| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290433
Identifier: 192290433
GI number: 192290433
Start: 2211505
End: 2211969
Strand: Reverse
Name: 192290433
Synonym: Rpal_2040
Alternate gene names: NA
Gene position: 2211969-2211505 (Counterclockwise)
Preceding gene: 192290434
Following gene: 192290432
Centisome position: 38.51
GC content: 66.24
Gene sequence:
>465_bases ATGACGGGGACCGGCAAAGCGGTGCTCTCCGGCGGCTGCCAGTGCGGCGCGATCCGCTACGCGCTGTCGGCGCCGCCGCT GAGCACGGCGCTGTGCCATTGCCGGATGTGCCAGAAGGCGACCGGGGCACCGTTCGCCTCTATGGCCGAGGTCGCCAAGG ACAACTTTGCCTGGACCCGCGGCCAGCCTGCGTCGTTCCGCTCCTCCTCGGTCGCCGAGCGCGACTTCTGCAAGGATTGC GGCACCCCGCTGGGCTATCGGCTGATGTTCTGCGACAGCATCGAGATCCTGACCGGAACTTTCGATCGGCCGGACCGGGT GGTCCCGACAATGCAATACGGCACCGAAGCAAGGCTCGGCTGGACCGGCACGATCGCGAACCTGCCGAGCAAGACCACGC TGCAGAACTACGGGCCCGACAGGCTGGCACAAGTGTTCAGCTATCAGCAGCCGGACCACGATTAA
Upstream 100 bases:
>100_bases AGGAGAGCGCGCTGCGCGAAGCCGGTGTGCAGGAGTTCGTGTTCGCCGGCGGCGACGCGCTGGCGACGCTCAGTGACGCC TGGAAGGGCATCGAAGCGGC
Downstream 100 bases:
>100_bases CCCGACGAAATGACGAGAAACGGCAGCCGTGCTACGATGGGCTGTAGTGAGATCAGATAAAAATGAGCAAGATTCCGAAC TTCGCCGAGATCGCATTCCA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Gfa
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTGTGKAVLSGGCQCGAIRYALSAPPLSTALCHCRMCQKATGAPFASMAEVAKDNFAWTRGQPASFRSSSVAERDFCKDC GTPLGYRLMFCDSIEILTGTFDRPDRVVPTMQYGTEARLGWTGTIANLPSKTTLQNYGPDRLAQVFSYQQPDHD
Sequences:
>Translated_154_residues MTGTGKAVLSGGCQCGAIRYALSAPPLSTALCHCRMCQKATGAPFASMAEVAKDNFAWTRGQPASFRSSSVAERDFCKDC GTPLGYRLMFCDSIEILTGTFDRPDRVVPTMQYGTEARLGWTGTIANLPSKTTLQNYGPDRLAQVFSYQQPDHD >Mature_153_residues TGTGKAVLSGGCQCGAIRYALSAPPLSTALCHCRMCQKATGAPFASMAEVAKDNFAWTRGQPASFRSSSVAERDFCKDCG TPLGYRLMFCDSIEILTGTFDRPDRVVPTMQYGTEARLGWTGTIANLPSKTTLQNYGPDRLAQVFSYQQPDHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16687; Mature: 16556
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTGKAVLSGGCQCGAIRYALSAPPLSTALCHCRMCQKATGAPFASMAEVAKDNFAWTR CCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC GQPASFRSSSVAERDFCKDCGTPLGYRLMFCDSIEILTGTFDRPDRVVPTMQYGTEARLG CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCC WTGTIANLPSKTTLQNYGPDRLAQVFSYQQPDHD CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure TGTGKAVLSGGCQCGAIRYALSAPPLSTALCHCRMCQKATGAPFASMAEVAKDNFAWTR CCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC GQPASFRSSSVAERDFCKDCGTPLGYRLMFCDSIEILTGTFDRPDRVVPTMQYGTEARLG CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCC WTGTIANLPSKTTLQNYGPDRLAQVFSYQQPDHD CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA