPATLVHITLTGWETTATTAHPRVWTMPSFARLNDREI
ADILSFVRANWGGNASAVTAEQIAAARAALDPKIDTSRFETPRIADILSQPNAEQLVRGMRLNAETHTLLPNNVGNDLNC
SSCHLNAGTVADGSPYVGVAAFFPSYAPRAGRVITLEDRINGCFLRSMNGKPLPVDGPDMKAMVAYFDWMQGSTKPEDKV
AGRGVGKVDQSLVPNLDNGKEIYTARCAVCHGDNGEGLKDAAGRVVYPPLWGPRSFNIGAGMARTYTAAAFVKRNMPIAS
HNKFPLGQGELSDQEAVDVAAYFTHMERPDFPGKVKDWPKDQKPKDARY

Sequences:

>Translated_689_residues
MSHSRGRTAKTLAFLAASALVVIGGVALWIIQPPAVDANLKAVDAQVDPELIKRGEYIARAGDCVACHTAPGGTPMAGGL
KLDTPFGSLWSTNITPDRATGIGSWSFGEFDRAMRKGVAADGHNLYPAMPYPSYAKISSDDMVALWAYLTKGLAPVAQAN
RAPEMSFPFNMRIGLAFWNVAFLDASPFKPEPNQDAVWNRGAYLVQGLGHCGACHTPRGIAFQEKAMSDAGPHGRDYLAG
AKVENWNALNLRGLWTVPDTVQMLKTGQNRFATAAGGMTDVIRHSTQHMTDQDLTAIATYLKALPTDRPAPAAAVAEVPA
STYTTAGGLGYTQFCADCHRADGAGVPGVFPPLAGNPTIAAKDPATLVHITLTGWETTATTAHPRVWTMPSFARLNDREI
ADILSFVRANWGGNASAVTAEQIAAARAALDPKIDTSRFETPRIADILSQPNAEQLVRGMRLNAETHTLLPNNVGNDLNC
SSCHLNAGTVADGSPYVGVAAFFPSYAPRAGRVITLEDRINGCFLRSMNGKPLPVDGPDMKAMVAYFDWMQGSTKPEDKV
AGRGVGKVDQSLVPNLDNGKEIYTARCAVCHGDNGEGLKDAAGRVVYPPLWGPRSFNIGAGMARTYTAAAFVKRNMPIAS
HNKFPLGQGELSDQEAVDVAAYFTHMERPDFPGKVKDWPKDQKPKDARY
>Mature_688_residues
SHSRGRTAKTLAFLAASALVVIGGVALWIIQPPAVDANLKAVDAQVDPELIKRGEYIARAGDCVACHTAPGGTPMAGGLK
LDTPFGSLWSTNITPDRATGIGSWSFGEFDRAMRKGVAADGHNLYPAMPYPSYAKISSDDMVALWAYLTKGLAPVAQANR
APEMSFPFNMRIGLAFWNVAFLDASPFKPEPNQDAVWNRGAYLVQGLGHCGACHTPRGIAFQEKAMSDAGPHGRDYLAGA
KVENWNALNLRGLWTVPDTVQMLKTGQNRFATAAGGMTDVIRHSTQHMTDQDLTAIATYLKALPTDRPAPAAAVAEVPAS
TYTTAGGLGYTQFCADCHRADGAGVPGVFPPLAGNPTIAAKDPATLVHITLTGWETTATTAHPRVWTMPSFARLNDREIA
DILSFVRANWGGNASAVTAEQIAAARAALDPKIDTSRFETPRIADILSQPNAEQLVRGMRLNAETHTLLPNNVGNDLNCS
SCHLNAGTVADGSPYVGVAAFFPSYAPRAGRVITLEDRINGCFLRSMNGKPLPVDGPDMKAMVAYFDWMQGSTKPEDKVA
GRGVGKVDQSLVPNLDNGKEIYTARCAVCHGDNGEGLKDAAGRVVYPPLWGPRSFNIGAGMARTYTAAAFVKRNMPIASH
NKFPLGQGELSDQEAVDVAAYFTHMERPDFPGKVKDWPKDQKPKDARY

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 73763; Mature: 73632

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSRGRTAKTLAFLAASALVVIGGVALWIIQPPAVDANLKAVDAQVDPELIKRGEYIAR
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCHHHHHCCCHHCC
AGDCVACHTAPGGTPMAGGLKLDTPFGSLWSTNITPDRATGIGSWSFGEFDRAMRKGVAA
CCCEEEEECCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCC
DGHNLYPAMPYPSYAKISSDDMVALWAYLTKGLAPVAQANRAPEMSFPFNMRIGLAFWNV
CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEEEE
AFLDASPFKPEPNQDAVWNRGAYLVQGLGHCGACHTPRGIAFQEKAMSDAGPHGRDYLAG
EEECCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCC
AKVENWNALNLRGLWTVPDTVQMLKTGQNRFATAAGGMTDVIRHSTQHMTDQDLTAIATY
CCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHH
LKALPTDRPAPAAAVAEVPASTYTTAGGLGYTQFCADCHRADGAGVPGVFPPLAGNPTIA
HHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
AKDPATLVHITLTGWETTATTAHPRVWTMPSFARLNDREIADILSFVRANWGGNASAVTA
CCCCCEEEEEEEECCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
EQIAAARAALDPKIDTSRFETPRIADILSQPNAEQLVRGMRLNAETHTLLPNNVGNDLNC
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCC
SSCHLNAGTVADGSPYVGVAAFFPSYAPRAGRVITLEDRINGCFLRSMNGKPLPVDGPDM
CEEECCCCCCCCCCCCEEHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCH
KAMVAYFDWMQGSTKPEDKVAGRGVGKVDQSLVPNLDNGKEIYTARCAVCHGDNGEGLKD
HHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHH
AAGRVVYPPLWGPRSFNIGAGMARTYTAAAFVKRNMPIASHNKFPLGQGELSDQEAVDVA
HCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
AYFTHMERPDFPGKVKDWPKDQKPKDARY
HHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHSRGRTAKTLAFLAASALVVIGGVALWIIQPPAVDANLKAVDAQVDPELIKRGEYIAR
CCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEECCCCCHHHHHCCCHHCC
AGDCVACHTAPGGTPMAGGLKLDTPFGSLWSTNITPDRATGIGSWSFGEFDRAMRKGVAA
CCCEEEEECCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCC
DGHNLYPAMPYPSYAKISSDDMVALWAYLTKGLAPVAQANRAPEMSFPFNMRIGLAFWNV
CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEEEE
AFLDASPFKPEPNQDAVWNRGAYLVQGLGHCGACHTPRGIAFQEKAMSDAGPHGRDYLAG
EEECCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCC
AKVENWNALNLRGLWTVPDTVQMLKTGQNRFATAAGGMTDVIRHSTQHMTDQDLTAIATY
CCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHH
LKALPTDRPAPAAAVAEVPASTYTTAGGLGYTQFCADCHRADGAGVPGVFPPLAGNPTIA
HHHCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
AKDPATLVHITLTGWETTATTAHPRVWTMPSFARLNDREIADILSFVRANWGGNASAVTA
CCCCCEEEEEEEECCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHH
EQIAAARAALDPKIDTSRFETPRIADILSQPNAEQLVRGMRLNAETHTLLPNNVGNDLNC
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCC
SSCHLNAGTVADGSPYVGVAAFFPSYAPRAGRVITLEDRINGCFLRSMNGKPLPVDGPDM
CEEECCCCCCCCCCCCEEHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCH
KAMVAYFDWMQGSTKPEDKVAGRGVGKVDQSLVPNLDNGKEIYTARCAVCHGDNGEGLKD
HHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCHHH
AAGRVVYPPLWGPRSFNIGAGMARTYTAAAFVKRNMPIASHNKFPLGQGELSDQEAVDVA
HCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
AYFTHMERPDFPGKVKDWPKDQKPKDARY
HHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]