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The map label for this gene is amaB [H]

Identifier: 192290338

GI number: 192290338

Start: 2098215

End: 2099465

Strand: Reverse

Name: amaB [H]

Synonym: Rpal_1945

Alternate gene names: 192290338

Gene position: 2099465-2098215 (Counterclockwise)

Preceding gene: 192290339

Following gene: 192290337

Centisome position: 36.55

GC content: 66.03

Gene sequence:

>1251_bases
ATGACCAAGACTGCCTCGAACCTGCAGATCGATTCCTCGCGGCTGTGGGACACTATCGTCAGCACCGCGCAGTTCGGCGG
CACTCCGAAAGGCGGCGTGAAGCGCCTGACGCTGTCGGCGGAAGACAAGCAGGTGCGCGACTGGTTTCGCCAGGCGTGCG
AGCAGGCAGGCCTCGAGGTCAGCATCGATTCACTCGGCAACATGTTCGCGCTACGCAAGGGCCGCGACATGACCAAGCCA
CCGATCGGCCTCGGCTCGCATCTCGATACCCAGCCGACCGGCGGCAAGTTTGACGGCATCCTCGGCACCCTCGCCGCTCT
CGAAGTGATCCGGACCCTCAACGACGCCGGCATCGAGACCGAGCTGCCGCTGTGCATCACCAACTGGACCAATGAGGAAG
GCTCGCGATTCGCCCCGGCGATGATGGGCTCGGCGGCGTTCGTCGGCGACTTCACCGTCGAGGACGTGCTGTCGCGCAGG
GATGCGGCCGGCATCAGCGTCGCCGAAGCGCTCGACAGCATCGGCTATCGCGGCGACAAACTGGTTGGCGCCCAACCGTT
CACCGGCTTCATCGAGCTGCATATCGAGCAGGGCCCGATCCTGGAGGCGGAAAGCAAGACCATCGGCGTGGTCGATCACG
GCCAGGGCGTGCTGTGGTACGACGGCAAGATCACCGGCTTCGAAAGCCATGCCGGATCGACCCCGATGCATCTGCGCCGC
GACGCGCTGGCGACGCTGTCGGAGATCGTGCTGGCGGTCGAGAAGATCGCAACCGAACTCGGCCCCAATGCCGTCGGCAC
TGTCGGCGAAGCGGTGATCGCCTCCCCGTCACGCAACGTCATTCCCGGCGAGATCGCCTTCACCATCGACATGCGCAGCG
CCGATGCGGCGATCATGGATCAGCTCGACCAGCGGCTGCGCGCCGCGATCGCCGAGATCGCGCCGCGGCGCAAGGTCGAG
GTCGCGCTCGATCTGGTGTGGCGCAAGGAGCCGACGCACTTCGATCCTGCCCTGGTCGGCAGCGTCGAGAACGCCGCCAA
CGCCCTCGGCTATCAGAACCGCCGCATCACCTCCGGCGCCGGCCACGATGCCTGCAACCTCAACACCAGAATCCCGACCG
CGATGATCTTCGTGCCCTGCAAGGACGGCATCAGCCATAACGAGTTGGAGGACGCGACCCAGCCCGACTGCGCCGCCGGT
GCCAACGTGCTGCTGCACACCGTGCTGTCACTCGCCGGCGTCGCCAAGTAA

Upstream 100 bases:

>100_bases
TGCTCACGTCGTTGAACCGGCGATTGGTTGACGCGCGCCCAGCCGGCTTGACACACTTTCGTTCTGCCTCGCGCGTCCGC
GCTGAATTACCGGAGTGACT

Downstream 100 bases:

>100_bases
TCGCCGACAAACCAGCCGATAGGGGGAGATCACGATGCACGCGGTGTTCGTCGACGCCAGCGATACGCTCGCCGAGCTGA
TGGAGCGCATGGCGACGCCG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTKTASNLQIDSSRLWDTIVSTAQFGGTPKGGVKRLTLSAEDKQVRDWFRQACEQAGLEVSIDSLGNMFALRKGRDMTKP
PIGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIETELPLCITNWTNEEGSRFAPAMMGSAAFVGDFTVEDVLSRR
DAAGISVAEALDSIGYRGDKLVGAQPFTGFIELHIEQGPILEAESKTIGVVDHGQGVLWYDGKITGFESHAGSTPMHLRR
DALATLSEIVLAVEKIATELGPNAVGTVGEAVIASPSRNVIPGEIAFTIDMRSADAAIMDQLDQRLRAAIAEIAPRRKVE
VALDLVWRKEPTHFDPALVGSVENAANALGYQNRRITSGAGHDACNLNTRIPTAMIFVPCKDGISHNELEDATQPDCAAG
ANVLLHTVLSLAGVAK

Sequences:

>Translated_416_residues
MTKTASNLQIDSSRLWDTIVSTAQFGGTPKGGVKRLTLSAEDKQVRDWFRQACEQAGLEVSIDSLGNMFALRKGRDMTKP
PIGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIETELPLCITNWTNEEGSRFAPAMMGSAAFVGDFTVEDVLSRR
DAAGISVAEALDSIGYRGDKLVGAQPFTGFIELHIEQGPILEAESKTIGVVDHGQGVLWYDGKITGFESHAGSTPMHLRR
DALATLSEIVLAVEKIATELGPNAVGTVGEAVIASPSRNVIPGEIAFTIDMRSADAAIMDQLDQRLRAAIAEIAPRRKVE
VALDLVWRKEPTHFDPALVGSVENAANALGYQNRRITSGAGHDACNLNTRIPTAMIFVPCKDGISHNELEDATQPDCAAG
ANVLLHTVLSLAGVAK
>Mature_415_residues
TKTASNLQIDSSRLWDTIVSTAQFGGTPKGGVKRLTLSAEDKQVRDWFRQACEQAGLEVSIDSLGNMFALRKGRDMTKPP
IGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIETELPLCITNWTNEEGSRFAPAMMGSAAFVGDFTVEDVLSRRD
AAGISVAEALDSIGYRGDKLVGAQPFTGFIELHIEQGPILEAESKTIGVVDHGQGVLWYDGKITGFESHAGSTPMHLRRD
ALATLSEIVLAVEKIATELGPNAVGTVGEAVIASPSRNVIPGEIAFTIDMRSADAAIMDQLDQRLRAAIAEIAPRRKVEV
ALDLVWRKEPTHFDPALVGSVENAANALGYQNRRITSGAGHDACNLNTRIPTAMIFVPCKDGISHNELEDATQPDCAAGA
NVLLHTVLSLAGVAK

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=401, Percent_Identity=33.4164588528678, Blast_Score=207, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44305; Mature: 44174

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTASNLQIDSSRLWDTIVSTAQFGGTPKGGVKRLTLSAEDKQVRDWFRQACEQAGLEV
CCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE
SIDSLGNMFALRKGRDMTKPPIGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIET
EHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ELPLCITNWTNEEGSRFAPAMMGSAAFVGDFTVEDVLSRRDAAGISVAEALDSIGYRGDK
CCCEEEECCCCCCCCEECHHHHCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCE
LVGAQPFTGFIELHIEQGPILEAESKTIGVVDHGQGVLWYDGKITGFESHAGSTPMHLRR
EECCCCCCEEEEEEECCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCCCCCHHHHH
DALATLSEIVLAVEKIATELGPNAVGTVGEAVIASPSRNVIPGEIAFTIDMRSADAAIMD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCEEEEEEEECCCCHHHHH
QLDQRLRAAIAEIAPRRKVEVALDLVWRKEPTHFDPALVGSVENAANALGYQNRRITSGA
HHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCHHHHCCHHHHHHHHCCCCCEECCCC
GHDACNLNTRIPTAMIFVPCKDGISHNELEDATQPDCAAGANVLLHTVLSLAGVAK
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKTASNLQIDSSRLWDTIVSTAQFGGTPKGGVKRLTLSAEDKQVRDWFRQACEQAGLEV
CCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE
SIDSLGNMFALRKGRDMTKPPIGLGSHLDTQPTGGKFDGILGTLAALEVIRTLNDAGIET
EHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ELPLCITNWTNEEGSRFAPAMMGSAAFVGDFTVEDVLSRRDAAGISVAEALDSIGYRGDK
CCCEEEECCCCCCCCEECHHHHCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCE
LVGAQPFTGFIELHIEQGPILEAESKTIGVVDHGQGVLWYDGKITGFESHAGSTPMHLRR
EECCCCCCEEEEEEECCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCCCCCHHHHH
DALATLSEIVLAVEKIATELGPNAVGTVGEAVIASPSRNVIPGEIAFTIDMRSADAAIMD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCEEEEEEEECCCCHHHHH
QLDQRLRAAIAEIAPRRKVEVALDLVWRKEPTHFDPALVGSVENAANALGYQNRRITSGA
HHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCHHHHCCHHHHHHHHCCCCCEECCCC
GHDACNLNTRIPTAMIFVPCKDGISHNELEDATQPDCAAGANVLLHTVLSLAGVAK
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]