| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290323
Identifier: 192290323
GI number: 192290323
Start: 2081465
End: 2082688
Strand: Reverse
Name: 192290323
Synonym: Rpal_1930
Alternate gene names: NA
Gene position: 2082688-2081465 (Counterclockwise)
Preceding gene: 192290324
Following gene: 192290322
Centisome position: 36.26
GC content: 66.26
Gene sequence:
>1224_bases ATGCCCACCGAACGTTTCCAATTTGCAGGCAGCGGCGGGCATCAACTCGCGGCGGCGCTCGATCTGCCGGATGCGCAGCC TCTCGCCTATGCGCTGTTCGCGCATTGCTTCACCTGCAGCAAGGACAACCTTGCGGCACGGCGGATCGCGGCGGCGCTGG CGGCGTGCGGCATCGCGGTGCTGCGGTTCGACTTCACCGGGCTTGGCGCCAGCGAGGGCGAGTTCGAAAACGCGACGTTT TCGTCCAACGTCGCCGATCTGGTGCTGGCGGCGGACCATCTGCGCGCGACGCATCGGGCGCCGTCACTGCTGATCGGCCA CAGTCTCGGCGGCGCTGCGGTGCTGGCAGCCGCAGCACAGATTCCCGAAGCGAAGGCGATCGCCACCATTGCGGCGCCGT CCGATCCGTCGCACGTCACCGGACTATTTGCCGATGATATCGAGACGATCCGCACTGAAGGCCGCGTCAATGTTTCGCTG GCCGGCCGCCCGTTTACGATCAAGCGCGAGTTTCTCGACGACATCGCCGAACACAATCTGATGGCCGAGATCGGCAAGCT GCACAAAGCGCTGCTGATCCTGCACGCGCCGACCGACGACACCGTCGGCATCGACAACGCCACCAAGATCTTTCTCGCGG CCAAACATCCGAAGAGCTTCGTCTCGCTCGATCACGCCGACCATCTGCTGAGCGATCGCCGTGACGCGAACTACGCCGCG GGGGTGATCGCCGCCTGGGCGCAGCGCTACATCGATGCCGAACCGCCGGCCCCGACCGCCGGCGCGCCAGAAGTGCCGCG CCTCGTCACCGTGCAGGAAACCGGCGACGGCAAGTTCCAGCAGCAGATCAGCGTCGGACCGCATCGGCTGCTCGCCGATG AGCCGGCCAACGTCGGCGGCCGCGACAGCGGCCCGGGGCCCTACGACCTACTGCTGTCCGCGCTCGGCGCCTGCACCTCG ATGACGATGCGGCTCTATGCCGAACGCAAGGCGCTGCCGCTCGATCGCGTCACGGTGACGCTGAGCCACGCCAAGATCCA CGCCGAGGATTGCGCCGAATGCGAAACCAAGGTCGGGCTACTCGACCGGATCGAGCGGGTGATCGGCATCGAGGGTGACC TCTCCGCCGAGCAGCGCGCCAAGCTGATCGAAATCGCCGACAAATGTCCGGTGCACCGCACCCTCACCTCGGAAGTCAGC ATCATCACGCGCAGCACCGATTGA
Upstream 100 bases:
>100_bases CGTTGCTCCACCGTGCCTTACTGCAAGGACGGAGAGTATGGATTCCGGACTTGCGAGCTTCGCTCGCAATCCGGAATGAC AACAACATGGAGGCCTGCCG
Downstream 100 bases:
>100_bases CGCTGCCGGGCGCTTCCCCGACACTACCGAAAACAACATCAGGGAGGCGGCGATGCCGGCAGTGGCGCGGATCGATCCGA AGACCATCTTCACGCCCGAC
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Hydrolase; OsmC-Like Family Protein; Redox Protein; Osmc Family Protein; OsmC-Like Protein Superfamily Protein; Hydrolase Of Alpha/Beta Superfamily Protein; Alpha/Beta Hydrolase Fold Protein; OsmC-Like Protein/ Redox Protein; Hydroperoxide Resistance Protein OsmC-Like Protein; Redox Protein Regulator Of Disulfide Bond Formation; Alpha/Beta Fold Family Hydrolase; Osmotically Inducible Protein; Regulator Of Disulfide Bond Formation Redox Protein; Hydrolytic Protein; Peptidase S; Secreted Protein
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLAARRIAAALAACGIAVLRFDFTGLGASEGEFENATF SSNVADLVLAADHLRATHRAPSLLIGHSLGGAAVLAAAAQIPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSL AGRPFTIKREFLDDIAEHNLMAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVSLDHADHLLSDRRDANYAA GVIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQQISVGPHRLLADEPANVGGRDSGPGPYDLLLSALGACTS MTMRLYAERKALPLDRVTVTLSHAKIHAEDCAECETKVGLLDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEVS IITRSTD
Sequences:
>Translated_407_residues MPTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLAARRIAAALAACGIAVLRFDFTGLGASEGEFENATF SSNVADLVLAADHLRATHRAPSLLIGHSLGGAAVLAAAAQIPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSL AGRPFTIKREFLDDIAEHNLMAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVSLDHADHLLSDRRDANYAA GVIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQQISVGPHRLLADEPANVGGRDSGPGPYDLLLSALGACTS MTMRLYAERKALPLDRVTVTLSHAKIHAEDCAECETKVGLLDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEVS IITRSTD >Mature_406_residues PTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLAARRIAAALAACGIAVLRFDFTGLGASEGEFENATFS SNVADLVLAADHLRATHRAPSLLIGHSLGGAAVLAAAAQIPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSLA GRPFTIKREFLDDIAEHNLMAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVSLDHADHLLSDRRDANYAAG VIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQQISVGPHRLLADEPANVGGRDSGPGPYDLLLSALGACTSM TMRLYAERKALPLDRVTVTLSHAKIHAEDCAECETKVGLLDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEVSI ITRSTD
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43227; Mature: 43096
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLAARRIAAALAACGIAV CCCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRFDFTGLGASEGEFENATFSSNVADLVLAADHLRATHRAPSLLIGHSLGGAAVLAAAAQ EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH IPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSLAGRPFTIKREFLDDIAEHNL CCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHH MAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVSLDHADHLLSDRRDANYAA HHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHH GVIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQQISVGPHRLLADEPANVGG HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCHHEECCCCCCCCC RDSGPGPYDLLLSALGACTSMTMRLYAERKALPLDRVTVTLSHAKIHAEDCAECETKVGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEECHHHHHHHHHHHHH LDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEVSIITRSTD HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCC >Mature Secondary Structure PTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLAARRIAAALAACGIAV CCCCEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LRFDFTGLGASEGEFENATFSSNVADLVLAADHLRATHRAPSLLIGHSLGGAAVLAAAAQ EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH IPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSLAGRPFTIKREFLDDIAEHNL CCCCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHH MAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVSLDHADHLLSDRRDANYAA HHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHH GVIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQQISVGPHRLLADEPANVGG HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCHHEECCCCCCCCC RDSGPGPYDLLLSALGACTSMTMRLYAERKALPLDRVTVTLSHAKIHAEDCAECETKVGL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEECHHHHHHHHHHHHH LDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEVSIITRSTD HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA