| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290424
Identifier: 192290424
GI number: 192290424
Start: 2204868
End: 2205128
Strand: Reverse
Name: 192290424
Synonym: Rpal_2031
Alternate gene names: NA
Gene position: 2205128-2204868 (Counterclockwise)
Preceding gene: 192290425
Following gene: 192290423
Centisome position: 38.39
GC content: 63.98
Gene sequence:
>261_bases ATGCCGTACGCGCTGTTTTGCGACGATGCCAGGGTCAGCAAGATCTATCCGACTCAAGCCGACGTCTGGAAGCACGCCAG GGAGAGCGGGCTGGTGATCGACACGGACACTCCTCGGCACGTGCTCGACAATGGCTATGAGATTCGTGCCAGCGCGCCGG AACCGGGCGAAGATCCGGAGCGCAATGAGCGCGAGGCCCGGGCCGCGAGCCATGATCAGTTTGTACCGCCCCAGCGTGAG CCGGAGCGTACGCCGGGTTAA
Upstream 100 bases:
>100_bases GACCCGGCAGACCCGCCGGGTAGCGGCCGCTTGAGATCGCATCGCTCAGGAAAGAACCCCGTGGTGCTGCCCGGCGTTGT CCTCTTCCGAGGAGGAACCG
Downstream 100 bases:
>100_bases CCCTACCGCGAAACATCACCCCGCCTGCTCCCCGGCTTGGCCCGCGCCTCGGCGGAATTTGCGTTAGCTGTGGAGACTAG GTTTTCGCCCCACCGAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MPYALFCDDARVSKIYPTQADVWKHARESGLVIDTDTPRHVLDNGYEIRASAPEPGEDPERNEREARAASHDQFVPPQRE PERTPG
Sequences:
>Translated_86_residues MPYALFCDDARVSKIYPTQADVWKHARESGLVIDTDTPRHVLDNGYEIRASAPEPGEDPERNEREARAASHDQFVPPQRE PERTPG >Mature_85_residues PYALFCDDARVSKIYPTQADVWKHARESGLVIDTDTPRHVLDNGYEIRASAPEPGEDPERNEREARAASHDQFVPPQREP ERTPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9758; Mature: 9627
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYALFCDDARVSKIYPTQADVWKHARESGLVIDTDTPRHVLDNGYEIRASAPEPGEDPE CCEEEECCCCCCCEECCCHHHHHHHHHHCCCEEECCCCHHHHCCCEEEEECCCCCCCCCC RNEREARAASHDQFVPPQREPERTPG CCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PYALFCDDARVSKIYPTQADVWKHARESGLVIDTDTPRHVLDNGYEIRASAPEPGEDPE CEEEECCCCCCCEECCCHHHHHHHHHHCCCEEECCCCHHHHCCCEEEEECCCCCCCCCC RNEREARAASHDQFVPPQREPERTPG CCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA