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The map label for this gene is 192290086

Identifier: 192290086

GI number: 192290086

Start: 1809756

End: 1810985

Strand: Reverse

Name: 192290086

Synonym: Rpal_1688

Alternate gene names: NA

Gene position: 1810985-1809756 (Counterclockwise)

Preceding gene: 192290087

Following gene: 192290085

Centisome position: 31.53

GC content: 64.88

Gene sequence:

>1230_bases
ATGCATGATCGCAACACCCCGTCTGCGCTGTGGACGCCGCCGCTGAACGCGCCGGCGGAGCGCGAACTGTGCACCGACTG
CGGCGTGTCGCGGATGAGCGACCCGAAGCAGTGCGGCCAAGCCTGCCAATTCATCAAGCCGGACTATCCGGCGATGGAAC
GACGGGTGCATGGCCGCAACCGCGATGCCGCGACCGGGGACGAAGCGTTCTTCGGCCCATATCGCCGGATGGTGCAGGCG
GCGATGAAACAGCCGCGTGAAGAGGCGCAGTGGACCGGCATCACCACCACGATCGCGCAGCGGCTGCTGGAGACCGGTGC
GGTCGACGCGGTGATCGCGATGGCGCCGGACCCGTCCGACAAATGGAAACCGATGCCGGTGCTGGTGACCAAGCCGGAAG
GCATGGCGCAGTGCCGCGGGATGCGAATGGGCTACGCACCGTCGCTGGCGCTGATCGAACCGGCAATCGCGGCCGGCTAC
AAGCGGCTCGCGGTGATCGGCGTGCCCTGCCAGATCTACGCGCTGCGCCGGCTGCAGGATCAGCTCGGCCTCGAAAAGCT
ATACGTGATCGGCACGCCCTGCTCGGACAACACCACCACCGAAGCGTTTCACGGCTTCCTGGATCTGCTGTCCGACAAGC
CCGAAACCATCACCTATCTGGAATTCCGCGCCGACTATCACGTCGAGCTGCGGTTCGACGACGGCAACGTCAAGGCGATC
CCGTTCCTACTGCTGCCGATATCGAAATTGCCGCCGGACTTCTTCCCGATCACCTGCCGCACCTGCGTCGACTACACCAA
TACGCTCGCCGACATCACCGTCGGTTATATGGGCGGACGCGGCGAGCAGTGGTTGCTGGTGCGCAACGAGCGCGGCGAGG
AGCTGCTGAAGCTGCTCGGCGACGACGTTCGCTTAAGCGAGCCGACCAGCGCGGGCAATCGCGTCGCACCGGTGAAGGGC
TTCCTCAAGAACACCGAACTCGCTGCCGGCGGACTGCCGGTGCGCGGCATGCCGAACTGGCTGCGGCCGTTCATGGGATG
GCTGATGCCGAAAGTCGGCCCGCGCGGAATTGAATTCGCGCGTGCGCGTGTCGAGATGAAGGCGGTCGAGACCGTGCTGC
ATCTGCGCCGGCACTACAAACACAAAATGAAGAACATGATACCCGCCCATGTCTGGGCCCTGGTAAAGCCCTATGGGCTC
GAGCCGCAAGACGGCGAGCGCCGCGACTAA

Upstream 100 bases:

>100_bases
TGACGCAGATCTATCGGTCGCCCGGCTTTGGCTCTATTGATCGAGAGAGAAACTTAAGGCGAATGGCGAGGCCATTGGCC
GGTTCCTACAAGACGCGCCC

Downstream 100 bases:

>100_bases
TAACTTTCCGTGCCACGGTTCCTGCCCGGAACCGAGTTTCCAGATCCAGGTTATCGCGCGCGAGGTGTGCGGCGTCGCCG
CTCGCCGATCGATCAACCGA

Product: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain-containing protein

Products: reduced coenzyme F420

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MHDRNTPSALWTPPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPAMERRVHGRNRDAATGDEAFFGPYRRMVQA
AMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGY
KRLAVIGVPCQIYALRRLQDQLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAI
PFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMGGRGEQWLLVRNERGEELLKLLGDDVRLSEPTSAGNRVAPVKG
FLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGIEFARARVEMKAVETVLHLRRHYKHKMKNMIPAHVWALVKPYGL
EPQDGERRD

Sequences:

>Translated_409_residues
MHDRNTPSALWTPPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPAMERRVHGRNRDAATGDEAFFGPYRRMVQA
AMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGY
KRLAVIGVPCQIYALRRLQDQLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAI
PFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMGGRGEQWLLVRNERGEELLKLLGDDVRLSEPTSAGNRVAPVKG
FLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGIEFARARVEMKAVETVLHLRRHYKHKMKNMIPAHVWALVKPYGL
EPQDGERRD
>Mature_409_residues
MHDRNTPSALWTPPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPAMERRVHGRNRDAATGDEAFFGPYRRMVQA
AMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSDKWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGY
KRLAVIGVPCQIYALRRLQDQLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAI
PFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMGGRGEQWLLVRNERGEELLKLLGDDVRLSEPTSAGNRVAPVKG
FLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGIEFARARVEMKAVETVLHLRRHYKHKMKNMIPAHVWALVKPYGL
EPQDGERRD

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007516
- InterPro:   IPR007525 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: 1.12.98.1

Molecular weight: Translated: 45833; Mature: 45833

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDRNTPSALWTPPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPAMERRVHGRN
CCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC
RDAATGDEAFFGPYRRMVQAAMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSD
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCC
KWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQD
CCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
QLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAI
HHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECCCCEEEE
PFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMGGRGEQWLLVRNERGEELLKLLG
HHEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHC
DDVRLSEPTSAGNRVAPVKGFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGIEFA
CCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHH
RARVEMKAVETVLHLRRHYKHKMKNMIPAHVWALVKPYGLEPQDGERRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHDRNTPSALWTPPLNAPAERELCTDCGVSRMSDPKQCGQACQFIKPDYPAMERRVHGRN
CCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC
RDAATGDEAFFGPYRRMVQAAMKQPREEAQWTGITTTIAQRLLETGAVDAVIAMAPDPSD
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCC
KWKPMPVLVTKPEGMAQCRGMRMGYAPSLALIEPAIAAGYKRLAVIGVPCQIYALRRLQD
CCCCCCEEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
QLGLEKLYVIGTPCSDNTTTEAFHGFLDLLSDKPETITYLEFRADYHVELRFDDGNVKAI
HHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECCCCEEEE
PFLLLPISKLPPDFFPITCRTCVDYTNTLADITVGYMGGRGEQWLLVRNERGEELLKLLG
HHEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHHC
DDVRLSEPTSAGNRVAPVKGFLKNTELAAGGLPVRGMPNWLRPFMGWLMPKVGPRGIEFA
CCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHH
RARVEMKAVETVLHLRRHYKHKMKNMIPAHVWALVKPYGLEPQDGERRD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]