| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yaeR [C]
Identifier: 192290256
GI number: 192290256
Start: 1997509
End: 1998051
Strand: Reverse
Name: yaeR [C]
Synonym: Rpal_1860
Alternate gene names: 192290256
Gene position: 1998051-1997509 (Counterclockwise)
Preceding gene: 192290257
Following gene: 192290255
Centisome position: 34.78
GC content: 62.8
Gene sequence:
>543_bases ATGCAAATCCAGCAGATCCATCACGTCGCCTATCGCTGCAAGGACGCCAAGGAAACCGTCACGTTCTACGGACGAGTGAT GGGCATGGAGCTGATCGGCGCGATCGCCGAAGACAAAGTGCCGTCGACCAAGGCGCCCGATCCCTACATGCACATCTTCC TCGACGCCGGCGCCGGCAACATCCTGGCGTTCTTCGAGTTGCCGAACTCGCCGCCGATGGGCCGCGATCCGAACACCCCA GACTGGGTCCAGCACATCGCCTTCCAGGTCGATGACGTCGACACGTTGATGGCGGCGAAGCAGCGTGCCGAAGCCGAGGG GCTCGAAGTGATCGGTCCGACCGATCACACCATCTTCAAGTCGATCTACTTCCGCGATCCCAGCGGCCATCGGCTCGAAG TGGCAGCCTGGACCGCAACGCCGGAGCAGCTTGCCCAGATGAGGAGCGTCGCTCATGCGATGGTCGACGAATGGGCGGTG ACCAAGAAGCCGCCGCGCCACACCGCGTGGCTGCACCAGAAGGAATTCGCCGACGCCGAATAG
Upstream 100 bases:
>100_bases TCTCTAACGCCAGCGGCCGGATCGTTGATCCACGTCAATCTCCCGACAGGCTGGTTTGATCCAATGCGGATCAAATGCAC AAAACAATCGGGAGGACATC
Downstream 100 bases:
>100_bases CACCAGCACGACTCGGGAGTTGCACCGATGGGCAAGCTGGTACTGGCGGCCAAAGTCAGTCACGTCCCCTCACTGATGCT GTCGGAGACCTCCGAAAGTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Lactoylglutathione Lyase; Glyoxalase; Glyoxalase/Bleomycin Resistance; Lactoylglutathione Lyase And Related Lyases Protein; Glyoxalase-Family Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MQIQQIHHVAYRCKDAKETVTFYGRVMGMELIGAIAEDKVPSTKAPDPYMHIFLDAGAGNILAFFELPNSPPMGRDPNTP DWVQHIAFQVDDVDTLMAAKQRAEAEGLEVIGPTDHTIFKSIYFRDPSGHRLEVAAWTATPEQLAQMRSVAHAMVDEWAV TKKPPRHTAWLHQKEFADAE
Sequences:
>Translated_180_residues MQIQQIHHVAYRCKDAKETVTFYGRVMGMELIGAIAEDKVPSTKAPDPYMHIFLDAGAGNILAFFELPNSPPMGRDPNTP DWVQHIAFQVDDVDTLMAAKQRAEAEGLEVIGPTDHTIFKSIYFRDPSGHRLEVAAWTATPEQLAQMRSVAHAMVDEWAV TKKPPRHTAWLHQKEFADAE >Mature_180_residues MQIQQIHHVAYRCKDAKETVTFYGRVMGMELIGAIAEDKVPSTKAPDPYMHIFLDAGAGNILAFFELPNSPPMGRDPNTP DWVQHIAFQVDDVDTLMAAKQRAEAEGLEVIGPTDHTIFKSIYFRDPSGHRLEVAAWTATPEQLAQMRSVAHAMVDEWAV TKKPPRHTAWLHQKEFADAE
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20222; Mature: 20222
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIQQIHHVAYRCKDAKETVTFYGRVMGMELIGAIAEDKVPSTKAPDPYMHIFLDAGAGN CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC ILAFFELPNSPPMGRDPNTPDWVQHIAFQVDDVDTLMAAKQRAEAEGLEVIGPTDHTIFK EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCHHHHH SIYFRDPSGHRLEVAAWTATPEQLAQMRSVAHAMVDEWAVTKKPPRHTAWLHQKEFADAE HHEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MQIQQIHHVAYRCKDAKETVTFYGRVMGMELIGAIAEDKVPSTKAPDPYMHIFLDAGAGN CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC ILAFFELPNSPPMGRDPNTPDWVQHIAFQVDDVDTLMAAKQRAEAEGLEVIGPTDHTIFK EEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCHHHHH SIYFRDPSGHRLEVAAWTATPEQLAQMRSVAHAMVDEWAVTKKPPRHTAWLHQKEFADAE HHEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA